BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000525-TA|BGIBMGA000525-PA|undefined (60 letters) Database: human 224,733 sequences; 73,234,838 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC111525-1|AAI11526.1| 580|Homo sapiens solute carrier family 5... 31 0.57 BC111524-1|AAI11525.1| 333|Homo sapiens SLC5A7 protein protein. 31 0.57 AJ401466-1|CAC03717.1| 580|Homo sapiens high affinity choline t... 31 0.57 AJ308378-1|CAC88115.1| 580|Homo sapiens high affinity choline t... 31 0.57 AF276871-1|AAG25940.1| 580|Homo sapiens high affinity choline t... 31 0.57 AC009963-1|AAY14927.1| 580|Homo sapiens unknown protein. 31 0.57 AB043997-1|BAB18161.1| 580|Homo sapiens high-affinity choline t... 31 0.57 U14187-1|AAC50078.1| 238|Homo sapiens LERK-3 protein. 29 3.0 L37360-1|AAA52368.1| 234|Homo sapiens EHK1 receptor tyrosine ki... 29 3.0 BC110406-1|AAI10407.1| 238|Homo sapiens ephrin-A3 protein. 29 3.0 BC017722-1|AAH17722.1| 238|Homo sapiens ephrin-A3 protein. 29 3.0 AL691442-3|CAI15318.1| 238|Homo sapiens ephrin-A3 protein. 29 3.0 L29222-1|AAB59459.1| 136|Homo sapiens clk1 protein. 28 5.3 L29219-1|AAA61480.1| 484|Homo sapiens clk1 protein. 28 5.3 BC031549-1|AAH31549.1| 484|Homo sapiens CDC-like kinase 1 protein. 28 5.3 BC028149-1|AAH28149.1| 136|Homo sapiens CDC-like kinase 1 protein. 28 5.3 AC005037-5|AAY14722.1| 484|Homo sapiens unknown protein. 28 5.3 >BC111525-1|AAI11526.1| 580|Homo sapiens solute carrier family 5 (choline transporter), member 7 protein. Length = 580 Score = 31.1 bits (67), Expect = 0.57 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Query: 4 DPYLYVQPVLFYPYGRFPVSWNASNQ 29 +PYLY+QP++FYP G +P NQ Sbjct: 451 EPYLYLQPLIFYP-GYYPDDNGIYNQ 475 >BC111524-1|AAI11525.1| 333|Homo sapiens SLC5A7 protein protein. Length = 333 Score = 31.1 bits (67), Expect = 0.57 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Query: 4 DPYLYVQPVLFYPYGRFPVSWNASNQ 29 +PYLY+QP++FYP G +P NQ Sbjct: 204 EPYLYLQPLIFYP-GYYPDDNGIYNQ 228 >AJ401466-1|CAC03717.1| 580|Homo sapiens high affinity choline transporter protein. Length = 580 Score = 31.1 bits (67), Expect = 0.57 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Query: 4 DPYLYVQPVLFYPYGRFPVSWNASNQ 29 +PYLY+QP++FYP G +P NQ Sbjct: 451 EPYLYLQPLIFYP-GYYPDDNGIYNQ 475 >AJ308378-1|CAC88115.1| 580|Homo sapiens high affinity choline transporter protein. Length = 580 Score = 31.1 bits (67), Expect = 0.57 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Query: 4 DPYLYVQPVLFYPYGRFPVSWNASNQ 29 +PYLY+QP++FYP G +P NQ Sbjct: 451 EPYLYLQPLIFYP-GYYPDDNGIYNQ 475 >AF276871-1|AAG25940.1| 580|Homo sapiens high affinity choline transporter protein. Length = 580 Score = 31.1 bits (67), Expect = 0.57 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Query: 4 DPYLYVQPVLFYPYGRFPVSWNASNQ 29 +PYLY+QP++FYP G +P NQ Sbjct: 451 EPYLYLQPLIFYP-GYYPDDNGIYNQ 475 >AC009963-1|AAY14927.1| 580|Homo sapiens unknown protein. Length = 580 Score = 31.1 bits (67), Expect = 0.57 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Query: 4 DPYLYVQPVLFYPYGRFPVSWNASNQ 29 +PYLY+QP++FYP G +P NQ Sbjct: 451 EPYLYLQPLIFYP-GYYPDDNGIYNQ 475 >AB043997-1|BAB18161.1| 580|Homo sapiens high-affinity choline transporter CHT1 protein. Length = 580 Score = 31.1 bits (67), Expect = 0.57 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Query: 4 DPYLYVQPVLFYPYGRFPVSWNASNQ 29 +PYLY+QP++FYP G +P NQ Sbjct: 451 EPYLYLQPLIFYP-GYYPDDNGIYNQ 475 >U14187-1|AAC50078.1| 238|Homo sapiens LERK-3 protein. Length = 238 Score = 28.7 bits (61), Expect = 3.0 Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 19 RFPVSWNASNQHMKRERSNTQ 39 R V WN+SNQH++RE Q Sbjct: 32 RHAVYWNSSNQHLRREGYTVQ 52 >L37360-1|AAA52368.1| 234|Homo sapiens EHK1 receptor tyrosine kinase ligand protein. Length = 234 Score = 28.7 bits (61), Expect = 3.0 Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 19 RFPVSWNASNQHMKRERSNTQ 39 R V WN+SNQH++RE Q Sbjct: 32 RHAVYWNSSNQHLRREGYTVQ 52 >BC110406-1|AAI10407.1| 238|Homo sapiens ephrin-A3 protein. Length = 238 Score = 28.7 bits (61), Expect = 3.0 Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 19 RFPVSWNASNQHMKRERSNTQ 39 R V WN+SNQH++RE Q Sbjct: 32 RHAVYWNSSNQHLRREGYTVQ 52 >BC017722-1|AAH17722.1| 238|Homo sapiens ephrin-A3 protein. Length = 238 Score = 28.7 bits (61), Expect = 3.0 Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 19 RFPVSWNASNQHMKRERSNTQ 39 R V WN+SNQH++RE Q Sbjct: 32 RHAVYWNSSNQHLRREGYTVQ 52 >AL691442-3|CAI15318.1| 238|Homo sapiens ephrin-A3 protein. Length = 238 Score = 28.7 bits (61), Expect = 3.0 Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 19 RFPVSWNASNQHMKRERSNTQ 39 R V WN+SNQH++RE Q Sbjct: 32 RHAVYWNSSNQHLRREGYTVQ 52 >L29222-1|AAB59459.1| 136|Homo sapiens clk1 protein. Length = 136 Score = 27.9 bits (59), Expect = 5.3 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Query: 24 WNASNQHMKRERSNTQALESNPNCLYS 50 W +S+ H +R+RS++ A E N C Y+ Sbjct: 22 WRSSSSHKRRKRSHSSAQE-NKRCKYN 47 >L29219-1|AAA61480.1| 484|Homo sapiens clk1 protein. Length = 484 Score = 27.9 bits (59), Expect = 5.3 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Query: 24 WNASNQHMKRERSNTQALESNPNCLYS 50 W +S+ H +R+RS++ A E N C Y+ Sbjct: 22 WRSSSSHKRRKRSHSSAQE-NKRCKYN 47 >BC031549-1|AAH31549.1| 484|Homo sapiens CDC-like kinase 1 protein. Length = 484 Score = 27.9 bits (59), Expect = 5.3 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Query: 24 WNASNQHMKRERSNTQALESNPNCLYS 50 W +S+ H +R+RS++ A E N C Y+ Sbjct: 22 WRSSSSHKRRKRSHSSAQE-NKRCKYN 47 >BC028149-1|AAH28149.1| 136|Homo sapiens CDC-like kinase 1 protein. Length = 136 Score = 27.9 bits (59), Expect = 5.3 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Query: 24 WNASNQHMKRERSNTQALESNPNCLYS 50 W +S+ H +R+RS++ A E N C Y+ Sbjct: 22 WRSSSSHKRRKRSHSSAQE-NKRCKYN 47 >AC005037-5|AAY14722.1| 484|Homo sapiens unknown protein. Length = 484 Score = 27.9 bits (59), Expect = 5.3 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Query: 24 WNASNQHMKRERSNTQALESNPNCLYS 50 W +S+ H +R+RS++ A E N C Y+ Sbjct: 22 WRSSSSHKRRKRSHSSAQE-NKRCKYN 47 Database: human Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 73,234,838 Number of sequences in database: 224,733 Lambda K H 0.322 0.134 0.435 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,144,167 Number of Sequences: 224733 Number of extensions: 315497 Number of successful extensions: 543 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 531 Number of HSP's gapped (non-prelim): 17 length of query: 60 length of database: 73,234,838 effective HSP length: 40 effective length of query: 20 effective length of database: 64,245,518 effective search space: 1284910360 effective search space used: 1284910360 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 57 (27.1 bits)
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