BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000525-TA|BGIBMGA000525-PA|undefined (60 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 26 2.7 AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 26 2.7 AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 26 2.7 AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 26 2.7 AF067937-5|AAF99917.2| 422|Caenorhabditis elegans Hypothetical ... 26 3.6 Z81030-2|CAB02704.2| 343|Caenorhabditis elegans Hypothetical pr... 25 4.8 Z48717-6|CAA88608.2| 124|Caenorhabditis elegans Hypothetical pr... 25 4.8 U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 25 4.8 AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 25 6.3 >AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical protein T08B2.5f protein. Length = 838 Score = 26.2 bits (55), Expect = 2.7 Identities = 9/23 (39%), Positives = 16/23 (69%) Query: 24 WNASNQHMKRERSNTQALESNPN 46 W++SN+H +R RS + + E + N Sbjct: 89 WSSSNRHSRRRRSRSYSRERDRN 111 >AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical protein T08B2.5c protein. Length = 866 Score = 26.2 bits (55), Expect = 2.7 Identities = 9/23 (39%), Positives = 16/23 (69%) Query: 24 WNASNQHMKRERSNTQALESNPN 46 W++SN+H +R RS + + E + N Sbjct: 117 WSSSNRHSRRRRSRSYSRERDRN 139 >AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical protein T08B2.5a protein. Length = 924 Score = 26.2 bits (55), Expect = 2.7 Identities = 9/23 (39%), Positives = 16/23 (69%) Query: 24 WNASNQHMKRERSNTQALESNPN 46 W++SN+H +R RS + + E + N Sbjct: 175 WSSSNRHSRRRRSRSYSRERDRN 197 >AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical protein T08B2.5b protein. Length = 925 Score = 26.2 bits (55), Expect = 2.7 Identities = 9/23 (39%), Positives = 16/23 (69%) Query: 24 WNASNQHMKRERSNTQALESNPN 46 W++SN+H +R RS + + E + N Sbjct: 176 WSSSNRHSRRRRSRSYSRERDRN 198 >AF067937-5|AAF99917.2| 422|Caenorhabditis elegans Hypothetical protein F22F7.2 protein. Length = 422 Score = 25.8 bits (54), Expect = 3.6 Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 9 VQPVLFYPYGRFPVSWNA 26 V+PV F P+ RF WNA Sbjct: 263 VKPVRFTPFTRFESRWNA 280 >Z81030-2|CAB02704.2| 343|Caenorhabditis elegans Hypothetical protein C01G10.2 protein. Length = 343 Score = 25.4 bits (53), Expect = 4.8 Identities = 9/28 (32%), Positives = 15/28 (53%) Query: 24 WNASNQHMKRERSNTQALESNPNCLYSG 51 WN + +H+ R ++ L SN + Y G Sbjct: 150 WNVATEHLSRSENSNFMLFSNEHLAYIG 177 >Z48717-6|CAA88608.2| 124|Caenorhabditis elegans Hypothetical protein T10B9.9 protein. Length = 124 Score = 25.4 bits (53), Expect = 4.8 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 6 YLYVQPVLFYPYGRFPVSWNASNQHMKRERSNTQALESNPNCLYSGR 52 Y+ Q LF GR VS +A Q R+RS+ + + S +CL+ R Sbjct: 57 YIGSQMRLFDDRGR-EVSCDAEKQQEIRQRSDRRCIFSPIHCLFDRR 102 >U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical protein F23F12.3 protein. Length = 522 Score = 25.4 bits (53), Expect = 4.8 Identities = 10/34 (29%), Positives = 19/34 (55%) Query: 22 VSWNASNQHMKRERSNTQALESNPNCLYSGRSLF 55 +SW + +++RE T+ +E +Y+ R LF Sbjct: 266 ISWLSGISYVEREDRRTEKIEEKDTKVYTIRDLF 299 >AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse transcriptase protein. Length = 1066 Score = 25.0 bits (52), Expect = 6.3 Identities = 10/19 (52%), Positives = 12/19 (63%) Query: 30 HMKRERSNTQALESNPNCL 48 H + R T AL SNP+CL Sbjct: 49 HYRVSRDTTFALNSNPSCL 67 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.322 0.134 0.435 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,689,100 Number of Sequences: 27539 Number of extensions: 52674 Number of successful extensions: 88 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 80 Number of HSP's gapped (non-prelim): 9 length of query: 60 length of database: 12,573,161 effective HSP length: 41 effective length of query: 19 effective length of database: 11,444,062 effective search space: 217437178 effective search space used: 217437178 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 51 (24.6 bits)
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