GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000525-TA|BGIBMGA000525-PA|undefined
         (60 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   1.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    19   2.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    19   2.9  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    19   2.9  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    19   2.9  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    19   5.1  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    19   5.1  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    19   5.1  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    19   5.1  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    19   5.1  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    19   5.1  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    19   5.1  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     19   5.1  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    18   9.0  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    18   9.0  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    18   9.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    18   9.0  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 1.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 43  SNPNCLYSGR 52
           +NP CL+ GR
Sbjct: 548 NNPECLFDGR 557


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 19.4 bits (38), Expect = 2.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 12  VLFYPYGRFPVSWN 25
           VLFYP+    VS+N
Sbjct: 173 VLFYPFLPSDVSYN 186


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 19.4 bits (38), Expect = 2.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 12  VLFYPYGRFPVSWN 25
           VLFYP+    VS+N
Sbjct: 129 VLFYPFLPSDVSYN 142


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.4 bits (38), Expect = 2.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)

Query: 8   YVQPVLFYPY 17
           Y+ P+L+Y Y
Sbjct: 347 YIPPILYYNY 356


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.4 bits (38), Expect = 2.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)

Query: 8   YVQPVLFYPY 17
           Y+ P+L+Y Y
Sbjct: 347 YIPPILYYNY 356


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 3   NDPYLYVQPVLFYPYGRFPVSW 24
           N   LYV P +F    +  ++W
Sbjct: 113 NGSCLYVPPGIFKSTCKMDITW 134


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 3   NDPYLYVQPVLFYPYGRFPVSW 24
           N   LYV P +F    +  ++W
Sbjct: 113 NGSCLYVPPGIFKSTCKIDITW 134


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 212

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 13 LFYPYGRFPVSWNAS 27
          LF P+G+F    NA+
Sbjct: 3  LFMPFGKFESLRNAA 17


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 101

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 13 LFYPYGRFPVSWNAS 27
          LF P+G+F    NA+
Sbjct: 18 LFMPFGKFESLRNAA 32


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 13  LFYPYGRFPVSWNAS 27
           LF P+G+F    NA+
Sbjct: 236 LFMPFGKFESLRNAA 250


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 13  LFYPYGRFPVSWNAS 27
           LF P+G+F    NA+
Sbjct: 236 LFMPFGKFESLRNAA 250


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 13  LFYPYGRFPVSWNAS 27
           LF P+G+F    NA+
Sbjct: 236 LFMPFGKFESLRNAA 250


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund
          protein.
          Length = 301

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 7/28 (25%), Positives = 16/28 (57%)

Query: 16 PYGRFPVSWNASNQHMKRERSNTQALES 43
          P  R PV  + +  H+++++   Q L++
Sbjct: 41 PPKRAPVGLSLAASHLQQQQLKKQRLDN 68


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 17.8 bits (34), Expect = 9.0
 Identities = 6/18 (33%), Positives = 10/18 (55%)

Query: 7   LYVQPVLFYPYGRFPVSW 24
           LYV P +F    +  ++W
Sbjct: 117 LYVPPGIFKSTCKMDITW 134


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 17.8 bits (34), Expect = 9.0
 Identities = 6/18 (33%), Positives = 10/18 (55%)

Query: 7   LYVQPVLFYPYGRFPVSW 24
           LYV P +F    +  ++W
Sbjct: 117 LYVPPGIFKSTCKMDITW 134


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 17.8 bits (34), Expect = 9.0
 Identities = 6/18 (33%), Positives = 10/18 (55%)

Query: 7   LYVQPVLFYPYGRFPVSW 24
           LYV P +F    +  ++W
Sbjct: 117 LYVPPGIFKSTCKMDITW 134


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
          transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 17.8 bits (34), Expect = 9.0
 Identities = 7/12 (58%), Positives = 7/12 (58%)

Query: 10 QPVLFYPYGRFP 21
          QP    PY RFP
Sbjct: 73 QPPQGMPYPRFP 84


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.134    0.435 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,209
Number of Sequences: 317
Number of extensions: 556
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of query: 60
length of database: 114,650
effective HSP length: 40
effective length of query: 20
effective length of database: 101,970
effective search space:  2039400
effective search space used:  2039400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.7 bits)
S2: 34 (17.8 bits)