Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000526-TA|BGIBMGA000526-PA|IPR002059|Cold-shock protein,
DNA-binding, IPR008994|Nucleic acid-binding, OB-fold, IPR011129|Cold
shock protein
(259 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 158 2e-38
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 158 2e-38
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 158 2e-38
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 158 2e-38
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 158 2e-38
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 158 2e-38
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 158 2e-38
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 158 2e-38
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 158 2e-38
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 157 3e-38
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 157 3e-38
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 157 3e-38
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 157 3e-38
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 157 3e-38
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 157 3e-38
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 157 3e-38
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 157 3e-38
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 157 3e-38
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 157 3e-38
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 157 3e-38
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 157 3e-38
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 157 3e-38
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 157 3e-38
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 157 3e-38
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 157 3e-38
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 157 3e-38
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 157 4e-38
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 157 4e-38
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 151 2e-36
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 151 2e-36
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 151 2e-36
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 150 6e-36
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 91 3e-18
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 65 3e-10
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 65 3e-10
BC141960-1|AAI41961.1| 227|Homo sapiens Unknown (protein for IM... 65 3e-10
BC127713-1|AAI27714.1| 227|Homo sapiens Unknown (protein for IM... 65 3e-10
BC127712-1|AAI27713.1| 227|Homo sapiens Unknown (protein for IM... 65 3e-10
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 65 3e-10
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 65 3e-10
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 60 1e-08
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 60 1e-08
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 60 1e-08
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 60 1e-08
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 5.3
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 5.3
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 5.3
CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein. 31 5.3
BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein. 31 5.3
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 5.3
AL023553-5|CAB46024.1| 153|Homo sapiens protein ( Human DNA seq... 31 5.3
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 5.3
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 5.3
AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIP... 31 5.3
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 158 bits (384), Expect = 2e-38
Identities = 75/98 (76%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 130
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 158 bits (384), Expect = 2e-38
Identities = 75/98 (76%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 130
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 158 bits (384), Expect = 2e-38
Identities = 75/98 (76%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 215
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 130
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 216 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 252
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 158 bits (384), Expect = 2e-38
Identities = 75/98 (76%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 130
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 158 bits (384), Expect = 2e-38
Identities = 75/98 (76%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 130
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 158 bits (384), Expect = 2e-38
Identities = 75/98 (76%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 130
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 158 bits (384), Expect = 2e-38
Identities = 75/98 (76%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 130
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 158 bits (384), Expect = 2e-38
Identities = 75/98 (76%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 130
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 158 bits (384), Expect = 2e-38
Identities = 75/98 (76%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 78
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 130
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 79 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 115
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 112
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 113 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 147
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 111 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 145
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 153
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 154 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 188
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 157 bits (382), Expect = 3e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 157 bits (381), Expect = 4e-38
Identities = 75/97 (77%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 114 VEGEKGEEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 157 bits (381), Expect = 4e-38
Identities = 74/98 (75%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RS+GDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDV 145
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 130
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 151 bits (366), Expect = 2e-36
Identities = 70/91 (76%), Positives = 78/91 (85%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 123
V GEKG EA VTGPGG PVKGS YA ++R+
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRK 179
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 151 bits (366), Expect = 2e-36
Identities = 70/91 (76%), Positives = 78/91 (85%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 123
V GEKG EA VTGPGG PVKGS YA ++R+
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRK 179
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 151 bits (366), Expect = 2e-36
Identities = 70/91 (76%), Positives = 78/91 (85%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 123
V GEKG EA VTGPGG PVKGS YA ++R+
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRK 179
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 150 bits (363), Expect = 6e-36
Identities = 71/97 (73%), Positives = 81/97 (83%), Gaps = 2/97 (2%)
Query: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 92
VIA KV GTVKWFNV++GYGFI+RNDTKEDVFVH TA +NNPRK +RSVGDGE VEF V
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDV 109
Query: 93 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQY 129
V GEKG +AA VTGPGG PV+GS YAAD R ++R+Y
Sbjct: 110 VEGEKGAKAANVTGPGGVPVQGSKYAAD--RNHYRRY 144
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 91.5 bits (217), Expect = 3e-18
Identities = 43/61 (70%), Positives = 49/61 (80%)
Query: 63 VFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 122
+F +QTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 82
Query: 123 R 123
+
Sbjct: 83 K 83
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 64.9 bits (151), Expect = 3e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 39 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 91
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 92 VVAGEKGFEAAGVTGPGGEPVKGS 115
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 64.9 bits (151), Expect = 3e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 39 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 91
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 92 VVAGEKGFEAAGVTGPGGEPVKGS 115
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>BC141960-1|AAI41961.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127313) protein.
Length = 227
Score = 64.9 bits (151), Expect = 3e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 39 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 91
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 92 VVAGEKGFEAAGVTGPGGEPVKGS 115
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC127713-1|AAI27714.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127309) protein.
Length = 227
Score = 64.9 bits (151), Expect = 3e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 39 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 91
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 92 VVAGEKGFEAAGVTGPGGEPVKGS 115
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC127712-1|AAI27713.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127308) protein.
Length = 227
Score = 64.9 bits (151), Expect = 3e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 39 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 91
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 92 VVAGEKGFEAAGVTGPGGEPVKGS 115
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 64.9 bits (151), Expect = 3e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 39 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 91
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 92 VVAGEKGFEAAGVTGPGGEPVKGS 115
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 64.9 bits (151), Expect = 3e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 39 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 91
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 92 VVAGEKGFEAAGVTGPGGEPVKGS 115
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 59.7 bits (138), Expect = 1e-08
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Query: 39 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 91
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 92 VVAGEKGFEAAGVTGPGG 109
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 59.7 bits (138), Expect = 1e-08
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Query: 39 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 91
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 92 VVAGEKGFEAAGVTGPGG 109
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 59.7 bits (138), Expect = 1e-08
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Query: 39 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 91
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 92 VVAGEKGFEAAGVTGPGG 109
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 59.7 bits (138), Expect = 1e-08
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Query: 39 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 91
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 92 VVAGEKGFEAAGVTGPGG 109
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 95 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 124
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 95 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 124
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 95 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 124
GE+GF G+ GP GEP K P A RG
Sbjct: 544 GERGFP--GLPGPSGEPGKQGPSGASGERG 571
>CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein.
Length = 153
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 40 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 70
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein.
Length = 153
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 40 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 70
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 95 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 124
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>AL023553-5|CAB46024.1| 153|Homo sapiens protein ( Human DNA
sequence from clone RP3-347H13 on chromosome 22. ).
Length = 153
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 40 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 70
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 95 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 124
GE+GF G+ GP GEP K P A RG
Sbjct: 965 GERGFP--GLPGPSGEPGKQGPSGASGERG 992
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 95 GEKGFEAAGVTGPGGEPVKGSPYAADKRRG 124
GE+GF G+ GP GEP K P A RG
Sbjct: 971 GERGFP--GLPGPSGEPGKQGPSGASGERG 998
>AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIPPin
protein.
Length = 153
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 40 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 70
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.309 0.126 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,128,460
Number of Sequences: 224733
Number of extensions: 604295
Number of successful extensions: 1422
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1357
Number of HSP's gapped (non-prelim): 60
length of query: 259
length of database: 73,234,838
effective HSP length: 88
effective length of query: 171
effective length of database: 53,458,334
effective search space: 9141375114
effective search space used: 9141375114
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 64 (29.9 bits)
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