Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000524-TA|BGIBMGA000524-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
(209 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 124 4e-29
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 124 4e-29
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 112 1e-25
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 70 1e-12
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 68 4e-12
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 68 5e-12
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 68 5e-12
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 67 7e-12
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 67 9e-12
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 62 3e-10
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 62 3e-10
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 61 5e-10
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 61 6e-10
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 61 6e-10
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 61 6e-10
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 60 8e-10
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 60 1e-09
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 60 1e-09
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 60 1e-09
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 59 2e-09
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 57 1e-08
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 57 1e-08
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 56 2e-08
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 53 1e-07
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 53 2e-07
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 53 2e-07
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 52 2e-07
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 52 3e-07
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 52 3e-07
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 52 3e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 52 3e-07
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 52 3e-07
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 52 4e-07
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 52 4e-07
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 50 9e-07
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 50 9e-07
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 50 9e-07
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 50 1e-06
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 50 1e-06
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 49 3e-06
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 48 6e-06
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 47 1e-05
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 47 1e-05
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 47 1e-05
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 47 1e-05
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 47 1e-05
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 46 2e-05
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 46 2e-05
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 45 3e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 45 4e-05
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 44 6e-05
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 44 6e-05
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 44 8e-05
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 44 8e-05
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 44 1e-04
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 43 1e-04
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 43 1e-04
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 43 1e-04
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 43 2e-04
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 43 2e-04
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 42 2e-04
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 42 2e-04
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 42 2e-04
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 42 2e-04
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 42 2e-04
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 42 3e-04
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 42 3e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 41 5e-04
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 41 5e-04
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 41 5e-04
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 40 0.001
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 40 0.001
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 40 0.001
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 40 0.001
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 40 0.001
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 40 0.001
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 40 0.001
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 40 0.002
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 40 0.002
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 40 0.002
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 39 0.002
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 39 0.002
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 39 0.002
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 39 0.003
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 39 0.003
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 39 0.003
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 38 0.005
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 38 0.005
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 38 0.005
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 38 0.005
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 38 0.005
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 38 0.005
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 38 0.005
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 38 0.007
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 38 0.007
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 38 0.007
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 37 0.009
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 37 0.009
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 37 0.009
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 37 0.011
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 37 0.011
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 37 0.011
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 36 0.015
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 36 0.015
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 36 0.015
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 36 0.015
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 36 0.015
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 36 0.015
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 36 0.015
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 36 0.020
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 36 0.020
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 36 0.020
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 36 0.020
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 36 0.026
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 36 0.026
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 35 0.035
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 35 0.035
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 35 0.035
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 35 0.035
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 35 0.046
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 35 0.046
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 34 0.061
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 34 0.081
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 34 0.081
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 34 0.081
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 34 0.081
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 34 0.081
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 34 0.081
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 34 0.081
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 34 0.081
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 34 0.081
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 34 0.081
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 33 0.11
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 33 0.11
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 33 0.11
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 33 0.11
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 33 0.11
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 33 0.11
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 33 0.11
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 33 0.14
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 33 0.14
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 33 0.19
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 33 0.19
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 33 0.19
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 33 0.19
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 32 0.25
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 32 0.25
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 32 0.32
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 32 0.32
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 31 0.43
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 31 0.43
At1g01770.1 68414.m00096 expressed protein 31 0.43
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 31 0.57
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 31 0.57
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 31 0.57
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 31 0.57
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 31 0.57
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 31 0.57
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 31 0.57
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 31 0.75
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 31 0.75
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 31 0.75
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 31 0.75
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 31 0.75
At1g65580.1 68414.m07439 endonuclease/exonuclease/phosphatase fa... 31 0.75
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 31 0.75
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 30 0.99
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 30 0.99
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 30 0.99
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 30 0.99
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 30 1.3
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 30 1.3
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 30 1.3
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 30 1.3
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 29 1.7
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 29 1.7
At2g26610.1 68415.m03193 expressed protein ; expression support... 29 1.7
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 29 1.7
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 29 1.7
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 29 2.3
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 29 2.3
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 29 3.0
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 29 3.0
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 29 3.0
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 29 3.0
At3g17320.1 68416.m02214 F-box family protein contains F-box dom... 28 4.0
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 28 4.0
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 28 4.0
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 28 4.0
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 28 4.0
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 28 4.0
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 28 4.0
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 28 4.0
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 28 5.3
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 28 5.3
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 28 5.3
At1g26330.1 68414.m03211 hypothetical protein 28 5.3
At1g11290.1 68414.m01297 pentatricopeptide (PPR) repeat-containi... 28 5.3
At5g45410.1 68418.m05580 expressed protein similar to unknown pr... 27 7.0
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 27 7.0
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 27 7.0
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 27 7.0
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 27 7.0
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 27 7.0
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 27 7.0
At2g17525.1 68415.m02027 pentatricopeptide (PPR) repeat-containi... 27 7.0
At1g32140.1 68414.m03954 F-box family protein contains F-box dom... 27 7.0
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 27 7.0
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 27 7.0
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 27 9.2
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 27 9.2
At2g46040.1 68415.m05727 ARID/BRIGHT DNA-binding domain-containi... 27 9.2
At2g17830.1 68415.m02065 F-box family protein contains Pfam doma... 27 9.2
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 124 bits (299), Expect = 4e-29
Identities = 56/155 (36%), Positives = 95/155 (61%), Gaps = 8/155 (5%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
+TL+GH KV S+ ++ + V+ S DG+LI+W+ + K I L AWVM+ AF+P+
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 113 GNFVACGGMDNMCTVYDVNN-RDATGAAKMVRELAGYEGFLSSCRFL--DDTHILTGSGD 169
G VACGG+D++C+++ +++ D G + R L G+ G++S C+++ +D H++T SGD
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGD 178
Query: 170 MKICVWDLEAGKREMEF-----DAHAGDVVSISLS 199
+WD+ G + F H DV+S+S+S
Sbjct: 179 QTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSIS 213
Score = 41.1 bits (92), Expect = 5e-04
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL----RSAWVMSVA 108
+T GH VN+V + D TGS DG ++D +G+++Q+ + V S+A
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 109 FAPSGNFVACG-GMDNMCTVYD 129
F+ SG + G +N C V+D
Sbjct: 302 FSVSGRLLFAGYASNNTCYVWD 323
Score = 38.7 bits (86), Expect = 0.003
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 57 GHLNKVNSVHYSGDSRHC-VTGSLDGKLIIWDTWSGNK-VQIIPLRSAWVMSVAFAPSGN 114
GH V SV SG + + ++GS D +WDT + ++ V+ V +V F P G
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 115 FVACGGMDNMCTVYDVNNRDATGAAKMVREL--AGYEGFLSSCRFLDDTHIL-TGSGDMK 171
G D C +YD+ TG V + G G ++S F +L G
Sbjct: 262 RFGTGSDDGTCRLYDIR----TGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNN 317
Query: 172 IC-VWDLEAGK 181
C VWD G+
Sbjct: 318 TCYVWDTLLGE 328
Score = 30.3 bits (65), Expect = 0.99
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 164 LTGSGDMKICVWDLEAGKREME-FDAHAGDVVSISLSPD 201
++GS D +WD A R + F H GDV ++ PD
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPD 259
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 124 bits (299), Expect = 4e-29
Identities = 56/155 (36%), Positives = 95/155 (61%), Gaps = 8/155 (5%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
+TL+GH KV S+ ++ + V+ S DG+LI+W+ + K I L AWVM+ AF+P+
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 113 GNFVACGGMDNMCTVYDVNN-RDATGAAKMVRELAGYEGFLSSCRFL--DDTHILTGSGD 169
G VACGG+D++C+++ +++ D G + R L G+ G++S C+++ +D H++T SGD
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGD 178
Query: 170 MKICVWDLEAGKREMEF-----DAHAGDVVSISLS 199
+WD+ G + F H DV+S+S+S
Sbjct: 179 QTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSIS 213
Score = 41.5 bits (93), Expect = 4e-04
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL----RSAWVMSVA 108
+T GH VN+V + D TGS DG ++D +G+++Q+ + V S+A
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 109 FAPSGNFVACG-GMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF-LDDTHILTG 166
F+ SG + G +N C V+D + + ++ + +S D + + TG
Sbjct: 302 FSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD--SHRNRISCLGLSADGSALCTG 359
Query: 167 SGDMKICVWDLEAGKR 182
S D + +W +R
Sbjct: 360 SWDSNLKIWAFGGHRR 375
Score = 30.3 bits (65), Expect = 0.99
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 164 LTGSGDMKICVWDLEAGKREME-FDAHAGDVVSISLSPD 201
++GS D +WD A R + F H GDV ++ PD
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPD 259
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 112 bits (270), Expect = 1e-25
Identities = 51/147 (34%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
Query: 61 KVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGG 120
+V S+ ++ + V+ S DG+LI+W+ + K I L AWVM+ AF+P+G VACGG
Sbjct: 5 QVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGG 64
Query: 121 MDNMCTVYDVNN-RDATGAAKMVRELAGYEGFLSSCRFL--DDTHILTGSGDMKICVWDL 177
+D++C+++ +++ D G + R L G+ G++S C+++ +D H++T SGD +WD+
Sbjct: 65 LDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDV 124
Query: 178 EAGKREMEF-----DAHAGDVVSISLS 199
G + F H DV+S+S+S
Sbjct: 125 TTGLKTSVFGGEFQSGHTADVLSVSIS 151
Score = 41.5 bits (93), Expect = 4e-04
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL----RSAWVMSVA 108
+T GH VN+V + D TGS DG ++D +G+++Q+ + V S+A
Sbjct: 180 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 239
Query: 109 FAPSGNFVACG-GMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF-LDDTHILTG 166
F+ SG + G +N C V+D + + ++ + +S D + + TG
Sbjct: 240 FSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD--SHRNRISCLGLSADGSALCTG 297
Query: 167 SGDMKICVWDLEAGKR 182
S D + +W +R
Sbjct: 298 SWDSNLKIWAFGGHRR 313
Score = 30.3 bits (65), Expect = 0.99
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 164 LTGSGDMKICVWDLEAGKREME-FDAHAGDVVSISLSPD 201
++GS D +WD A R + F H GDV ++ PD
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPD 197
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 69.7 bits (163), Expect = 1e-12
Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 10/191 (5%)
Query: 16 TDLISKVKADQ-EKLADAKLAEKCSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHC 74
T + V D E L A + L DV + + V + GH + ++V +
Sbjct: 58 TSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMV--RAFTGHRSNCSAVEFHPFGEFL 115
Query: 75 VTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRD 134
+GS D L IWD +Q S + ++ F P G +V GG+DN+ V+D+
Sbjct: 116 ASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLT--- 172
Query: 135 ATGAAKMVRELAGYEGFLSSCRFLDDTHIL-TGSGDMKICVWDLEAGKREMEFDAHAGDV 193
A K++ E +EG + S F +L TGS D + WDLE + A V
Sbjct: 173 ---AGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGV 229
Query: 194 VSISLSPDYHT 204
SI PD T
Sbjct: 230 RSIKFHPDGRT 240
Score = 64.5 bits (150), Expect = 5e-11
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
+L GH + V+SV + + G+ G + +WD V+ + +V F P G
Sbjct: 53 SLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFG 112
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH-ILTGSGDMKI 172
F+A G D ++D+ + ++ G+ +S+ RF D +++G D +
Sbjct: 113 EFLASGSSDANLKIWDIRKKGC------IQTYKGHSRGISTIRFTPDGRWVVSGGLDNVV 166
Query: 173 CVWDLEAGKREMEFDAHAGDVVSISLSP 200
VWDL AGK EF H G + S+ P
Sbjct: 167 KVWDLTAGKLLHEFKFHEGPIRSLDFHP 194
Score = 45.2 bits (102), Expect = 3e-05
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 7/132 (5%)
Query: 71 SRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDV 130
SR +TG D K+ +W + + ++ V SVAF + V G + ++DV
Sbjct: 28 SRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDV 87
Query: 131 NNRDATGAAKMVRELAGYEGFLSSCRFLDDTHIL-TGSGDMKICVWDLEAGKREMEFDAH 189
AKMVR G+ S+ F L +GS D + +WD+ + H
Sbjct: 88 EE------AKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGH 141
Query: 190 AGDVVSISLSPD 201
+ + +I +PD
Sbjct: 142 SRGISTIRFTPD 153
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 68.1 bits (159), Expect = 4e-12
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
LKGH ++V+ V R +T + DG + +WD + V + S+ ++S+ + S
Sbjct: 935 LKGHDSQVSCVKMLSGER-VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 115 FVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICV 174
+A G D + ++D+ + K + +L G+ ++ S R ++DT ++TGS D V
Sbjct: 994 ILAAAGRDTVANIWDIRS------GKQMHKLKGHTKWIRSIRMVEDT-LITGSDDWTARV 1046
Query: 175 WDLEAGKREMEFDAHAGDVVSISLSP 200
W + G + HAG V S+ SP
Sbjct: 1047 WSVSRGSCDAVLACHAGPVQSVEYSP 1072
Score = 45.2 bits (102), Expect = 3e-05
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
+ TLKGH V ++ S D V+GS D +I+WD + ++ + + V V
Sbjct: 892 RATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKML- 948
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSG-DM 170
SG V D ++DV V + + S + D T IL +G D
Sbjct: 949 SGERVLTAAHDGTVKMWDVRTD------MCVATVGRCSSAILSLEYDDSTGILAAAGRDT 1002
Query: 171 KICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+WD+ +GK+ + H + SI + D
Sbjct: 1003 VANIWDIRSGKQMHKLKGHTKWIRSIRMVED 1033
Score = 37.1 bits (82), Expect = 0.009
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 58 HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSG--NKVQIIPLRSAWVMSVAFAPSGNF 115
H V SV YS + +TGS DG L W+ G V+ I L S+ ++S+ N+
Sbjct: 1061 HAGPVQSVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSSSILSI--NAGENW 1118
Query: 116 VACGGMDNMCTVY 128
+ G DN +++
Sbjct: 1119 LGIGAADNSMSLF 1131
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
LKGH + S+ D+ +TGS D +W G+ ++ + V SV ++P
Sbjct: 1018 LKGHTKWIRSIRMVEDT--LITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDK 1075
Query: 115 FVACGGMDNMCTVYD 129
+ G D + ++
Sbjct: 1076 GIITGSADGLLRFWE 1090
Score = 31.5 bits (68), Expect = 0.43
Identities = 24/109 (22%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 70 DSRHCVTGSLDGKLIIWD-TWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVY 128
D+ ++GS D + IWD + G++++ + + G V+ G D++ +
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGKIVS--GSDDLSVI- 922
Query: 129 DVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVWDL 177
V ++ T +++ EL G++ +S + L +LT + D + +WD+
Sbjct: 923 -VWDKQTT---QLLEELKGHDSQVSCVKMLSGERVLTAAHDGTVKMWDV 967
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 115 FVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICV 174
F G D + ++D + R +++ L G+ G + + D I++GS D+ + V
Sbjct: 869 FFISGSTDCLVKIWDPSLR----GSELRATLKGHTGTVRAISS-DRGKIVSGSDDLSVIV 923
Query: 175 WDLEAGKREMEFDAHAGDVVSISL 198
WD + + E H V + +
Sbjct: 924 WDKQTTQLLEELKGHDSQVSCVKM 947
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 67.7 bits (158), Expect = 5e-12
Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 27 EKLADAKLAEKCSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
E L A A L D+ + + V +TL GH + SV + +GSLD L IW
Sbjct: 71 EVLVAAGAASGTIKLWDLEEAKIV--RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 87 DTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELA 146
D + + V + F P G +V GG DN+ V+D+ A K++ E
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT------AGKLLTEFK 182
Query: 147 GYEGFLSSCRFLDDTHIL-TGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDYHT 204
+EG + S F +L TGS D + WDLE + V +S +PD T
Sbjct: 183 SHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKT 241
Score = 66.5 bits (155), Expect = 1e-11
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
+L GH + ++SV + G+ G + +WD V+ + + +SV F P G
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH-ILTGSGDMKI 172
F A G +D ++D+ + + G+ ++ RF D +++G D +
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGC------IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIV 167
Query: 173 CVWDLEAGKREMEFDAHAGDVVSISLSP 200
VWDL AGK EF +H G + S+ P
Sbjct: 168 KVWDLTAGKLLTEFKSHEGQIQSLDFHP 195
Score = 41.5 bits (93), Expect = 4e-04
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 7/132 (5%)
Query: 71 SRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDV 130
SR VTG D K+ +W N + + S+ + SV F S VA G ++D+
Sbjct: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDL 88
Query: 131 NNRDATGAAKMVRELAGYEGFLSSCRFLD-DTHILTGSGDMKICVWDLEAGKREMEFDAH 189
AK+VR L G+ S F +GS D + +WD+ + H
Sbjct: 89 EE------AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
Query: 190 AGDVVSISLSPD 201
V + +PD
Sbjct: 143 TRGVNVLRFTPD 154
Score = 30.3 bits (65), Expect = 0.99
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNF 115
K H ++ S+ + TGS D + WD + + +A V ++F P G
Sbjct: 182 KSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKT 241
Query: 116 VACGGMDNM 124
V CG +++
Sbjct: 242 VLCGLQESL 250
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 67.7 bits (158), Expect = 5e-12
Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 27 EKLADAKLAEKCSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
E L A A L D+ + + V +TL GH + SV + +GSLD L IW
Sbjct: 71 EVLVAAGAASGTIKLWDLEEAKIV--RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 87 DTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELA 146
D + + V + F P G +V GG DN+ V+D+ A K++ E
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT------AGKLLTEFK 182
Query: 147 GYEGFLSSCRFLDDTHIL-TGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDYHT 204
+EG + S F +L TGS D + WDLE + V +S +PD T
Sbjct: 183 SHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKT 241
Score = 66.5 bits (155), Expect = 1e-11
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
+L GH + ++SV + G+ G + +WD V+ + + +SV F P G
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH-ILTGSGDMKI 172
F A G +D ++D+ + + G+ ++ RF D +++G D +
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGC------IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIV 167
Query: 173 CVWDLEAGKREMEFDAHAGDVVSISLSP 200
VWDL AGK EF +H G + S+ P
Sbjct: 168 KVWDLTAGKLLTEFKSHEGQIQSLDFHP 195
Score = 41.5 bits (93), Expect = 4e-04
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 7/132 (5%)
Query: 71 SRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDV 130
SR VTG D K+ +W N + + S+ + SV F S VA G ++D+
Sbjct: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDL 88
Query: 131 NNRDATGAAKMVRELAGYEGFLSSCRFLD-DTHILTGSGDMKICVWDLEAGKREMEFDAH 189
AK+VR L G+ S F +GS D + +WD+ + H
Sbjct: 89 EE------AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
Query: 190 AGDVVSISLSPD 201
V + +PD
Sbjct: 143 TRGVNVLRFTPD 154
Score = 30.3 bits (65), Expect = 0.99
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNF 115
K H ++ S+ + TGS D + WD + + +A V ++F P G
Sbjct: 182 KSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKT 241
Query: 116 VACGGMDNM 124
V CG +++
Sbjct: 242 VLCGLQESL 250
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 67.3 bits (157), Expect = 7e-12
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
+L GH + ++SV + G+ G + +WD V+ + + +SV F P G
Sbjct: 147 SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 206
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH-ILTGSGDMKI 172
F A G +D ++D+ + + G+ ++ RF D I++G D +
Sbjct: 207 EFFASGSLDTNLKIWDIRKKGC------IHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVV 260
Query: 173 CVWDLEAGKREMEFDAHAGDVVSISLSP 200
VWDL AGK EF +H G + S+ P
Sbjct: 261 KVWDLTAGKLLHEFKSHEGKIQSLDFHP 288
Score = 66.1 bits (154), Expect = 2e-11
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 27 EKLADAKLAEKCSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
E L A A L D+ + + V +TL GH + SV++ +GSLD L IW
Sbjct: 164 EGLVAAGAASGTIKLWDLEEAKVV--RTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIW 221
Query: 87 DTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELA 146
D + + V + F P G ++ GG DN+ V+D+ A K++ E
Sbjct: 222 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLT------AGKLLHEFK 275
Query: 147 GYEGFLSSCRFLDDTHIL-TGSGDMKICVWDLE 178
+EG + S F +L TGS D + WDLE
Sbjct: 276 SHEGKIQSLDFHPHEFLLATGSADKTVKFWDLE 308
Score = 43.6 bits (98), Expect = 1e-04
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 7/132 (5%)
Query: 71 SRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDV 130
SR VTG D K+ +W N + + S+ + SV F S VA G ++D+
Sbjct: 122 SRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDL 181
Query: 131 NNRDATGAAKMVRELAGYEGFLSSCRFLD-DTHILTGSGDMKICVWDLEAGKREMEFDAH 189
AK+VR L G+ S F +GS D + +WD+ + H
Sbjct: 182 EE------AKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 235
Query: 190 AGDVVSISLSPD 201
V + +PD
Sbjct: 236 TRGVNVLRFTPD 247
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/85 (25%), Positives = 37/85 (43%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
T KGH VN + ++ D R V+G D + +WD +G + + S+ F P
Sbjct: 231 TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE 290
Query: 114 NFVACGGMDNMCTVYDVNNRDATGA 138
+A G D +D+ + G+
Sbjct: 291 FLLATGSADKTVKFWDLETFELIGS 315
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 66.9 bits (156), Expect = 9e-12
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 26 QEKLADAKLAEKCSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLII 85
+E L A + L D+ + + V + GH + ++V + +GS D L +
Sbjct: 18 EEVLVLAGASSGVIKLWDLEESKMV--RAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRV 75
Query: 86 WDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVREL 145
WDT +Q + + ++ F+P G +V GG+DN+ V+D+ A K++ E
Sbjct: 76 WDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLT------AGKLLHEF 129
Query: 146 AGYEGFLSSCRFLDDTHIL-TGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDYHT 204
+EG + S F +L TGS D + WDLE + A V +I+ PD T
Sbjct: 130 KCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQT 189
Score = 64.1 bits (149), Expect = 7e-11
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
+L GH + V+SV ++ + + G+ G + +WD V+ + +V F P G
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH-ILTGSGDMKI 172
F+A G D V+D + ++ G+ +S+ F D +++G D +
Sbjct: 62 EFLASGSSDTNLRVWDTRKKGC------IQTYKGHTRGISTIEFSPDGRWVVSGGLDNVV 115
Query: 173 CVWDLEAGKREMEFDAHAGDVVSISLSP 200
VWDL AGK EF H G + S+ P
Sbjct: 116 KVWDLTAGKLLHEFKCHEGPIRSLDFHP 143
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNF 115
K H + S+ + TGS D + WD + + + V ++AF P G
Sbjct: 130 KCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQT 189
Query: 116 VACGGMDNMCTVY 128
+ C G+D+ VY
Sbjct: 190 LFC-GLDDGLKVY 201
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 62.1 bits (144), Expect = 3e-10
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
LKGH N + +H++ D V+ S D + WD +G +++ + S++V S G
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP 151
Query: 115 -FVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH-ILTGSGDMKI 172
+ G D ++D+ R GA + + Y+ +++ F D I TG D +
Sbjct: 152 PLIISGSDDGTAKLWDMRQR---GAIQTFPDK--YQ--ITAVSFSDAADKIFTGGVDNDV 204
Query: 173 CVWDLEAGKREMEFDAHAGDVVSISLSPD 201
VWDL G+ M + H + +SLSPD
Sbjct: 205 KVWDLRKGEATMTLEGHQDTITGMSLSPD 233
Score = 54.0 bits (124), Expect = 7e-08
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 3/136 (2%)
Query: 61 KVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGG 120
++ +V +S + TG +D + +WD G + + ++ +P G+++ G
Sbjct: 182 QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNG 241
Query: 121 MDNMCTVYDVNNRDATGAAKMVRE--LAGYEGFLSSCRFL-DDTHILTGSGDMKICVWDL 177
MDN V+D+ + E +E L C + D T + GS D + +WD
Sbjct: 242 MDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
Query: 178 EAGKREMEFDAHAGDV 193
+ + + H G V
Sbjct: 302 TSRRTIYKLPGHTGSV 317
Score = 40.7 bits (91), Expect = 7e-04
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD----TWSGNKVQIIPLR----SAWVM 105
TL+GH + + + S D + +T +D KL +WD V+I ++
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 106 SVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF 157
+++P G V G D M ++D +R + + +L G+ G ++ C F
Sbjct: 277 KCSWSPDGTKVTAGSSDRMVHIWDTTSR------RTIYKLPGHTGSVNECVF 322
Score = 33.5 bits (73), Expect = 0.11
Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK-VQIIPLRSAWVMSVAFAPSG 113
L GH + V ++ ++ +GS D ++ +W K ++ ++ + + G
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSC--RFLDDTHILTGSGDMK 171
+ + D +DV TG K ++++A + F++SC I++GS D
Sbjct: 109 SQIVSASPDKTVRAWDVE----TG--KQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGT 162
Query: 172 ICVWDL-EAGKREMEFDAHAGDVVSISLSPD 201
+WD+ + G + D + VS S + D
Sbjct: 163 AKLWDMRQRGAIQTFPDKYQITAVSFSDAAD 193
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 67 YSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFV-ACGGMDNM 124
+S D GS D + IWDT S + +P + V F P+ + +C N+
Sbjct: 280 WSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNI 338
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 62.1 bits (144), Expect = 3e-10
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 50 VTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
V ++ + GH + V V S D + ++GS DG+L +WD +G + + V+SVAF
Sbjct: 54 VAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAF 113
Query: 110 APSGNFVACGGMDNMCTVYDVNNRDATGAAK-MVRELAGYEGFLSSCRFLDDT---HILT 165
+ + D ++ + G K + E G++ ++S RF +T I++
Sbjct: 114 STDNRQIVSASRDRTIKLW-----NTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVS 168
Query: 166 GSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
S D + VW+L+ K H+G + ++++SPD
Sbjct: 169 ASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPD 204
Score = 54.8 bits (126), Expect = 4e-08
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL--RSAWVMSVAFAPSGN 114
GH V SV +S D+R V+ S D + +W+T K I WV V F+P+
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTL 162
Query: 115 F--VACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSG-DMK 171
+ D V+++ N K+ LAG+ G+L++ D + G D
Sbjct: 163 VPTIVSASWDKTVKVWNLQN------CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGV 216
Query: 172 ICVWDLEAGKREMEFDAHAGDVV-SISLSPD 201
I +WDL GK+ + AG ++ S+ SP+
Sbjct: 217 ILLWDLAEGKK--LYSLEAGSIIHSLCFSPN 245
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
+ TL GH +N+V S D C +G DG +++WD G K+ + S + S+ F+P
Sbjct: 186 RNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSP 244
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKM 141
+ + C +N ++D+ ++ K+
Sbjct: 245 N-RYWLCAATENSIRIWDLESKSVVEDLKV 273
Score = 37.5 bits (83), Expect = 0.007
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 57 GHLNKVNSVHYSGDSR--HCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
GH V+ V +S ++ V+ S D + +W+ + + S ++ +VA +P G+
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206
Query: 115 FVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICV 174
A GG D + ++D+ A G K+ AG + S F + + L + + I +
Sbjct: 207 LCASGGKDGVILLWDL----AEG-KKLYSLEAG--SIIHSLCFSPNRYWLCAATENSIRI 259
Query: 175 WDLEA 179
WDLE+
Sbjct: 260 WDLES 264
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 61.3 bits (142), Expect = 5e-10
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 50 VTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
V ++ L GH + V V S D + ++GS DG+L +WD +G + + V+SVAF
Sbjct: 54 VAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAF 113
Query: 110 APSGNFVACGGMDNMCTVYDVNNRDATGAAK-MVRELAGYEGFLSSCRFLDDT---HILT 165
+ + D ++ + G K + E G++ ++S RF +T I++
Sbjct: 114 STDNRQIVSASRDRTIKLW-----NTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVS 168
Query: 166 GSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
S D + VW+L+ K H+G + ++++SPD
Sbjct: 169 ASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPD 204
Score = 53.6 bits (123), Expect = 9e-08
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 51 TKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL--RSAWVMSVA 108
T + GH V SV +S D+R V+ S D + +W+T K I WV V
Sbjct: 97 TTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVR 156
Query: 109 FAPSGNF--VACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTG 166
F+P+ + D V+++ N K+ L G+ G+L++ D +
Sbjct: 157 FSPNTLVPTIVSASWDKTVKVWNLQN------CKLRNSLVGHSGYLNTVAVSPDGSLCAS 210
Query: 167 SG-DMKICVWDLEAGKREMEFDAHAGDVV-SISLSPD 201
G D I +WDL GK+ + AG ++ S+ SP+
Sbjct: 211 GGKDGVILLWDLAEGKK--LYSLEAGSIIHSLCFSPN 245
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
+ +L GH +N+V S D C +G DG +++WD G K+ + S + S+ F+P
Sbjct: 186 RNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSP 244
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKM 141
+ + C +N ++D+ ++ K+
Sbjct: 245 N-RYWLCAATENSIRIWDLESKSVVEDLKV 273
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 60.9 bits (141), Expect = 6e-10
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQ-IIPLRSAWVMSVAFAP 111
K L H + V +V ++ D V+ S DG IWD+ +G+ V+ +I + V V F+P
Sbjct: 149 KVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP 208
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEG----FLSSCRFLDDTHILTGS 167
+G F+ G +DN ++++++ AK ++ G+ S+ + I++GS
Sbjct: 209 NGKFILVGTLDNTLRLWNISS------AKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGS 262
Query: 168 GDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
D + +W+L + K + + H V++++ P
Sbjct: 263 EDNCVHMWELNSKKLLQKLEGHTETVMNVACHP 295
Score = 60.1 bits (139), Expect = 1e-09
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
KTL GH N V+++ S V+GS D + IWD +G ++++P S V +V F
Sbjct: 107 KTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRD 166
Query: 113 GNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEG-FLSSCRFL-DDTHILTGSGDM 170
G+ + D +C ++D +G V+ L E +S RF + IL G+ D
Sbjct: 167 GSLIVSSSYDGLCRIWD------SGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDN 220
Query: 171 KICVWDLEAGKREMEFDAHAGDVVSIS 197
+ +W++ + K + H IS
Sbjct: 221 TLRLWNISSAKFLKTYTGHVNAQYCIS 247
Score = 54.0 bits (124), Expect = 7e-08
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFV 116
GH N ++ V +S D+R V+ S D L +WD +G+ ++ + + + V F P N +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 117 ACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKIC-VW 175
G D ++DV TG K ++ L + +++ F D ++ S +C +W
Sbjct: 129 VSGSFDETVRIWDV----TTG--KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Query: 176 DLEAG 180
D G
Sbjct: 183 DSGTG 187
Score = 49.2 bits (112), Expect = 2e-06
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 49 FVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK-----VQIIPLRSAW 103
+V +TL H V+SV +S D R + S D + + + N VQ
Sbjct: 14 YVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENG 73
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH- 162
+ VAF+ F+ D ++DV TG+ +++ L G+ + F ++
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVE----TGS--LIKTLIGHTNYAFCVNFNPQSNM 127
Query: 163 ILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
I++GS D + +WD+ GK AH+ V ++ + D
Sbjct: 128 IVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRD 166
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 53 KTLKGHLNK---VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
KT GH+N ++S + + V+GS D + +W+ S +Q + + VM+VA
Sbjct: 234 KTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVAC 293
Query: 110 APSGNFVACGGMDNMCTVY 128
P+ N +A G +D ++
Sbjct: 294 HPTENLIASGSLDKTVRIW 312
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 60.9 bits (141), Expect = 6e-10
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD--TWSGNKVQIIPLRSAWVMSVAFAP 111
T H N V ++H+ D+ ++ SLDG + WD + K P +V S+ P
Sbjct: 386 TFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFV-SLTADP 444
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSG-DM 170
SG+ V G +D+ ++ + + TG K + L+G+E + F T +L S D
Sbjct: 445 SGDVVCAGTLDSF-EIFVWSKK--TGQIKDI--LSGHEAPVHGLMFSPLTQLLASSSWDY 499
Query: 171 KICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ +WD+ A K +E H DV++++ PD
Sbjct: 500 TVRLWDVFASKGTVETFRHNHDVLTVAFRPD 530
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNF 115
+GH VN V YS DS+ TG+ D K+ +W+ SG + V ++ F +
Sbjct: 346 QGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHS 405
Query: 116 VACGGMDNMCTVYD 129
+ +D +D
Sbjct: 406 LLSASLDGTVRAWD 419
Score = 34.7 bits (76), Expect = 0.046
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 15/141 (10%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
K L GH V+ + +S ++ + S D + +WD ++ + V++VAF P
Sbjct: 470 KDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRP 529
Query: 112 SGNFVACGGMDNMCTVYDV----------NNRDATGAAKMV--RELAGYEG---FLSSCR 156
G +A +D +D RD G M R A F + C
Sbjct: 530 DGKQLASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRVMTDRRSAANSSSGKCFTTLCY 589
Query: 157 FLDDTHILTGSGDMKICVWDL 177
D +IL IC++D+
Sbjct: 590 SADGGYILAAGTSRYICMYDI 610
Score = 30.3 bits (65), Expect = 0.99
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 81 GKLIIWDTWSGNKVQIIPLRSAW--VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGA 138
G+L++WD W + I+ + + V V ++P +A G DN V++V +G
Sbjct: 329 GQLLVWD-WR-TETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNV----MSGT 382
Query: 139 AKMVRELAGYEGFLSSCRFLDDTH-ILTGSGDMKICVWDLEAGK 181
+ + +++ F+ D H +L+ S D + WD + K
Sbjct: 383 CFIT--FTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYK 424
Score = 30.3 bits (65), Expect = 0.99
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 159 DDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDYHT 204
D + TG+ D K+ VW++ +G + F H V ++ D H+
Sbjct: 360 DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHS 405
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 49 FVTKKTLKG--HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSG 91
F +K T++ H + V +V + D + + +LDG++ WDT G
Sbjct: 507 FASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEG 551
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 60.9 bits (141), Expect = 6e-10
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD--TWSGNKVQIIPLRSAWVMSVAFAP 111
T H N V ++H+ D+ ++ SLDG + WD + K P +V S+ P
Sbjct: 426 TFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFV-SLTADP 484
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSG-DM 170
SG+ V G +D+ ++ + + TG K + L+G+E + F T +L S D
Sbjct: 485 SGDVVCAGTLDSF-EIFVWSKK--TGQIKDI--LSGHEAPVHGLMFSPLTQLLASSSWDY 539
Query: 171 KICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ +WD+ A K +E H DV++++ PD
Sbjct: 540 TVRLWDVFASKGTVETFRHNHDVLTVAFRPD 570
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNF 115
+GH VN V YS DS+ TG+ D K+ +W+ SG + V ++ F +
Sbjct: 386 QGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHS 445
Query: 116 VACGGMDNMCTVYD 129
+ +D +D
Sbjct: 446 LLSASLDGTVRAWD 459
Score = 34.7 bits (76), Expect = 0.046
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 15/141 (10%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
K L GH V+ + +S ++ + S D + +WD ++ + V++VAF P
Sbjct: 510 KDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRP 569
Query: 112 SGNFVACGGMDNMCTVYDV----------NNRDATGAAKMV--RELAGYEG---FLSSCR 156
G +A +D +D RD G M R A F + C
Sbjct: 570 DGKQLASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRVMTDRRSAANSSSGKCFTTLCY 629
Query: 157 FLDDTHILTGSGDMKICVWDL 177
D +IL IC++D+
Sbjct: 630 SADGGYILAAGTSRYICMYDI 650
Score = 30.3 bits (65), Expect = 0.99
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 81 GKLIIWDTWSGNKVQIIPLRSAW--VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGA 138
G+L++WD W + I+ + + V V ++P +A G DN V++V +G
Sbjct: 369 GQLLVWD-WR-TETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNV----MSGT 422
Query: 139 AKMVRELAGYEGFLSSCRFLDDTH-ILTGSGDMKICVWDLEAGK 181
+ + +++ F+ D H +L+ S D + WD + K
Sbjct: 423 CFIT--FTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYK 464
Score = 30.3 bits (65), Expect = 0.99
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 159 DDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDYHT 204
D + TG+ D K+ VW++ +G + F H V ++ D H+
Sbjct: 400 DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHS 445
Score = 29.1 bits (62), Expect = 2.3
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVY-DVNNRDATGAAKMVRELAGYEGFLSSCRF-LDDT 161
V ++ F+P+G F+A G+ + ++ R A + VR A + + S + LD
Sbjct: 96 VGALKFSPNGKFIAV-GIGKLVEIWRSPGFRRAVLPFERVRTFANSDDKVVSLEWSLDSD 154
Query: 162 HILTGSGDMK---ICVWDLEAG-KREMEFDAHAGDVVSISLSPDYHTDKV 207
++L GS D+ CV L+ + F H VV D T+KV
Sbjct: 155 YLLVGSRDLAARLFCVRKLKGVLNKPFLFLGHRDSVVGCFFGVDKMTNKV 204
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 49 FVTKKTLKG--HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSG 91
F +K T++ H + V +V + D + + +LDG++ WDT G
Sbjct: 547 FASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEG 591
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 60.5 bits (140), Expect = 8e-10
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQ-IIPLRSAWVMSVAFAP 111
+ +K H ++SVH++ D V+ S DG IWD G ++ +I +S V F+P
Sbjct: 164 RMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSP 223
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEG----FLSSCRFLDDTHILTGS 167
+G F+ +D+ + + ATG K ++ G+ S+ + +I++GS
Sbjct: 224 NGKFILVATLDSTLKL----SNYATG--KFLKVYTGHTNKVFCITSAFSVTNGKYIVSGS 277
Query: 168 GDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
D + +WDL+A + H V+S+S P
Sbjct: 278 EDNCVYLWDLQARNILQRLEGHTDAVISVSCHP 310
Score = 57.6 bits (133), Expect = 6e-09
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 29 LADAKLAEKCSDLGDVPKIR-FVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD 87
+A+A G+VP + + KTL+GH ++ V +S D + S+D +I+W
Sbjct: 12 VANANSTGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWS 71
Query: 88 TWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAG 147
+ + + S+ + +A++ ++ C D+ CT + DA + ++ L G
Sbjct: 72 ATNYSLIHRYEGHSSGISDLAWSSDSHY-TCSASDD-CT---LRIWDARSPYECLKVLRG 126
Query: 148 YEGFLSSCRFLDDTH-ILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ F+ F ++ I++GS D I +W+++ GK AH+ + S+ + D
Sbjct: 127 HTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRD 181
Score = 50.8 bits (116), Expect = 7e-07
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
K L+GH N V V+++ S V+GS D + IW+ +G V++I S + SV F
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRD 181
Query: 113 GNFVACGGMDNMCTVYD 129
G+ + D C ++D
Sbjct: 182 GSLIVSASHDGSCKIWD 198
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 53 KTLKGHLNKV---NSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
K GH NKV S + ++ V+GS D + +WD + N +Q + + V+SV+
Sbjct: 249 KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSC 308
Query: 110 APSGNFVACGG 120
P N ++ G
Sbjct: 309 HPVQNEISSSG 319
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 59.7 bits (138), Expect = 1e-09
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 4/151 (2%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL--RSAWVMSVAFAP 111
T KGH N V +V +S D +H V+GS G++ W+ G +++ PL W+ +++ P
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKG-ELEGSPLTGHKKWITGISWEP 204
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMK 171
C D D T K + L+G+ ++ ++ D I TGS D
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDIT-LKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCT 263
Query: 172 ICVWDLEAGKREMEFDAHAGDVVSISLSPDY 202
I +W+ GK E H + S++LS +Y
Sbjct: 264 IKMWETTQGKLIRELKGHGHWINSLALSTEY 294
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 48 RFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSV 107
+FVT +GH+ V V +S DSR ++GS D L IW+ + Q +P + V +V
Sbjct: 393 QFVT--VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAV 450
Query: 108 AFAPSGNFVACGGMDNMCTVY 128
++P G V GG D + ++
Sbjct: 451 DWSPDGEKVVSGGKDRVLKLW 471
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 11/155 (7%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
+T+ GH V V +S D + +GS D + +WD ++ + WV++VA++P
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 113 GNFVACGGMDNMCTVY-----DVNNRDATGAAKMVRELAGYEGFLSS-CRFLDDTHILTG 166
G + G + ++ TG K + ++ LSS CR +T
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCR-----RFVTS 217
Query: 167 SGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
S D +WD+ K + H V + D
Sbjct: 218 SKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGD 252
Score = 44.8 bits (101), Expect = 4e-05
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 69 GDS-RHCVTGSLDGKLIIWD-TWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCT 126
GDS V+GS D + +W+ + S + + V V F+P G ++A D
Sbjct: 326 GDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVR 385
Query: 127 VYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHIL-TGSGDMKICVWDLEAGKREME 185
+++ TG + V G+ G + + D+ +L +GS D + +W++ K + +
Sbjct: 386 LWN----GITG--QFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQD 439
Query: 186 FDAHAGDVVSISLSPD 201
HA +V ++ SPD
Sbjct: 440 LPGHADEVFAVDWSPD 455
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/132 (20%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 45 PKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWV 104
P + KK L GH VN V++S D + + S D + +W+ +G V + V
Sbjct: 346 PSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPV 405
Query: 105 MSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTHI 163
V+++ + G D+ ++++ + K+ ++L G+ + + + D +
Sbjct: 406 YQVSWSADSRLLLSGSKDSTLKIWEIRTK------KLKQDLPGHADEVFAVDWSPDGEKV 459
Query: 164 LTGSGDMKICVW 175
++G D + +W
Sbjct: 460 VSGGKDRVLKLW 471
Score = 35.1 bits (77), Expect = 0.035
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 65 VHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNM 124
VH S R VT S DG IWD + + + V V + G + G D
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQD-- 261
Query: 125 CTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGD 169
CT+ T K++REL G+ +++S + + TG+ D
Sbjct: 262 CTI----KMWETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFD 302
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 59.7 bits (138), Expect = 1e-09
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW-DTWSGNKVQIIPL--RSAWVMSVAFA 110
TL GH KV SV + GDS +T S D + IW + GN L SA V +V
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVH 318
Query: 111 PSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHIL-TGSGD 169
P+ + +D YD+++ + Y ++ F D IL TG+
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDY----TAAAFHPDGLILGTGTSQ 374
Query: 170 MKICVWDLEAGKREMEFDAHAGDVVSISLS 199
+ +WD+++ +FD H G+V +IS S
Sbjct: 375 SVVKIWDVKSQANVAKFDGHTGEVTAISFS 404
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 59.7 bits (138), Expect = 1e-09
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW-DTWSGNKVQIIPL--RSAWVMSVAFA 110
TL GH KV SV + GDS +T S D + IW + GN L SA V +V
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVH 318
Query: 111 PSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHIL-TGSGD 169
P+ + +D YD+++ + Y ++ F D IL TG+
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDY----TAAAFHPDGLILGTGTSQ 374
Query: 170 MKICVWDLEAGKREMEFDAHAGDVVSISLS 199
+ +WD+++ +FD H G+V +IS S
Sbjct: 375 SVVKIWDVKSQANVAKFDGHTGEVTAISFS 404
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Query: 63 NSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMD 122
N++ S D +G +DG L +WD +G + + S+ V SV+ + +GN + G D
Sbjct: 361 NAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRD 420
Query: 123 NMCTVYDVNNRDATGAAKMV-RELAGYEGFLSSCRFLDDTHILTGSGDMKICVWDLEAG 180
N+ V+D + G + LA + SC DD ++ GS D + VW L G
Sbjct: 421 NVHNVFDTRTLEICGTLRASGNRLA--SNWSRSCISPDDDYVAAGSADGSVHVWSLSKG 477
Score = 45.2 bits (102), Expect = 3e-05
Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 7/148 (4%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP- 111
K+L G L + + + D++ + + L +WD SG + + V +V +
Sbjct: 267 KSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKF 326
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMK 171
S V D ++D++ T C +D + +G D
Sbjct: 327 SSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAI------CLSIDGLTVFSGHMDGN 380
Query: 172 ICVWDLEAGKREMEFDAHAGDVVSISLS 199
+ +WD++ GK E H+ V S+SLS
Sbjct: 381 LRLWDIQTGKLLSEVAGHSSAVTSVSLS 408
Score = 31.5 bits (68), Expect = 0.43
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
+ H S+ + +S TG D + +WDT SG ++ + ++ +A
Sbjct: 227 IHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNK 286
Query: 115 FVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF--LDDTHILTGSGDMKI 172
V N V+DV+ + ++ L G+ + + H+++ + D I
Sbjct: 287 SVIAATSSNNLFVWDVS------SGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTI 340
Query: 173 CVWDLEAG 180
+WDL G
Sbjct: 341 KLWDLHKG 348
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 68 SGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDN-MCT 126
S D + GS DG + +W GN V I+ +++ ++ +++ G +A + +CT
Sbjct: 454 SPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCT 513
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNF 115
+GH V + + D + LD +WD +G + + V SV F+P+G
Sbjct: 378 EGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYH 437
Query: 116 VACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF--LDDTHILTGSGDMKIC 173
+A GG DN C ++D+ R K + + + +S ++ + + T S DMK+
Sbjct: 438 LASGGEDNQCRIWDLRMR------KSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVN 491
Query: 174 VWDLEAGKREMEFDAHAGDVVSISLSPD 201
+W H V S+ ++ D
Sbjct: 492 IWSGRDFSLVKSLAGHESKVASLDITAD 519
Score = 53.2 bits (122), Expect = 1e-07
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
+T +GHL+++ V + ++ T S D +WD +G ++ + S V +AF
Sbjct: 333 QTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQD 392
Query: 113 GNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTHILTGSGDMK 171
G A G+D++ V+D+ TG + +V G+ + S F + H+ +G D +
Sbjct: 393 GALAASCGLDSLARVWDLR----TGRSILV--FQGHIKPVFSVNFSPNGYHLASGGEDNQ 446
Query: 172 ICVWDLEAGKREMEFDAHAGDVVSISLSP 200
+WDL K AHA V + P
Sbjct: 447 CRIWDLRMRKSLYIIPAHANLVSQVKYEP 475
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 49 FVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGN 92
F K+L GH +KV S+ + DS T S D + +W T SGN
Sbjct: 498 FSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW-TSSGN 540
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 56.8 bits (131), Expect = 1e-08
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 50 VTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
V ++ L GH + V V S D + ++GS DG+L +WD +G + + V+SVAF
Sbjct: 54 VAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAF 113
Query: 110 APSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELA--GYEGFLSSCRFLDDT---HIL 164
+ + D ++ + G K G+ ++S RF +T I+
Sbjct: 114 SLDNRQIVSASRDRTIKLW-----NTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 168
Query: 165 TGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ S D + VW+L K H G V ++++SPD
Sbjct: 169 SASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPD 205
Score = 50.4 bits (115), Expect = 9e-07
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 12/147 (8%)
Query: 50 VTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSA---WVMS 106
V+ + GH V SV +S D+R V+ S D + +W+T K I WV
Sbjct: 96 VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSC 155
Query: 107 VAFAPSG--NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHIL 164
V F+P+ + D V++++N K+ LAG+ G++S+ D +
Sbjct: 156 VRFSPNTLQPTIVSASWDKTVKVWNLSN------CKLRSTLAGHTGYVSTVAVSPDGSLC 209
Query: 165 TGSG-DMKICVWDLEAGKREMEFDAHA 190
G D + +WDL GK+ +A++
Sbjct: 210 ASGGKDGVVLLWDLAEGKKLYSLEANS 236
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
+ TL GH V++V S D C +G DG +++WD G K+ + S + ++ F+P
Sbjct: 187 RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV-IHALCFSP 245
Query: 112 SGNFVACGGMDNMCTVYDVNNR 133
+ + C ++ ++D+ ++
Sbjct: 246 N-RYWLCAATEHGIKIWDLESK 266
Score = 37.1 bits (82), Expect = 0.009
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 56 KGHLNKVNSVHYSGDSRH--CVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
+GH + V+ V +S ++ V+ S D + +W+ + + + +V +VA +P G
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKIC 173
+ A GG D + ++D+ A G K + L + C F + + L + + I
Sbjct: 207 SLCASGGKDGVVLLWDL----AEG--KKLYSLEANSVIHALC-FSPNRYWLCAATEHGIK 259
Query: 174 VWDLEA 179
+WDLE+
Sbjct: 260 IWDLES 265
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 55.6 bits (128), Expect = 2e-08
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 7/152 (4%)
Query: 50 VTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
V K TL GH+ +V + S + + D ++ WD ++ + V +A
Sbjct: 209 VLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLAL 268
Query: 110 APSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSC-RFLDDTHILTGSG 168
P+ + + GG D++C V+D+ + + L+G++ + S D ++TGS
Sbjct: 269 HPTLDVLLTGGRDSVCRVWDIRTK------MQIFALSGHDNTVCSVFTRPTDPQVVTGSH 322
Query: 169 DMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
D I WDL GK H V +++L P
Sbjct: 323 DTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHP 354
Score = 50.0 bits (114), Expect = 1e-06
Identities = 52/206 (25%), Positives = 80/206 (38%), Gaps = 15/206 (7%)
Query: 1 MPKEDPETTALKKELTDLISKVKADQEKLADAKLAEKCSDLGDVPKIRFVTK--KTLKGH 58
+PK T + K T + + V + Q L+ A L E+ P+ K + ++GH
Sbjct: 116 LPKGLNYTGSSGKSTTIIPANVSSYQRNLSTAALMERIPSRWPRPEWHAPWKNYRVIQGH 175
Query: 59 LNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVAC 118
L V SV + + TGS D + IWD +G + V +A + ++
Sbjct: 176 LGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFS 235
Query: 119 GGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSS--CRFLDDT--HILTGSGDMKICV 174
G D +D+ K++R Y G LS C L T +LTG D V
Sbjct: 236 AGDDKQVKCWDLEQN------KVIR---SYHGHLSGVYCLALHPTLDVLLTGGRDSVCRV 286
Query: 175 WDLEAGKREMEFDAHAGDVVSISLSP 200
WD+ + H V S+ P
Sbjct: 287 WDIRTKMQIFALSGHDNTVCSVFTRP 312
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/69 (30%), Positives = 26/69 (37%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
L GH N V SV VTGS D + WD G + + V ++ P N
Sbjct: 298 LSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKEN 357
Query: 115 FVACGGMDN 123
A DN
Sbjct: 358 AFASASADN 366
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 53.2 bits (122), Expect = 1e-07
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
+ + GHL+ V+ + + + TGS D + +WD +G V+I + V+S+A +P
Sbjct: 496 RIMAGHLSDVD---WHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPD 552
Query: 113 GNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHIL-TGSGDMK 171
G ++A G D ++D++ A+ + L G+ + S + + +L +GS D
Sbjct: 553 GRYMASGDEDGTIMMWDLS------TARCITPLMGHNSCVWSLSYSGEGSLLASGSADCT 606
Query: 172 ICVWDLEAGKR 182
+ +WD+ + +
Sbjct: 607 VKLWDVTSSTK 617
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
L GH V S +S ++ S D + +W T + + V F+P G+
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 115 FVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD-THILTGSGDMKIC 173
+ A D ++ ++ + +R +AG+ LS + + +I TGS D +
Sbjct: 474 YFASCSHDRTARIWSMDR------IQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVR 524
Query: 174 VWDLEAGKREMEFDAHAGDVVSISLSPD 201
+WD++ G+ F H V+S+++SPD
Sbjct: 525 LWDVQTGECVRIFIGHRSMVLSLAMSPD 552
Score = 31.5 bits (68), Expect = 0.43
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 43 DVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKV 94
D+ R +T L GH + V S+ YSG+ +GS D + +WD S K+
Sbjct: 569 DLSTARCITP--LMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL 618
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGN-KVQIIPLRSAWVMSVAFAPSG 113
L+ H ++ + YS D + L+ + ++WD S K++ + SA + +A++P+
Sbjct: 487 LERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNS 546
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKIC 173
VA G +D VY+V D +++M + + G + F DD+H+++ D I
Sbjct: 547 TMVATGSLDTCVIVYEV---DKPASSRMTIK-GAHLGGVYGLGFADDSHVVSSGEDACIR 602
Query: 174 VW 175
VW
Sbjct: 603 VW 604
Score = 39.5 bits (88), Expect = 0.002
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 49 FVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSA------ 102
F K + + H N VN V ++ D +T S D K II+D G +I+ S+
Sbjct: 177 FKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYD---GKTCEILGELSSDDGHKG 233
Query: 103 WVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEG----FLSSCRFL 158
+ +V+++P G V D ++D+++ + +G+ G G L C +
Sbjct: 234 SIYAVSWSPDGKQVLTVSADKSAKIWDISD-NGSGSLNTTLNCPGSSGGVDDMLVGCLWQ 292
Query: 159 DDTHILTGSGDMKICVWDL-EAGKREMEFDAHAGDVVSISL 198
+D HI+T S I ++ + K +F H +V S+++
Sbjct: 293 ND-HIVTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLAV 332
Score = 33.9 bits (74), Expect = 0.081
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 20/163 (12%)
Query: 50 VTKKTLKGHLNKVNSVHYSGDSRHCV-TGSLDGKLII----WDTWSGNKVQIIPLRSAWV 104
V K K +++ + +S D V +G GK ++ WD SG+ V S V
Sbjct: 90 VLKNEFKVLAGRIDDLQWSADGMRIVASGDGKGKSLVRAFMWD--SGSNVGEFDGHSRRV 147
Query: 105 MSVAFAPSGNF--VACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD-T 161
+S A P+ F V CG D + Y+ K + F++ RF D +
Sbjct: 148 LSCAIKPTRPFRIVTCGE-DFLVNFYE------GPPFKFKLSSREHSNFVNCVRFAPDGS 200
Query: 162 HILTGSGDMKICVWDLEAGKREMEF---DAHAGDVVSISLSPD 201
+T S D K ++D + + E D H G + ++S SPD
Sbjct: 201 KFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPD 243
Score = 30.7 bits (66), Expect = 0.75
Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHI 163
V ++A P G GG D +Y +N T A + R + G +S R+ D +
Sbjct: 450 VTALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLER----HRGAISVIRYSPDLSM 505
Query: 164 LTGSG-DMKICVWDLEAGKREME-FDAHAGDVVSISLSPD 201
+ + + VWD + + +++ H+ + ++ SP+
Sbjct: 506 FASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPN 545
Score = 29.9 bits (64), Expect = 1.3
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 14/133 (10%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD-----TWSGNKVQIIPLRSAWV--MSVAF 109
GH + +V +S D + +T S D IWD + S N P S V M V
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGC 289
Query: 110 APSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDT--HILTGS 167
+ + + +++ ++ D K + +G+ +SS L +IL+GS
Sbjct: 290 LWQNDHIVTVSLGGTISIFSASDLD-----KSPFQFSGHMKNVSSLAVLKGNADYILSGS 344
Query: 168 GDMKICVWDLEAG 180
D IC W L G
Sbjct: 345 YDGLICKWMLGRG 357
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 102 AWVMSVA-FAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD 160
A+ +VA ++P+G ++A G + ++ N + E G + ++ D
Sbjct: 56 AYPATVARYSPNGEWIASGDVSGTVRIWGAYNDHV-----LKNEFKVLAGRIDDLQWSAD 110
Query: 161 THILTGSGD------MKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
+ SGD ++ +WD +G EFD H+ V+S ++ P
Sbjct: 111 GMRIVASGDGKGKSLVRAFMWD--SGSNVGEFDGHSRRVLSCAIKP 154
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW--DTWSGNKVQIIPLRSAWVMSVAFA 110
K + H ++N + +S +S TGSLD +I++ D + +++ I V + FA
Sbjct: 528 KNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFA 587
Query: 111 PSGNFVACG 119
+ V+ G
Sbjct: 588 DDSHVVSSG 596
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 7/131 (5%)
Query: 47 IRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMS 106
+++ ++ H + V + +S DS +GS DGK+ IW +G ++ S V S
Sbjct: 251 LQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTS 310
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD-THILT 165
++F+ G+ + D ++ + + K+++E G+ +++ F D + I+T
Sbjct: 311 LSFSRDGSQLLSTSFDQTARIHGLK------SGKLLKEFRGHTSYVNHAIFTSDGSRIIT 364
Query: 166 GSGDMKICVWD 176
S D + VWD
Sbjct: 365 ASSDCTVKVWD 375
Score = 41.5 bits (93), Expect = 4e-04
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 109 FAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSS-----C-RFLDDTH 162
F+P G F+A +D V+D +G K + E F+ C F D+
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDY----ISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSE 276
Query: 163 IL-TGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+L +GS D KI +W + G FDAH+ V S+S S D
Sbjct: 277 MLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRD 316
Score = 33.1 bits (72), Expect = 0.14
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 16/154 (10%)
Query: 50 VTKKTLK-GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIP--------LR 100
V T+K G + +S D + + S+DG + +WD SG + + +
Sbjct: 203 VLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMH 262
Query: 101 SAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF-LD 159
V+ + F+ +A G D ++ R TG +R + ++S F D
Sbjct: 263 DDPVLCIDFSRDSEMLASGSQDGKIKIW----RIRTGVC--IRRFDAHSQGVTSLSFSRD 316
Query: 160 DTHILTGSGDMKICVWDLEAGKREMEFDAHAGDV 193
+ +L+ S D + L++GK EF H V
Sbjct: 317 GSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYV 350
Score = 33.1 bits (72), Expect = 0.14
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQII----PLR--SAWVMS 106
K +GH + VN ++ D +T S D + +WD+ + + +Q PLR A V S
Sbjct: 341 KEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNS 400
Query: 107 VAFAPSG--NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHIL 164
+ P + V C ++ + + + + RE G F+++C I
Sbjct: 401 IHLFPKNTEHIVVCNKTSSI-YIMTLQGQVVKSFSSGNRE-GG--DFVAACVSTKGDWIY 456
Query: 165 TGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
D K+ ++ ++G E H DV+ I+ P
Sbjct: 457 CIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHP 492
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 52.4 bits (120), Expect = 2e-07
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
K T++G + + ++ S D + + ++ +WD + ++ VM +A
Sbjct: 53 KSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHA 112
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH---ILTGSG 168
SG +A G D V+DV+ T G++G +SS F D++ +++GS
Sbjct: 113 SGGLLATAGADRKVLVWDVDGGFCT------HYFRGHKGVVSSILFHPDSNKNILISGSD 166
Query: 169 DMKICVWDLEAGKREME----FDAHAGDVVSISLSPD 201
D + VWDL A E + + H V SI+LS D
Sbjct: 167 DATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSED 203
Score = 44.0 bits (99), Expect = 8e-05
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 17 DLISKVKADQEKLADAKLAEKCSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVT 76
D+ S A + L ++ + + +P + V TLKGH ++ SV +S + +T
Sbjct: 501 DINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVV--TLKGHKRRIFSVEFSTVDQCVMT 558
Query: 77 GSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG-NFVACGGMDNMCTVYDVNNRDA 135
S D + IW G+ ++ ++ V+ +F G FV+CG D + +++VN
Sbjct: 559 ASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGA-DGLLKLWNVN---- 613
Query: 136 TGAAKMVRELAGYEGFLSSCRFLDDTH-ILTGSGDMKICVW-DLEAGKREMEF 186
++ + +E + + T I TG GD I +W D A +E +F
Sbjct: 614 --TSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDKEDDF 664
Score = 37.1 bits (82), Expect = 0.009
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 7/118 (5%)
Query: 85 IWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRE 144
I D+ + I S + ++A +P + G V+D+ K +R
Sbjct: 44 IVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLET------LKCIRS 97
Query: 145 LAGYEG-FLSSCRFLDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
G+EG + + T D K+ VWD++ G F H G V SI PD
Sbjct: 98 WKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPD 155
Score = 34.7 bits (76), Expect = 0.046
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 57 GHLNKVNSVHYSGDS-RHCVTGSLDGKLIIW--DTWSGNKVQIIPLRSAWVMSVAFAPSG 113
GH + +V ++ S V+GS D L +W D S + + I L++ V++ A
Sbjct: 444 GHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVA-AHDKDI 502
Query: 114 NFVACGGMDNM-CTVYDVNNRDATGAAKMVR--ELAGYEGFLSSCRFLD-DTHILTGSGD 169
N VA D++ CT + +V L G++ + S F D ++T SGD
Sbjct: 503 NSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGD 562
Query: 170 MKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ +W + G F+ H V+ S D
Sbjct: 563 KTVKIWAISDGSCLKTFEGHTSSVLRASFITD 594
Score = 31.5 bits (68), Expect = 0.43
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Query: 75 VTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFA-PSGNFVACGGMDNMCTVYDVN-- 131
VTGS D + +W+ S + + + + +++VAFA S +F G D V+ ++
Sbjct: 420 VTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGI 479
Query: 132 NRDATGAAKMVRE--LAGYEGFLSSCRFL-DDTHILTGSGDMKICVWDLEAGKREMEFDA 188
+ D+ + +A ++ ++S +D+ + TGS D +W L +
Sbjct: 480 SEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKG 539
Query: 189 HAGDVVSISLS 199
H + S+ S
Sbjct: 540 HKRRIFSVEFS 550
Score = 28.3 bits (60), Expect = 4.0
Identities = 27/153 (17%), Positives = 57/153 (37%), Gaps = 7/153 (4%)
Query: 47 IRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMS 106
I T+ + H +NSV + + TGS D IW V + + S
Sbjct: 487 INLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFS 546
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTHILT 165
V F+ V D ++ +++ ++ G+ + F+ D T ++
Sbjct: 547 VEFSTVDQCVMTASGDKTVKIWAISD------GSCLKTFEGHTSSVLRASFITDGTQFVS 600
Query: 166 GSGDMKICVWDLEAGKREMEFDAHAGDVVSISL 198
D + +W++ + +D H V ++++
Sbjct: 601 CGADGLLKLWNVNTSECIATYDQHEDKVWALAV 633
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
K+L H V + +S D + ++GS+D IIWD G+ QI+ +V VA+ P
Sbjct: 47 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 106
Query: 113 GNFVACGGMDNMCTVY 128
+VA D C +Y
Sbjct: 107 AKYVASLSSDRTCRIY 122
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 159 DDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
DD ++++GS D +WD+ G DAH V ++ P
Sbjct: 64 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 105
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 76 TGSLDGKLIIW-----DTWSGNKV-QIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYD 129
+G+ G+L IW +T KV + + V+ + ++P ++ G +DN C ++D
Sbjct: 22 SGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWD 81
Query: 130 VN 131
VN
Sbjct: 82 VN 83
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
K+L H V + +S D + ++GS+D IIWD G+ QI+ +V VA+ P
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 165
Query: 113 GNFVACGGMDNMCTVY 128
+VA D C +Y
Sbjct: 166 AKYVASLSSDRTCRIY 181
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTH 162
V ++ F+PSG +A G ++ ++ + + K+ + L+ + + ++ DD +
Sbjct: 67 VNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAY 126
Query: 163 ILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
+++GS D +WD+ G DAH V ++ P
Sbjct: 127 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 164
Score = 37.1 bits (82), Expect = 0.009
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 44 VPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW-----DTWSGNKV-QII 97
VP + + + T G VN++ +S +G+ G+L IW +T KV + +
Sbjct: 51 VPSVSYQSSLTYHGCA--VNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSL 108
Query: 98 PLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVN 131
V+ + ++P ++ G +DN C ++DVN
Sbjct: 109 SFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVN 142
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
K+L H V + +S D + ++GS+D IIWD G+ QI+ +V VA+ P
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 165
Query: 113 GNFVACGGMDNMCTVY 128
+VA D C +Y
Sbjct: 166 AKYVASLSSDRTCRIY 181
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTH 162
V ++ F+PSG +A G ++ ++ + + K+ + L+ + + ++ DD +
Sbjct: 67 VNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAY 126
Query: 163 ILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
+++GS D +WD+ G DAH V ++ P
Sbjct: 127 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDP 164
Score = 37.1 bits (82), Expect = 0.009
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 44 VPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW-----DTWSGNKV-QII 97
VP + + + T G VN++ +S +G+ G+L IW +T KV + +
Sbjct: 51 VPSVSYQSSLTYHGCA--VNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSL 108
Query: 98 PLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVN 131
V+ + ++P ++ G +DN C ++DVN
Sbjct: 109 SFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVN 142
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 52.0 bits (119), Expect = 3e-07
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Query: 50 VTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
V K TL GH+ +V + S + + D ++ WD ++ V +A
Sbjct: 203 VLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLAL 262
Query: 110 APSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGD 169
P+ + V GG D++C V+D+ + + L S D ++TGS D
Sbjct: 263 HPTLDVVLTGGRDSVCRVWDIRTK------MQIFVLPHDSDVFSVLARPTDPQVITGSHD 316
Query: 170 MKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
I WDL GK H V +++L P
Sbjct: 317 STIKFWDLRYGKSMATITNHKKTVRAMALHP 347
Score = 44.4 bits (100), Expect = 6e-05
Identities = 52/207 (25%), Positives = 81/207 (39%), Gaps = 17/207 (8%)
Query: 1 MPKEDPETTALKKELTDLISKVKADQEK-LADAKLAEKCSDLGDVPKIRFVTK--KTLKG 57
+P D T + T ++ + E+ L+ A L E+ P+ K + L+G
Sbjct: 109 LPPRDLNNTGNPGKSTAILPAPGSFSERNLSTAALMERMPSRWPRPEWHAPWKNYRVLQG 168
Query: 58 HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVA 117
HL V SV + + TGS D + IWD +G + V +A + ++
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMF 228
Query: 118 CGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSS--CRFLDDT--HILTGSGDMKIC 173
G D +D+ K++R Y G L C L T +LTG D
Sbjct: 229 SAGDDKQVKCWDLEQN------KVIR---SYHGHLHGVYCLALHPTLDVVLTGGRDSVCR 279
Query: 174 VWDLEAGKREMEFDAHAGDVVSISLSP 200
VWD+ K ++ H DV S+ P
Sbjct: 280 VWDIRT-KMQIFVLPHDSDVFSVLARP 305
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/67 (26%), Positives = 25/67 (37%)
Query: 58 HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVA 117
H + V SV +TGS D + WD G + I V ++A P N
Sbjct: 294 HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFV 353
Query: 118 CGGMDNM 124
DN+
Sbjct: 354 SASADNI 360
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 52.0 bits (119), Expect = 3e-07
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD-TWSGNKVQIIPLR--SAWVMSVAFA 110
TL GH KV S+ + GD+ +T S D + IW + GN L+ SA V +V
Sbjct: 259 TLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVH 318
Query: 111 PSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHIL-TGSGD 169
+ + +D+ YD+++ V + + + ++ F D IL TG+
Sbjct: 319 ATNKYFVSASLDSTWCFYDLSSGLCLA---QVTDASENDVNYTAAAFHPDGLILGTGTAQ 375
Query: 170 MKICVWDLEAGKREMEFDAHAGDVVSISLS 199
+ +WD+++ +F H G++ SIS S
Sbjct: 376 SIVKIWDVKSQANVAKFGGHNGEITSISFS 405
Score = 44.4 bits (100), Expect = 6e-05
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 49 FVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSG---NKVQIIPLRSAWVM 105
+ ++ TLK H +V +V +++ V+ SLD +D SG +V
Sbjct: 299 YTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYT 358
Query: 106 SVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILT 165
+ AF P G + G ++ ++DV ++ V + G+ G ++S F ++ + L
Sbjct: 359 AAAFHPDGLILGTGTAQSIVKIWDVKSQ------ANVAKFGGHNGEITSISFSENGYFLA 412
Query: 166 GSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDY 202
+ + +WDL K FD + V S Y
Sbjct: 413 TAALDGVRLWDLRKLKNFRTFDFPDANSVEFDHSGSY 449
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 51.6 bits (118), Expect = 4e-07
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSV-AFAPSG 113
LKGH V + ++GD + +T D + +W+ G ++ V V + +
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSG-DMKI 172
F +CGG D +DV +TG +++R+ G++G +++ +F D + ++ +G D +
Sbjct: 74 KFCSCGG-DRQVYYWDV----STG--RVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSL 126
Query: 173 CVWDLEAGKRE--MEFDAHAGDVVSISLS 199
VWD + E D V+S+ L+
Sbjct: 127 RVWDCRSHSVEPVQIIDTFLDTVMSVVLT 155
Score = 44.4 bits (100), Expect = 6e-05
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 48 RFVTKKTLKGHLNKVNSVHYSGD-SRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMS 106
R + KT K H +V VH + D ++ C G D ++ WD +G ++ V +
Sbjct: 49 RGILIKTYKSHGREVRDVHVTSDNAKFCSCGG-DRQVYYWDVSTGRVIRKFRGHDGEVNA 107
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTG 166
V F S + V G D V+D + + + V+ + + + S L T I+ G
Sbjct: 108 VKFNDSSSVVVSAGFDRSLRVWDCRSH----SVEPVQIIDTFLDTVMSV-VLTKTEIIGG 162
Query: 167 SGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
S D + +D+ G REM D V IS+S D
Sbjct: 163 SVDGTVRTFDMRIG-REMS-DNLGQPVNCISISND 195
Score = 38.7 bits (86), Expect = 0.003
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 7/127 (5%)
Query: 75 VTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRD 134
+ GS+DG + +D G ++ V ++ + GN V G +D+ + D
Sbjct: 160 IGGSVDGTVRTFDMRIGREMS--DNLGQPVNCISISNDGNCVLAGCLDSTLRLLD----R 213
Query: 135 ATGAAKMVRELAGYEGFLSSCRFLD-DTHILTGSGDMKICVWDLEAGKREMEFDAHAGDV 193
TG V + + F + C + D H++ GS D + WDL K +F AH V
Sbjct: 214 TTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVV 273
Query: 194 VSISLSP 200
S+S P
Sbjct: 274 TSVSYHP 280
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 51.6 bits (118), Expect = 4e-07
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 9/188 (4%)
Query: 16 TDLISKVKADQEKLADAKLAEKCSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSG-DSRHC 74
+D++ ++ D+E L +A + D G+ + T GH ++ ++ S D+
Sbjct: 28 SDVLREIDVDEEDLPEAD-DDDMDDDGEQFDENDDSVHTFTGHKGELYALACSPTDATLV 86
Query: 75 VTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRD 134
TG D K +W +G+ +P V +AF+ G +A GG+D + ++D
Sbjct: 87 ATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDA---- 142
Query: 135 ATGAAKMVRELAGYEGFLSSCRFLDDTHI-LTGSGDMKICVWDLEAGKREMEFDAHAGDV 193
++G K V L G + R+ HI L GS D + +W+ + F H +V
Sbjct: 143 SSGTLKCV--LDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNV 200
Query: 194 VSISLSPD 201
+PD
Sbjct: 201 TCGDFTPD 208
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 51 TKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFA 110
T + + H V S+ + G S++ TG +G + IWD+ GN V V +++ +
Sbjct: 320 TPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVS 379
Query: 111 PSGNFVACGGMDNMCTVYD 129
+ +F+ +DN V++
Sbjct: 380 TNTDFIVSVSVDNTARVFE 398
Score = 34.3 bits (75), Expect = 0.061
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 13/129 (10%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQII---PLRSAWVMSVAFAPSG 113
GH V ++ D + TGS D LI+W+ + + I+ P + + + +
Sbjct: 195 GHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNS 254
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHIL----TGSGD 169
+ G D +V+ VN TG K+V L + + +F + + TG D
Sbjct: 255 SLAISGSKDG--SVHIVN--IVTG--KVVSSLNSHTDSVECVKFSPSSATIPLAATGGMD 308
Query: 170 MKICVWDLE 178
K+ +WDL+
Sbjct: 309 KKLIIWDLQ 317
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 50.4 bits (115), Expect = 9e-07
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 76 TGSLDGKLIIWDTWSGNKVQ--IIPLRSAWVMSVAFAP-SGNFVACGGMDNMCTVYDVNN 132
+GS DG + +WD +G ++ + P A + SV F P G+ +A G D VYD+
Sbjct: 185 SGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRR 244
Query: 133 RDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVWDLEAGKR 182
+ L G+ ++ RF+D I+TGS D + WD++ G+R
Sbjct: 245 -----LVDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDIDNGRR 289
Score = 33.9 bits (74), Expect = 0.081
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQII---PLRSAWVMSVAFAP 111
L GH V + DS VTGS DG L WD +G +V + S + ++
Sbjct: 252 LDGHTKTVTYARFM-DSHTIVTGSTDGSLKQWDIDNGRRVVRTYRGHVNSRNFVGLSVWR 310
Query: 112 SGNFVACGGMDNMCTVYD 129
G V G +N VYD
Sbjct: 311 HGGLVVSGSENNQVFVYD 328
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 50.4 bits (115), Expect = 9e-07
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGM 121
VN++ S D + + ++ DT SG + + + S A+ P+G +A G
Sbjct: 280 VNNISTSPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQ 339
Query: 122 DNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMK-ICVWDLEAG 180
D C ++DV N ++ ++ L G G + + RF D L + + ++D EAG
Sbjct: 340 DTTCRLWDVRN-----LSQSLKVLKGNMGAIRALRFTSDGRFLAMAEPADFVHLFDTEAG 394
Query: 181 KREMEFDAHAGDVVSISLSPD 201
+ + G++ IS SPD
Sbjct: 395 YSQCQEIDLFGEIAGISFSPD 415
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 50.4 bits (115), Expect = 9e-07
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 7/147 (4%)
Query: 58 HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVM-SVAFAPSGNFV 116
HL VN++ + ++R VT S D L +W+ ++ I M S++ P+GN++
Sbjct: 411 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 470
Query: 117 ACGGMDNMCTVYDVNNRDATGAAKMVRELAGY--EGFLSSCRFL-DDTHILTGSGDMKIC 173
A +DN +Y R K AG+ G+ F D +++G G+ K
Sbjct: 471 AAQSLDNQILIYSTRERFQLNKKK---RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW 527
Query: 174 VWDLEAGKREMEFDAHAGDVVSISLSP 200
WD ++ K H G + P
Sbjct: 528 FWDWKSCKVFRTLKCHNGVCIGAEWHP 554
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 9/148 (6%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCV-TGSLDGKLIIWDTWSGNKVQIIPLRSAW-VMSVAFAP 111
T GH V+++ + H + + +D K+ IWD ++ K + A V + F+
Sbjct: 277 TWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSN 336
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH--ILTGSGD 169
G+ G D +D G ++ DD +L G D
Sbjct: 337 DGSKFLTAGYDKNIKYWDTETGQVISTFS-----TGKIPYVVKLNPDDDKQNILLAGMSD 391
Query: 170 MKICVWDLEAGKREMEFDAHAGDVVSIS 197
KI WD+ G+ E+D H G V +I+
Sbjct: 392 KKIVQWDINTGEVTQEYDQHLGAVNTIT 419
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL-RSAWVMSV-AFA 110
+T GH V + +S D +T D + WDT +G + + +V+ +
Sbjct: 320 RTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDD 379
Query: 111 PSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDT-HILTGSGD 169
N + G D +D+N + T +E + G +++ F+D+ +T S D
Sbjct: 380 DKQNILLAGMSDKKIVQWDINTGEVT------QEYDQHLGAVNTITFVDNNRRFVTSSDD 433
Query: 170 MKICVWD 176
+ VW+
Sbjct: 434 KSLRVWE 440
Score = 31.5 bits (68), Expect = 0.43
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 13/137 (9%)
Query: 47 IRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDT---WSGNKVQIIP--LRS 101
I V K + H++ + S+ + SLD +++I+ T + NK + + +
Sbjct: 443 IPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 502
Query: 102 AWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF--LD 159
+ V F+P G FV G + C +D + K+ R L + G + L+
Sbjct: 503 GYACQVNFSPDGRFVMSGDGEGKCWFWDWK------SCKVFRTLKCHNGVCIGAEWHPLE 556
Query: 160 DTHILTGSGDMKICVWD 176
+ + T D I WD
Sbjct: 557 QSKVATCGWDGLIKYWD 573
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 50.0 bits (114), Expect = 1e-06
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL-RSAWVMSVAFAP-SGN 114
G+ + SV +S D R V GS D + ++D N+V + + ++ V +V FA SGN
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDL-EANRVSLRTVAHTSDVNTVCFADESGN 285
Query: 115 FVACGGMDNMCTVYDVNNRDATGAAKMVRELAGY-EGFLSSCRFLDDTHILTGSGDMKIC 173
+ G DN+C V+D R G K L G+ EG D + ++ D I
Sbjct: 286 LILSGSDDNLCKVWD--RRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIK 343
Query: 174 VWDLEAGKREMEFDAHAGDVVSISLSPDY 202
+WD+ R+M A A V + DY
Sbjct: 344 LWDI----RKMSSSAPARHEVLRNYEWDY 368
Score = 37.1 bits (82), Expect = 0.009
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 14/149 (9%)
Query: 67 YSGDSRHCVTGSLDGKLIIWDTWSGNKVQ--IIPLRSAW-VMSVAFAPSGNFVACGGMDN 123
+S D + G ++ I++ G KVQ I+ W V + +P + M
Sbjct: 134 FSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLSPDQRNLVYASMSP 193
Query: 124 MCTVYDVNNRDATGAAKMVR----------ELAGYEGFLSSCRF-LDDTHILTGSGDMKI 172
+ + DV + A + E GY + S +F D ++ GS D I
Sbjct: 194 IVHIVDVGSGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTDGREVVAGSSDDSI 253
Query: 173 CVWDLEAGKREMEFDAHAGDVVSISLSPD 201
V+DLEA + + AH DV ++ + +
Sbjct: 254 YVYDLEANRVSLRTVAHTSDVNTVCFADE 282
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 151 FLSSCRFLDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDYHT 204
+ S +I TGS D + ++DL +G + H+ V + P Y T
Sbjct: 404 YFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPT 457
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD 87
L GHL V + GD R+ ++ D + +WD
Sbjct: 314 LVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 67 YSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
+S ++ TGS D + I+D SG+KV ++ S+ V + P
Sbjct: 409 HSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHP 453
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 5/125 (4%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGN-KVQIIPLRSAWVMSVAFAPSG 113
L+ H + + YS D +G + + ++WD + K+ + +A + S+A++P+
Sbjct: 352 LEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNN 411
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKIC 173
VA G +D VY+V+ A+ + + G +++ F+DD + + D +
Sbjct: 412 KMVATGSIDTCVIVYEVDK----PASSRITARNAHLGGVNAVAFIDDCTVASSGEDASVR 467
Query: 174 VWDLE 178
+W +E
Sbjct: 468 LWHIE 472
Score = 42.3 bits (95), Expect = 2e-04
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 12/164 (7%)
Query: 43 DVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSA 102
D P +F + + H N VN + YS D +T S D K +I+D +G+KV +
Sbjct: 37 DGPPFKFHSSH--REHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDG 94
Query: 103 W---VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGA---AKMVRELAGYEGFLSSCR 156
+ +V+++P V D V++V G+ E G E L C
Sbjct: 95 HKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCL 154
Query: 157 FLDDTHILTGS--GDMKICVWDLEAGKREMEFDAHAGDVVSISL 198
+ +D H++T S G M + D + K + H +V S+++
Sbjct: 155 WQND-HLITVSLGGTMSLFSAD-DMDKPPLLLSGHIKNVTSLAV 196
Score = 34.7 bits (76), Expect = 0.046
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 104 VMSVAFAPSGNF-VACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD-T 161
V+S AF P+ F +A G D + YD K + F++ R+ D T
Sbjct: 11 VLSCAFKPTRPFRIATCGEDFLVNFYD------GPPFKFHSSHREHSNFVNCIRYSPDGT 64
Query: 162 HILTGSGDMKICVWDLEAGKREMEF---DAHAGDVVSISLSPD 201
+T S D K ++D + G + E D H G + ++S SPD
Sbjct: 65 KFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPD 107
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 103 WVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF--LDD 160
+V+SVA++P+G +ACG MD V+DV+ +K++ +L G+ + S F +D
Sbjct: 160 FVLSVAWSPNGKRLACGSMDGTICVFDVDR------SKLLHQLEGHNMPVRSLVFSPVDP 213
Query: 161 THILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ +GS D + + D E H V+S+ SPD
Sbjct: 214 RVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPD 254
Score = 44.4 bits (100), Expect = 6e-05
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 6/140 (4%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGM 121
V SV +S + + GS+DG + ++D + + + V S+ F+P V G
Sbjct: 161 VLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGS 220
Query: 122 DNMCTVYDVNNRDATGAAKMVRELAGYEGF-LSSCRFLDDTHILTGSGDMKICVWDLEAG 180
D+ VN DA G ++ ++G+ + LS D I TGS D + +WDL+
Sbjct: 221 DDG----HVNMHDAEGKT-LLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMR 275
Query: 181 KREMEFDAHAGDVVSISLSP 200
H V S++ P
Sbjct: 276 AAIQTMSNHNDQVWSVAFRP 295
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 55 LKGHLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
L+GH V S+ +S D R +GS DG + + D + + ++WV+SV +P G
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 114 NFVACGGMDNMCTVYDVNNRDA 135
+A G D ++D+ R A
Sbjct: 256 GAIATGSSDRTVRLWDLKMRAA 277
Score = 35.9 bits (79), Expect = 0.020
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
++ GH + V SV S D TGS D + +WD +Q + + V SVAF P G
Sbjct: 238 SMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPG 297
Score = 30.3 bits (65), Expect = 0.99
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 75 VTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVN 131
+TGSLD + +W + V+ S V ++A PSG A +D+ V+DV+
Sbjct: 34 LTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVD 90
Score = 29.1 bits (62), Expect = 2.3
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 9/157 (5%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
+T GH V ++ + S+D + ++D + + ++ + V + F P
Sbjct: 54 RTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPK 113
Query: 113 GNFVA-CGGMDNMCTVYDVNNRDATGAAKMVR-ELAGYEGFLSSCRFL-------DDTHI 163
G +A GG ++D + + R + SS +F+ + +
Sbjct: 114 GTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRL 173
Query: 164 LTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
GS D ICV+D++ K + + H V S+ SP
Sbjct: 174 ACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSP 210
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 47.6 bits (108), Expect = 6e-06
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 44 VPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAW 103
V +IRF GH V SV + V+G D + +WDT SG ++ +
Sbjct: 253 VIEIRFGVMPCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNI 312
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF--LDDT 161
V+SV + +GN++ D + +YD+ K ++ G+ ++S + +
Sbjct: 313 VLSVKWNQNGNWLLTASKDQIIKLYDIR------TMKELQSFRGHTKDVTSLAWHPCHEE 366
Query: 162 HILTGSGDMKICVWDLEAGKREMEF-DAHAGDVVSISLSP 200
+ ++GS D IC W + ++E +AH V ++ P
Sbjct: 367 YFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHP 406
Score = 39.5 bits (88), Expect = 0.002
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 10/153 (6%)
Query: 43 DVPKIRFVTKKTLKGHLNK----VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIP 98
D P F K + LNK +N V ++ R +TGS G+ +W+ S N I+
Sbjct: 104 DNPSTSFAAK-FVHASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQ 162
Query: 99 LRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL 158
+ S+ ++ + N++ G D Y NN + A K + + + LS C+
Sbjct: 163 AHDQPIRSMVWSHNENYMVSGD-DGGTLKYWQNNMNNVKANKTAHKESIRD--LSFCK-- 217
Query: 159 DDTHILTGSGDMKICVWDLEAGKREMEFDAHAG 191
D + S D + VWD E + G
Sbjct: 218 TDLKFCSCSDDTTVKVWDFTKCVDESSLTGYIG 250
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 46.8 bits (106), Expect = 1e-05
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 51 TKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQI---IPLRSAWVMSV 107
T + L H N+V V +S ++ T S D IIW NKV++ + V V
Sbjct: 216 TVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFV 275
Query: 108 AFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYE--GF-LSSCR-FLDDTHI 163
+++P + G + ++DV+ TG ++R G GF +SSC F D T +
Sbjct: 276 SWSPDDTKLLTCGNAEVLKLWDVD----TG---VLRHTFGNNNTGFTVSSCAWFPDSTRL 328
Query: 164 LTGSGDMK--ICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ GS D + I +WD + + + VV ++++PD
Sbjct: 329 VCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPD 368
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 158 LDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
LD + I +GS D ++ +W+L+ K H+ V +S +P
Sbjct: 453 LDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNP 495
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 97 IPLRSAWV-MSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSC 155
+PL +AW+ + GNFVA G M++ ++D++ + + +AG F +
Sbjct: 163 LPLCTAWLDCPLKGGGKGNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTF 222
Query: 156 RFLDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSIS 197
+ + + +GS D K+ VWD+ GK ++ + H V +++
Sbjct: 223 NWENRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVA 264
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 76 TGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDA 135
+ D +WD + + I V+SV F+P+G +A GG DN C ++D+ R
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMR-- 204
Query: 136 TGAAKMVRELAGYEGFLSSCRF--LDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDV 193
K++ + + +S ++ + + T S DM + +W H V
Sbjct: 205 ----KLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKV 260
Query: 194 VSISLSPDYHTDK 206
S+ ++ D + K
Sbjct: 261 ASLDIAVDSSSRK 273
Score = 41.5 bits (93), Expect = 4e-04
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 9/142 (6%)
Query: 16 TDLISKV-KADQEKLADAKLAEKCSDLGDVPKIRFVTKKTL-KGHLNKVNSVHYSGDSRH 73
TD K+ K D L K + L V +R + +GH+ +V SV +S + H
Sbjct: 127 TDRTEKIWKTDGTLLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYH 186
Query: 74 CVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN-FVACGGMDNMCTVYDVNN 132
+G D + IWD + IIP V V + P F+A D ++ +
Sbjct: 187 LASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIW--SG 244
Query: 133 RDATGAAKMVRELAGYEGFLSS 154
RD + +V+ L G+E ++S
Sbjct: 245 RDFS----LVKSLVGHESKVAS 262
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 46.8 bits (106), Expect = 1e-05
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 43 DVPKIRFVTKKTLKGHLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRS 101
DV + + VT+ +K H +V S+ YS D +GS DG + +W G + I +
Sbjct: 562 DVARNQLVTE--MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK- 618
Query: 102 AWVMSVAF-APSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD 160
A + V F + +G +A G D+ YD+ N + + G+ +S RF+D
Sbjct: 619 ANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLP-----LCTMIGHHKTVSYVRFVDS 673
Query: 161 THILTGSGDMKICVWDL 177
+ +++ S D + +WDL
Sbjct: 674 STLVSSSTDNTLKLWDL 690
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 46.8 bits (106), Expect = 1e-05
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Query: 43 DVPKIRFVTKKTLKGHLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRS 101
DV + + VT+ +K H +V S+ YS D +GS DG + +W G + I +
Sbjct: 562 DVARNQLVTE--MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK- 618
Query: 102 AWVMSVAF-APSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD 160
A + V F + +G +A G D+ YD+ N + + G+ +S RF+D
Sbjct: 619 ANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLP-----LCTMIGHHKTVSYVRFVDS 673
Query: 161 THILTGSGDMKICVWDL 177
+ +++ S D + +WDL
Sbjct: 674 STLVSSSTDNTLKLWDL 690
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 8/141 (5%)
Query: 43 DVPK-IRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRS 101
DV K F +++ KV H+S D + + D K ++W T + + +
Sbjct: 634 DVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHT 693
Query: 102 AWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF--LD 159
A + + F+PS +A D V+D +N+ + +R G+ ++S F +
Sbjct: 694 AMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYS-----LRTFMGHSSMVTSLDFHPIK 748
Query: 160 DTHILTGSGDMKICVWDLEAG 180
D I + D +I W + G
Sbjct: 749 DDLICSCDNDNEIRYWSINNG 769
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 152 LSSCRFLDDTHILTGSG-DMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
++ C F D +L +G D K +W + K + + H + I SP
Sbjct: 654 VTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSP 703
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 45.6 bits (103), Expect = 2e-05
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 8/141 (5%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGM 121
V S+ S S V G DG + IWDT G V ++ + G+ +A G
Sbjct: 68 VTSIASSASSLVAV-GYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSK 126
Query: 122 DNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD-THILTGSGDMKICVWDLEAG 180
DN ++DV G + + R L G+ ++ FLD +++ S D + VWDLE
Sbjct: 127 DNDIILWDV-----VGESGLFR-LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQ 180
Query: 181 KREMEFDAHAGDVVSISLSPD 201
H +V S+ P+
Sbjct: 181 HCMQIVSGHHSEVWSVDTDPE 201
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
L+GH ++V + + + V+ S D L +WD + + +QI+ + V SV P
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 115 FVACGGMDNMCTVYDVNNRDATGA 138
+V G D Y V + G+
Sbjct: 204 YVVTGSADQELRFYAVKEYSSNGS 227
Score = 33.9 bits (74), Expect = 0.081
Identities = 23/78 (29%), Positives = 34/78 (43%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
+L GH V + S D VTGS D L IW G+ + I VM V F +
Sbjct: 577 SLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNT 636
Query: 114 NFVACGGMDNMCTVYDVN 131
+++ G D + +D +
Sbjct: 637 HYLFSIGKDRLVKYWDAD 654
Score = 30.7 bits (66), Expect = 0.75
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH- 162
V++VA +P +A +D+ V+ +++ K L G++ + D
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDS------LKFYLSLYGHKLPVMCIDISSDGEL 596
Query: 163 ILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDYH 203
I+TGS D + +W L+ G AH V+ + + H
Sbjct: 597 IVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTH 637
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/76 (19%), Positives = 29/76 (38%)
Query: 58 HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVA 117
H V ++ Y+ +GS D +I+WD + + + V + F G +
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 118 CGGMDNMCTVYDVNNR 133
D V+D+ +
Sbjct: 165 SSSKDKFLRVWDLETQ 180
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF-LDDTH 162
++ +P ++A D +++++ K+ + L G+E ++ C F +D +
Sbjct: 220 ILKCLLSPGNKYLATASSDKTVKIWNLDG------FKLEKVLTGHERWVWDCDFSMDGEY 273
Query: 163 ILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
++T S D +W + AGK EM + AH V +L D
Sbjct: 274 LVTASSDTTARLWSMRAGKEEMVYQAHRKATVCCTLLRD 312
Score = 34.7 bits (76), Expect = 0.046
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 3/146 (2%)
Query: 59 LNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSG-NKVQIIPLRSAWVMSVAFAPSGNFVA 117
++ VN+V + ++G +G + +WD + +++P + S+ G V
Sbjct: 125 VSPVNTVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVV 184
Query: 118 CGGMDNMCTVY-DVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTHILTGSGDMKICVW 175
C V+ + R + + +L + + C + ++ T S D + +W
Sbjct: 185 AANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIW 244
Query: 176 DLEAGKREMEFDAHAGDVVSISLSPD 201
+L+ K E H V S D
Sbjct: 245 NLDGFKLEKVLTGHERWVWDCDFSMD 270
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 49 FVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQI 96
F +K L GH V +S D + VT S D +W +G + +
Sbjct: 249 FKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMV 296
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 44.8 bits (101), Expect = 4e-05
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 58 HLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP-SGNF 115
H + SV +S + V+GS D K+ +W T V I ++ A + V + P S N+
Sbjct: 462 HEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMK-ANICCVKYNPGSSNY 520
Query: 116 VACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVW 175
+A G D+ YD+ N ++ + +G++ +S +FL + + + S D + +W
Sbjct: 521 IAVGSADHHIHYYDLRN-----ISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLW 575
Query: 176 DLEAGKREMEFDAHAGD--VVSISLSPDY 202
D++ F H + V ++++ +Y
Sbjct: 576 DVKDNLPVRTFRGHTNEKNFVGLTVNSEY 604
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 44.4 bits (100), Expect = 6e-05
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDT---WSGNK---VQIIPLRSAWVMS 106
+++ H + +NSV SG TGS DG + +W G K Q++ + V +
Sbjct: 271 ESIHAHDDAINSV-MSGFDDLVFTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTA 329
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTG 166
+A + V CG D + ++ + R TG L G++ + C + +L+G
Sbjct: 330 LAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGI-----LKGHKSAVL-CLGIAGNLLLSG 383
Query: 167 SGDMKICVW 175
S D ICVW
Sbjct: 384 SADKNICVW 392
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 44.4 bits (100), Expect = 6e-05
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 50 VTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
VTK G + V SV ++ H G+ GK+ IWD + + + V ++A+
Sbjct: 243 VTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAW 302
Query: 110 APSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF-LDDTHILTGSG 168
S ++ G D + RD V +LAG++ + ++ D+ + +G
Sbjct: 303 GSS--VLSSGSRDK-----SILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGN 355
Query: 169 DMKICVWDLEAGKREMEFDAHAGDVVSISLSPDYH 203
D ++ VW+ + + +++ H V +I+ SP H
Sbjct: 356 DNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 7/153 (4%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP--S 112
L GH ++V + +S D+R +G D +L +W+ S V +A V ++A++P
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 113 GNFVACGGMDNMC-TVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMK 171
G + GG + C ++ + ++ + + L TH G +
Sbjct: 391 GLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCNL-AWSKNVNELVSTH---GYSQNQ 446
Query: 172 ICVWDLEAGKREMEFDAHAGDVVSISLSPDYHT 204
I VW + H V+ +++SPD T
Sbjct: 447 IIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQT 479
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQ 95
TL GH +V + S D + VTG+ D L W+ + K Q
Sbjct: 460 TLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQ 501
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 44.0 bits (99), Expect = 8e-05
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 58 HLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSA--WVMSVAFAPSGN 114
H N V SV ++ D H ++GS+DGK+ I WS ++ Q++ A V +V + P G
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRI---WSASQCQVVDWADARGIVTAVCYQPDGQ 451
Query: 115 FVACGGMDNMCTVYDVN 131
V G + + C Y+V+
Sbjct: 452 AVIIGTLTSDCRFYNVS 468
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF--LDDTHILTGSGDMK 171
N + +DN ++ + D G + + +++S +F +DD H ++GS D K
Sbjct: 368 NRLLSASVDNSVRLWQIGCEDCLG-------IFSHNNYVTSVQFNPVDDDHFISGSIDGK 420
Query: 172 ICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ +W + DA G V ++ PD
Sbjct: 421 VRIWSASQCQVVDWADAR-GIVTAVCYQPD 449
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 44.0 bits (99), Expect = 8e-05
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 58 HLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSA--WVMSVAFAPSGN 114
H N V SV ++ D H ++GS+DGK+ I WS ++ Q++ A V +V + P G
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRI---WSASQCQVVDWADARGIVTAVCYQPDGQ 451
Query: 115 FVACGGMDNMCTVYDVN 131
V G + + C Y+V+
Sbjct: 452 AVIIGTLTSDCRFYNVS 468
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF--LDDTHILTGSGDMK 171
N + +DN ++ + D G + + +++S +F +DD H ++GS D K
Sbjct: 368 NRLLSASVDNSVRLWQIGCEDCLG-------IFSHNNYVTSVQFNPVDDDHFISGSIDGK 420
Query: 172 ICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ +W + DA G V ++ PD
Sbjct: 421 VRIWSASQCQVVDWADAR-GIVTAVCYQPD 449
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGS-LDGKLIIWDTWSGN--KVQIIPLRSAWVMSVAFA 110
+L GH V ++ +S H + + LDG + +W+ WS + KV+ +A V V ++
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWS 214
Query: 111 PSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDM 170
G + G D ++DV T + K + + +C L+G
Sbjct: 215 KQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDNCNV-----FLSGGSKG 269
Query: 171 KICVWDLEAGKREMEFDAHAGDVVSI 196
+ +WD+ A K E+ G ++ +
Sbjct: 270 SLRLWDIRANKFVHEYVRDLGPILDV 295
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 43.2 bits (97), Expect = 1e-04
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 11/144 (7%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAW-----VMSVAFAPSGN-F 115
V+ + G S +GS DG + +WD + + +R A V V F PSG
Sbjct: 25 VDYTRHGGASTVGASGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPA 84
Query: 116 VACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVW 175
VA G D VYD+ L G+ +S RFLD ++T D + +W
Sbjct: 85 VAVGCADRKGYVYDIRK-----LVDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKLW 139
Query: 176 DLEAGKREMEFDAHAGDVVSISLS 199
+E G+ ++ H + + LS
Sbjct: 140 SVEDGRVIRTYEGHVNNRNFVGLS 163
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 43.2 bits (97), Expect = 1e-04
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 7/153 (4%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS-- 112
LKGH +++ + +S D+R +G D KL +W+ S V +A V ++A++P
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 113 GNFVACGGMDNMC-TVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMK 171
G + GG + C ++ ++ + + L TH G +
Sbjct: 348 GLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLV-WSKNVNELVSTH---GYSQNQ 403
Query: 172 ICVWDLEAGKREMEFDAHAGDVVSISLSPDYHT 204
I VW + H+ V+ +++SPD T
Sbjct: 404 IIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQT 436
Score = 40.7 bits (91), Expect = 7e-04
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 50 VTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
VTK G V SV ++ H G+ G + IWD ++ + V ++A+
Sbjct: 200 VTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAW 259
Query: 110 APSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF-LDDTHILTGSG 168
S + ++ G D + RD V +L G++ + ++ D+ + +G
Sbjct: 260 --SSSVLSSGSRDK-----SILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGN 312
Query: 169 DMKICVWDLEAGKREMEFDAHAGDVVSISLSPDY 202
D K+ VW+ + + + F HA V +I+ SP +
Sbjct: 313 DNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHH 346
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQ 95
TL GH +V + S D + VTG+ D L W+ + K Q
Sbjct: 417 TLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQ 458
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 43.2 bits (97), Expect = 1e-04
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Query: 56 KGHLNKVNSV--HYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
+GH + + V H ++ G DG+L+IWDT + + + V ++F P
Sbjct: 214 EGHESAIADVSWHMKNENLFGSAGE-DGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFN 272
Query: 114 NFV-ACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH--ILTGSG-D 169
+V A D+ ++D+ +A + ++ +EG + + D H +L SG D
Sbjct: 273 EWVLATASSDSTVALFDLRKLNAP-----LHVMSSHEGEVFQVEW-DPNHETVLASSGED 326
Query: 170 MKICVWDL-EAGKREMEFDAHAGD 192
++ VWDL G+ ++E + A D
Sbjct: 327 RRLMVWDLNRVGEEQLEIELDAED 350
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 149 EGFLSSCRFLDDTHILTGSGDMKICVWDLEAGKREMEFDA 188
EG+ S + ++L+GS D KIC+WD+ A ++ +A
Sbjct: 170 EGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNA 209
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 42.7 bits (96), Expect = 2e-04
Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 10/135 (7%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
TL GH V +V ++ T D + +WD G + I + A A
Sbjct: 157 TLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEG--LSIAASKPLGCTIRALAADT 214
Query: 114 NFVACGGMDNMCTVYDV-----NNRDATGAAKMVRE--LAGYEGFLSSCRFLDDTHILTG 166
+ GG D + N D TG K E L G+EG ++S LD T I +G
Sbjct: 215 KLLVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLA-LDMTSIFSG 273
Query: 167 SGDMKICVWDLEAGK 181
S DM + +WD + K
Sbjct: 274 SWDMSVRIWDRSSMK 288
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 51 TKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQI---IPLRSAWVMSV 107
T + L+ H ++V + +S + ++ + S D IIW+ + + + + V+++
Sbjct: 266 TAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAI 325
Query: 108 AFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH-ILTG 166
++P V G + + +DV++ D + E G SC + D I+ G
Sbjct: 326 LWSPDDRQVLTCGAEEVIRRWDVDSGDCVH----MYEKGGISPI--SCGWYPDGQGIIAG 379
Query: 167 SGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
D IC+WDL+ ++E V I+++ D
Sbjct: 380 MTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDD 414
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 163 ILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
I +GS D ++ +W GK +E HAG V +S SP
Sbjct: 504 IASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSP 541
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 42.3 bits (95), Expect = 2e-04
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 58 HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVA 117
+L VN S D + D ++ DT +G + + + + A+ P+G A
Sbjct: 276 YLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFA 335
Query: 118 CGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD-THILTGSGDMKICVWD 176
G D C ++D ++ V L G G + S RF D ++ + ++D
Sbjct: 336 TGNQDKTCRIWDTRK-----LSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYD 390
Query: 177 LEAG-KREMEFDAHAGDVVSISLSPD 201
++G K+E E D G++ IS SPD
Sbjct: 391 TKSGYKKEQEID-FFGEISGISFSPD 415
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
LKG+L V S+ ++ D R+ + I+DT SG K + + ++F+P
Sbjct: 358 LKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSPDTE 417
Query: 115 FVACGGMD 122
+ G D
Sbjct: 418 SLFIGVWD 425
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 42.3 bits (95), Expect = 2e-04
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 58 HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVA 117
+L VN S D + D ++ DT +G + + + + A+ P+G A
Sbjct: 270 YLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFA 329
Query: 118 CGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD-THILTGSGDMKICVWD 176
G D C ++D ++ V L G G + S RF D ++ + ++D
Sbjct: 330 TGNQDKTCRIWDTRK-----LSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYD 384
Query: 177 LEAG-KREMEFDAHAGDVVSISLSPD 201
++G K+E E D G++ IS SPD
Sbjct: 385 TKSGYKKEQEID-FFGEISGISFSPD 409
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
LKG+L V S+ ++ D R+ + I+DT SG K + + ++F+P
Sbjct: 352 LKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSPDTE 411
Query: 115 FVACGGMD 122
+ G D
Sbjct: 412 SLFIGVWD 419
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 42.3 bits (95), Expect = 2e-04
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSG-NKVQIIPLRSAWVMSVAFAPS 112
+L GH V+SV + + + S D + WD +G + + + ++ + V S
Sbjct: 267 SLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GES 324
Query: 113 GNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDT--HILTGSGDM 170
+A GG D + V+D G + V + + + ++S+C++ + H+L+ S D
Sbjct: 325 SALIAAGGSDPILRVWDPRK---PGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDG 381
Query: 171 KICVWDLEAGKREMEFDAHAGDVVS 195
KI +WDL D H V+S
Sbjct: 382 KIMLWDLRTAWPLSVIDTHNDKVLS 406
Score = 30.3 bits (65), Expect = 0.99
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 73 HCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDN 123
H ++ S DGK+++WD + + +I + V+S + G V GG D+
Sbjct: 373 HLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWW-KGESVVSGGADS 422
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 42.3 bits (95), Expect = 2e-04
Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 49 FVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVA 108
FV+K L GH ++V + +S D R +G D +L++W+ S + + +A V ++
Sbjct: 290 FVSK--LVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAIT 347
Query: 109 FAP-SGNFVACGG--MDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILT 165
++P + +A GG D ++ N + + ++ + + + TH
Sbjct: 348 WSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQVCNL-AWSKNVNEIVSTH--- 403
Query: 166 GSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDYHT 204
G +I +W + + H+ V+ ++ SPD T
Sbjct: 404 GYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQT 442
Score = 36.7 bits (81), Expect = 0.011
Identities = 30/152 (19%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 50 VTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
VTK G + V SV ++ + + G+ G++ +WD +V+ + +
Sbjct: 206 VTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVR--TMGGHQTRTGVL 263
Query: 110 APSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTHILTGSG 168
A + ++ G D +D+ + + V +L G++ + ++ DD + +G
Sbjct: 264 AWNSRILSSGSRDRNILQHDIRVQ-----SDFVSKLVGHKSEVCGLKWSHDDRELASGGN 318
Query: 169 DMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
D ++ VW+ + + ++ H V +I+ SP
Sbjct: 319 DNQLLVWNNHSQQPILKLTEHTAAVKAITWSP 350
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSV 107
TL GH +V + S D + VTG+ D L W+ + K+Q P++ + S+
Sbjct: 423 TLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVKMQ-TPVKDTGLWSL 475
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 42.3 bits (95), Expect = 2e-04
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 73 HCVTGSLDGKLIIWDTWSGN-KVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVN 131
H + G DG +++WD + + + S V+S++ A S + GG D+ +Y++N
Sbjct: 233 HVLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGGISGGADDKIVMYNLN 292
Query: 132 NRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSG-DMKICVWDLEAGKREMEFDAHA 190
+ +TG+ + +E+ +S D I +G D +I V++ G H
Sbjct: 293 H--STGSCTIRKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHR 350
Query: 191 GDVVSISLSPD 201
++S SPD
Sbjct: 351 ATCNAVSYSPD 361
Score = 35.5 bits (78), Expect = 0.026
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQI--IPLRSAWVMSVAFAP- 111
L+GH + V V + TGS DG+L IWDT V R+ V++VA +P
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPW 72
Query: 112 -SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGY 148
+ + G D +D+ + + ++ E Y
Sbjct: 73 LGEDKIISQGRDGTVKCWDIEDGGLSRDPLLILETCAY 110
Score = 29.1 bits (62), Expect = 2.3
Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 9/128 (7%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD----TWSGNKVQIIPLRSAWVMSVAF 109
++K H V S+ + ++G D K+++++ T S + I L V +
Sbjct: 257 SVKFHSEPVLSLSVASSCDGGISGGADDKIVMYNLNHSTGSCTIRKEITLERPGVSGTSI 316
Query: 110 APSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGD 169
G A G D+ VY+ +A K R + C + + S D
Sbjct: 317 RVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELM-----ASASED 371
Query: 170 MKICVWDL 177
+ +W L
Sbjct: 372 ATVALWKL 379
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 41.9 bits (94), Expect = 3e-04
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 7/139 (5%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGM 121
V ++ ++G+ TGS DG+ IW T +G + + + S+ + G+++ G +
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSV 385
Query: 122 DNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVWDLEAGK 181
D V+DV A + ++ + G + ++ T S D I + + +
Sbjct: 386 DRTAVVWDVK------AEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETR 439
Query: 182 REMEFDAHAGDVVSISLSP 200
F H G+V + P
Sbjct: 440 PAKTFTGHQGEVNCVKWDP 458
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 6/101 (5%)
Query: 76 TGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDA 135
+ S D + +WD G + V S+AF+P+G ++A G +D ++ +
Sbjct: 516 SASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKE--- 572
Query: 136 TGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVWD 176
K+V+ G G C + I D +CV D
Sbjct: 573 ---GKIVKTYTGNGGIFEVCWNKEGNKIAACFADNSVCVLD 610
Score = 38.3 bits (85), Expect = 0.004
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 25/162 (15%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD--------TWSGNKVQIIPLRSAW- 103
+ L+GH ++V + +S + +GS D IW +G + + L+ A
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKG 318
Query: 104 --------VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSC 155
V ++ + G +A G D ++ +N +++ L+ ++G + S
Sbjct: 319 KSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNG-------ELISTLSKHKGPIFSL 371
Query: 156 RF-LDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSI 196
++ ++LTGS D VWD++A + + +F+ H+G + +
Sbjct: 372 KWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDV 413
Score = 35.5 bits (78), Expect = 0.026
Identities = 28/148 (18%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
TL H + S+ ++ + +TGS+D ++WD + Q S + V + +
Sbjct: 360 TLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNV 419
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTG-SGDMKI 172
+F A D+M + + G + + G++G ++ ++ +L S D
Sbjct: 420 SF-ATSSTDSMIYLCKI------GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTA 472
Query: 173 CVWDLEAGKREMEFDAHAGDVVSISLSP 200
+W+++ + H ++ +I SP
Sbjct: 473 KIWNIKQSTFVHDLREHTKEIYTIRWSP 500
Score = 34.7 bits (76), Expect = 0.046
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
+ GH V S+ +S + + +GSLD + IW G V+ + + V + G
Sbjct: 536 SFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTY-TGNGGIFEVCWNKEG 594
Query: 114 NFVACGGMDNMCTVYD 129
N +A DN V D
Sbjct: 595 NKIAACFADNSVCVLD 610
Score = 31.1 bits (67), Expect = 0.57
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 163 ILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ + S D + +WD E GK F+ H V S++ SP+
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPN 552
Score = 29.9 bits (64), Expect = 1.3
Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 16/149 (10%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
KT GH +VN V + + S D IW+ V + + + ++ ++P+
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPT 501
Query: 113 GN---------FVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTH 162
G +A D+ ++D KM+ G+ + S F + +
Sbjct: 502 GPGTNNPNKQLTLASASFDSTVKLWDAE------LGKMLCSFNGHREPVYSLAFSPNGEY 555
Query: 163 ILTGSGDMKICVWDLEAGKREMEFDAHAG 191
I +GS D I +W ++ GK + + G
Sbjct: 556 IASGSLDKSIHIWSIKEGKIVKTYTGNGG 584
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
TL GHL+ + +V + ++ V+ S D + IW+ S + ++ + +VM +F P
Sbjct: 88 TLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
Query: 114 NFVACGGMDNMCTVYDV 130
+ V +D V+D+
Sbjct: 148 DLVVSASLDQTVRVWDI 164
Score = 35.5 bits (78), Expect = 0.026
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
TL+GH+N V+SV + V+ S D + +WD +Q +A P
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEI 302
Query: 114 NFVACGGMDNM 124
N +A G + M
Sbjct: 303 NLLAAGHDNGM 313
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/127 (18%), Positives = 52/127 (40%), Gaps = 7/127 (5%)
Query: 58 HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVA 117
H V VH+ V+G D K+ +W+ + + + ++ +V F ++
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 118 CGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF-LDDTHILTGSGDMKICVWD 176
D +++ +R + L G+ ++ F + +++ S D + VWD
Sbjct: 110 SASDDQTIRIWNWQSRTC------ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
Query: 177 LEAGKRE 183
+ A K++
Sbjct: 164 IGALKKK 170
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 42 GDVPKIR-FVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLR 100
G+ P + + TL+GH V +++S D +GSLD + IW+ +G ++
Sbjct: 100 GEAPDVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGH 159
Query: 101 SAWVMSVAFAPSGNFVACGGMDNMCTVY 128
+ V V + P G+F+A D ++
Sbjct: 160 LSLVKGVTWDPIGSFIASQSDDKTVIIW 187
Score = 30.7 bits (66), Expect = 0.75
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDT-H 162
+ S+ P+G A GG D+ D+ N D +++ L + G ++ R+ ++ +
Sbjct: 16 IFSIDVQPNGERFATGGGDHKSVDKDLQNIDT--KERLLATLRDHFGSVNCVRWAKNSRY 73
Query: 163 ILTGSGDMKICVWDLEAGKREMEF-DAHAGDV 193
+ +GS D I + + + G EF A DV
Sbjct: 74 VASGSDDQVIQIHERKPGSGTTEFGSGEAPDV 105
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGN 92
TL+ H VN V ++ +SR+ +GS D + I + G+
Sbjct: 54 TLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGS 92
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
TL GHL+ + +V + + V+ S D + IW+ S V ++ + +VM +F P
Sbjct: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKE 147
Query: 114 NFVACGGMDNMCTVYDV 130
+ V +D V+D+
Sbjct: 148 DLVVSASLDQTVRVWDI 164
Score = 34.7 bits (76), Expect = 0.046
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
TL+GH+N V+SV + V+ S D + +WD +Q +A P
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEM 302
Query: 114 NFVACG 119
N +A G
Sbjct: 303 NLLAAG 308
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 41.1 bits (92), Expect = 5e-04
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGM 121
VN+ S D + + +I D+ SG + + + + A+ P+G +A G
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQ 310
Query: 122 DNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMK-ICVWDLEAG 180
D C ++D+ N + A L G G + +F + L + + ++D ++G
Sbjct: 311 DTACRLWDIRNPSESFAV-----LKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSG 365
Query: 181 -KREMEFDAHAGDVVSISLSPD 201
+ E D G++ IS SPD
Sbjct: 366 FLQSQEIDLF-GEIAGISFSPD 386
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
L+GH + V + R C++GS D + +WD + + + V ++A PS +
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 115 FVACGGMDNMCTVYDVNNRDA 135
V GG D + D+ R++
Sbjct: 311 HVYSGGRDQCLYLTDLATRES 331
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 51 TKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFA 110
T KGH V ++ + V+G + L +WD +G+K + + V +
Sbjct: 205 TPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLD 264
Query: 111 PSGNFVACGGMDNMCTVYDVNNR 133
+G F G D+M ++D+ +
Sbjct: 265 STGRFCLSGSSDSMIRLWDLGQQ 287
Score = 31.1 bits (67), Expect = 0.57
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDT-- 161
V ++A +G + GG + + V+D TG+ M +L G+ + LD T
Sbjct: 216 VYALAMNDTGTMLVSGGTEKVLRVWDPR----TGSKSM--KLRGHTDNVRVL-LLDSTGR 268
Query: 162 HILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDY 202
L+GS D I +WDL + + H V +++ +P +
Sbjct: 269 FCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSF 309
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
L+GH + V + R C++GS D + +WD + + + V ++A PS +
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 115 FVACGGMDNMCTVYDVNNRDA 135
V GG D + D+ R++
Sbjct: 311 HVYSGGRDQCLYLTDLATRES 331
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 51 TKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFA 110
T KGH V ++ + V+G + L +WD +G+K + + V +
Sbjct: 205 TPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLD 264
Query: 111 PSGNFVACGGMDNMCTVYDVNNR 133
+G F G D+M ++D+ +
Sbjct: 265 STGRFCLSGSSDSMIRLWDLGQQ 287
Score = 31.1 bits (67), Expect = 0.57
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDT-- 161
V ++A +G + GG + + V+D TG+ M +L G+ + LD T
Sbjct: 216 VYALAMNDTGTMLVSGGTEKVLRVWDPR----TGSKSM--KLRGHTDNVRVL-LLDSTGR 268
Query: 162 HILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDY 202
L+GS D I +WDL + + H V +++ +P +
Sbjct: 269 FCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSF 309
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 5/151 (3%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK-VQIIPLRSAWVMSVAFAP 111
K + H + + V + ++ S D + +WD +G QI S +VM V F P
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 112 SG-NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDM 170
N A +D ++++ + D ++ + + D +++TGS D
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG---DKPYLITGSDDH 209
Query: 171 KICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
VWD + D H +V ++ P+
Sbjct: 210 TAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240
Score = 37.5 bits (83), Expect = 0.007
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 10/157 (6%)
Query: 47 IRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMS 106
+R K+ +V SV + G + IW+ + + + V S
Sbjct: 3 LRLDIKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRS 62
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDT--HIL 164
F P +V G D VY+ N D V+ + ++ C + T ++L
Sbjct: 63 AKFIPRKQWVVAGADDMYIRVYNYNTMD------KVKVFEAHSDYI-RCVAVHPTLPYVL 115
Query: 165 TGSGDMKICVWDLEAGKREME-FDAHAGDVVSISLSP 200
+ S DM I +WD E G + F+ H+ V+ + +P
Sbjct: 116 SSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Score = 37.1 bits (82), Expect = 0.009
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Query: 54 TLKGHLNKVNSVHY--SGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
TL H VN V Y GD + +TGS D +WD + + VQ + + V +V F P
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCR 156
+ G D ++ E G++ S R
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSR 284
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
+TL GH + V++V + + +TGS DG + IW
Sbjct: 223 QTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 5/151 (3%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK-VQIIPLRSAWVMSVAFAP 111
K + H + + V + ++ S D + +WD +G QI S +VM V F P
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 112 SG-NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDM 170
N A +D ++++ + D ++ + + D +++TGS D
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG---DKPYLITGSDDH 209
Query: 171 KICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
VWD + D H +V ++ P+
Sbjct: 210 TAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240
Score = 37.5 bits (83), Expect = 0.007
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 10/157 (6%)
Query: 47 IRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMS 106
+R K+ +V SV + G + IW+ + + + V S
Sbjct: 3 LRLDIKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRS 62
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDT--HIL 164
F P +V G D VY+ N D V+ + ++ C + T ++L
Sbjct: 63 AKFIPRKQWVVAGADDMYIRVYNYNTMD------KVKVFEAHSDYI-RCVAVHPTLPYVL 115
Query: 165 TGSGDMKICVWDLEAGKREME-FDAHAGDVVSISLSP 200
+ S DM I +WD E G + F+ H+ V+ + +P
Sbjct: 116 SSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Score = 37.1 bits (82), Expect = 0.009
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Query: 54 TLKGHLNKVNSVHY--SGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
TL H VN V Y GD + +TGS D +WD + + VQ + + V +V F P
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCR 156
+ G D ++ E G++ S R
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSR 284
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
+TL GH + V++V + + +TGS DG + IW
Sbjct: 223 QTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 5/151 (3%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK-VQIIPLRSAWVMSVAFAP 111
K + H + + V + ++ S D + +WD +G QI S +VM V F P
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 112 SG-NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDM 170
N A +D ++++ + D ++ + + D +++TGS D
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG---DKPYLITGSDDH 209
Query: 171 KICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
VWD + D H +V ++ P+
Sbjct: 210 TAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240
Score = 37.5 bits (83), Expect = 0.007
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 10/157 (6%)
Query: 47 IRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMS 106
+R K+ +V SV + G + IW+ + + + V S
Sbjct: 3 LRLDIKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRS 62
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDT--HIL 164
F P +V G D VY+ N D V+ + ++ C + T ++L
Sbjct: 63 AKFIPRKQWVVAGADDMYIRVYNYNTMD------KVKVFEAHSDYI-RCVAVHPTLPYVL 115
Query: 165 TGSGDMKICVWDLEAGKREME-FDAHAGDVVSISLSP 200
+ S DM I +WD E G + F+ H+ V+ + +P
Sbjct: 116 SSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Score = 37.1 bits (82), Expect = 0.009
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Query: 54 TLKGHLNKVNSVHY--SGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
TL H VN V Y GD + +TGS D +WD + + VQ + + V +V F P
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCR 156
+ G D ++ E G++ S R
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSR 284
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
+TL GH + V++V + + +TGS DG + IW
Sbjct: 223 QTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 39.9 bits (89), Expect = 0.001
Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
T +GH V S ++ + S D +WD +G+ + + V + AF+
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHI-VRACAFSQDT 114
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTHILTGSGDM-K 171
++ GG + + V+D+N DA E+ G + + +L D IL+ D+
Sbjct: 115 KYLITGGFEKILRVFDLNRLDAPPT-----EIDKSPGSIRTLTWLHGDQTILSSCTDIGG 169
Query: 172 ICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ +WD+ +GK + + V S +S D
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQD 198
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQI 96
KGH V+ V ++ +GS DG + IW T N +I
Sbjct: 267 KGHHGPVHCVRFAPTGESYASGSEDGTIRIWQTGPVNPEEI 307
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
T +GH V S ++ + S D IW+ +G+++ + V + AF+
Sbjct: 51 TFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFEHKHI-VRACAFSEDT 109
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTHIL---TGSGD 169
+ + GGM+ + ++D+N DA +E+ G + + +L D IL T +GD
Sbjct: 110 HRLLTGGMEKILRIFDLNRPDAP-----PKEVGNSPGSIRTVEWLHSDNTILSSCTDTGD 164
Query: 170 MKICVWDLEAGK 181
+++ WD+ + K
Sbjct: 165 IRL--WDIRSDK 174
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGN 92
KGH V+ V Y+ +GS DG + IW S N
Sbjct: 262 KGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVN 298
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 9/134 (6%)
Query: 57 GHLNKVNSVHY--SGDSRHCVTGSLDGKLIIWDTWSGNK--VQIIPLRSAWVMSVAFAP- 111
GH + V V + S C G D L++WD +G +++ A + V + P
Sbjct: 279 GHKDTVEDVAFCPSSAQEFCSVGD-DSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPH 337
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSG--D 169
N + G DN V+D N + G V + G+ + ++ D + GS D
Sbjct: 338 DNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAED 397
Query: 170 MKICVWDLE-AGKR 182
+ +WD + GK+
Sbjct: 398 GLLNIWDCDRVGKK 411
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 39.5 bits (88), Expect = 0.002
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 58 HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQII------------PLR----- 100
H V SV S D + S DG ++ WD SG + I LR
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNK 219
Query: 101 --SAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSS-CRF 157
S +++A + G ++A GG+D ++DV R+ V+ G+ +S C
Sbjct: 220 NHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTRE------HVQAFPGHRNTVSCLCFR 273
Query: 158 LDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSI 196
+ + +GS D + VW++E E H G++++I
Sbjct: 274 YGTSELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAI 312
Score = 35.9 bits (79), Expect = 0.020
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNF 115
K H + ++ S D R+ TG +D + IWD + VQ P V + F +
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSE 278
Query: 116 VACGGMDNMCTVYDVNNR 133
+ G D V++V ++
Sbjct: 279 LYSGSFDRTVKVWNVEDK 296
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIW--DTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACG 119
VN+V S S +G+ +G + +W +T + + +PL + +V S+AFA SG F+ G
Sbjct: 418 VNAVATSRGSDLAASGAGNGFVRLWAVETNAIRPLYELPL-TGFVNSLAFAKSGKFLIAG 476
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 54 TLKGHLNKVNSVHY--SGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
TL HL VN V Y GD + +TGS D +WD + + VQ + + V +V+F P
Sbjct: 180 TLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHP 239
Query: 112 SGNFVACGGMDNMCTVY 128
+ G D ++
Sbjct: 240 ELPIIITGSEDGTVRIW 256
Score = 38.7 bits (86), Expect = 0.003
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 5/151 (3%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK-VQIIPLRSAWVMSVAFAP 111
K + H + + V + ++ S D + +WD G QI S +VM V F P
Sbjct: 93 KVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNP 152
Query: 112 SG-NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDM 170
N A +D ++++ + D + + + D +++TGS D
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGG---DKPYLITGSDDH 209
Query: 171 KICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
VWD + + H +V ++S P+
Sbjct: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE 240
Score = 31.1 bits (67), Expect = 0.57
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
+TL+GH + V++V + + +TGS DG + IW
Sbjct: 223 QTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 39.1 bits (87), Expect = 0.002
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSG-NKVQIIPLRSAWVMSVAFAPS 112
+L GH V+SV + + + S D + WD +G + + + ++ + V S
Sbjct: 267 SLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GES 324
Query: 113 GNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDT--HILTGSGDM 170
+A GG D + V+D G + V + + + ++S+C++ + H+L+ S D
Sbjct: 325 SALIAAGGSDPILRVWDPRK---PGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDG 381
Query: 171 KICVWDL 177
KI +WDL
Sbjct: 382 KIMLWDL 388
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 58 HLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFV 116
H N V V ++ D + ++GS+DGK+ IWD V +R V +V + P
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDI-VTAVCYRPDAKGA 419
Query: 117 ACGGMDNMCTVYDV 130
G M C Y +
Sbjct: 420 VIGSMTGNCRFYHI 433
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 58 HLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFV 116
H N V V ++ D + ++GS+DGK+ IWD V +R V +V + P
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDI-VTAVCYRPDAKGA 419
Query: 117 ACGGMDNMCTVYDV 130
G M C Y +
Sbjct: 420 VIGSMTGNCRFYHI 433
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSG---NKVQIIPLRSAWVMSVAFAPSG 113
G L++ N V +S D R + ++DG + + D++ G + + P+ + AF+P G
Sbjct: 203 GDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEG 262
Query: 114 NFVACGGMDNMCTVYDVNN 132
FV G D + V +
Sbjct: 263 MFVVSGSGDGSTHAWGVRS 281
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD 87
KGH ++V S+ ++GSLD +++WD
Sbjct: 117 KGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 148
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTG 166
V F+ G + MD V D + R + V+ +AG E L + + +++G
Sbjct: 211 VKFSNDGRLMLLTTMDGFIHVLD-SFRGTLLSTFSVKPVAG-ESTLDAAFSPEGMFVVSG 268
Query: 167 SGDMKICVWDLEAGKR 182
SGD W + +GK+
Sbjct: 269 SGDGSTHAWGVRSGKQ 284
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSG---NKVQIIPLRSAWVMSVAFAPSG 113
G L++ N V +S D R + ++DG + + D++ G + + P+ + AF+P G
Sbjct: 200 GDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEG 259
Query: 114 NFVACGGMDNMCTVYDVNN 132
FV G D + V +
Sbjct: 260 MFVVSGSGDGSTHAWGVRS 278
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD 87
KGH ++V S+ ++GSLD +++WD
Sbjct: 114 KGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 145
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTG 166
V F+ G + MD V D + R + V+ +AG E L + + +++G
Sbjct: 208 VKFSNDGRLMLLTTMDGFIHVLD-SFRGTLLSTFSVKPVAG-ESTLDAAFSPEGMFVVSG 265
Query: 167 SGDMKICVWDLEAGKR 182
SGD W + +GK+
Sbjct: 266 SGDGSTHAWGVRSGKQ 281
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF-LDDTH 162
+ S+AF+ G ++A G D ++D + + K+V + Y G L C + +D +
Sbjct: 306 INSIAFSNDGAYLATVGRDGYLRIFDFSTQ------KLVCGVKSYYGALLCCAWSMDGKY 359
Query: 163 ILTGSGDMKICVWDLEAGK 181
+LTG D + VW +E K
Sbjct: 360 LLTGGEDDLVQVWSMEDRK 378
Score = 33.9 bits (74), Expect = 0.081
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGM 121
+NS+ +S D + T DG L I+D + V + ++ A++ G ++ GG
Sbjct: 306 INSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGE 365
Query: 122 DNMCTVYDVNNR 133
D++ V+ + +R
Sbjct: 366 DDLVQVWSMEDR 377
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 70 DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVY 128
D + ++GS+DGK+ IWD V +R V ++ + P G G M C Y
Sbjct: 416 DDNYFISGSIDGKVRIWDVSQFRVVDYTDIRQI-VTALCYRPDGKGAVVGSMTGECRFY 473
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 37.9 bits (84), Expect = 0.005
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 34/191 (17%)
Query: 35 AEKCSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGN-- 92
A + DL K R + K H + V V S D + S DG ++ WD SG
Sbjct: 126 ALRVQDLQSSDKFRVIVK-----HQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKSD 180
Query: 93 ----------KVQIIPLRSAWV-------MSVAFAPSGNFVACGGMDNMCTVYDVNNRDA 135
K + + +W +++A + G ++A GG+D ++D+ R+
Sbjct: 181 EYKWPSDEVLKSHGLKFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREH 240
Query: 136 TGAAKM----VRE-----LAGYEGFLSSCRFLDDT-HILTGSGDMKICVWDLEAGKREME 185
K+ V++ G+ G +SS F + T + +GS D + +W+ E
Sbjct: 241 VQVNKLKNNQVKDSVHCAFTGHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIES 300
Query: 186 FDAHAGDVVSI 196
H +++SI
Sbjct: 301 CFGHQSELLSI 311
Score = 30.7 bits (66), Expect = 0.75
Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFV 116
GH V+S+ + + +GS DG L IW+ ++ + ++S+ A V
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSID-ALGRERV 319
Query: 117 ACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVWD 176
G D +Y V + R E C F++ L+GS + I +W
Sbjct: 320 LSVGRDRTMQLYKVGIVVPESTRLIYR---ASESNFECCCFVNSDEFLSGSDNGSIALWS 376
Query: 177 L 177
+
Sbjct: 377 I 377
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRS----AWVMSV 107
K T KGH + +++V + +TGS DG IWD +G V++I + V S+
Sbjct: 194 KMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSM 253
Query: 108 AFAPSGNFVACGGMDNM 124
A S +++ CG N+
Sbjct: 254 ALDGSESWLVCGQGKNL 270
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 163 ILTGSGDMKICVWDLEAGKREMEFDAHA 190
+ T +GD WD+E+GK +M F H+
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHS 201
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 37.9 bits (84), Expect = 0.005
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 8/142 (5%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGM 121
VN S D + + + ++ D +G + + + + A+ P G + G
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQ 337
Query: 122 DNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMK-ICVWDLEAG 180
D C V+D+ N +K V L G G + S R+ D + + + V+D+ G
Sbjct: 338 DKTCRVWDIRN-----LSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNG 392
Query: 181 -KREMEFDAHAGDVVSISLSPD 201
+ E E D G++ IS SPD
Sbjct: 393 YETEQEID-FFGEISGISFSPD 413
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 51 TKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK-VQIIPLRSAWVMSVAF 109
T TL GHL+ + + D TG+ D +WD + +K V ++ + S+ +
Sbjct: 309 TLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIRY 368
Query: 110 APSGNFVACGGMDNMCTVYDVNN 132
G ++A + VYDV+N
Sbjct: 369 TSDGKYMAMAEPADFVHVYDVSN 391
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 37.9 bits (84), Expect = 0.005
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
T +GH V S ++ + S D +WD +G+ + + V + AF+
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHI-VRACAFSEDT 114
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTHILTGSGDM-K 171
+ GG + + V+D+N DA E+ G + + +L D IL+ D+
Sbjct: 115 KSLLTGGFEKILRVFDMNRLDAPPT-----EVDKSPGSIRTLTWLHSDQTILSSCTDIGG 169
Query: 172 ICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ +WD+ +GK + + V S +S D
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQD 198
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGN 92
KGH V+ V ++ +GS DG + IW T N
Sbjct: 267 KGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPAN 303
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 37.9 bits (84), Expect = 0.005
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
T +GH V S ++ + S D +WD +G+ + + V + AF+
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHI-VRACAFSEDT 114
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTHILTGSGDM-K 171
+ GG + + V+D+N DA E+ G + + +L D IL+ D+
Sbjct: 115 KSLLTGGFEKILRVFDMNRLDAPPT-----EVDKSPGSIRTLTWLHSDQTILSSCTDIGG 169
Query: 172 ICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ +WD+ +GK + + V S +S D
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQD 198
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGN 92
KGH V+ V ++ +GS DG + IW T N
Sbjct: 267 KGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPAN 303
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 37.9 bits (84), Expect = 0.005
Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 5/151 (3%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK-VQIIPLRSAWVMSVAFAP 111
K + H + + V + ++ S D + +WD G QI S +VM V F P
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNP 152
Query: 112 SG-NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDM 170
N A +D ++++ + D ++ + + D +++TGS D
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGG---DKPYLITGSDDH 209
Query: 171 KICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
VWD + + H +V ++ P+
Sbjct: 210 TAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
Score = 37.1 bits (82), Expect = 0.009
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Query: 54 TLKGHLNKVNSVHY--SGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
TL H VN V Y GD + +TGS D +WD + + VQ + + V +V F P
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCR 156
+ G D ++ E G++ S R
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSR 284
Score = 30.3 bits (65), Expect = 0.99
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
+TL+GH + V++V + + +TGS DG + IW
Sbjct: 223 QTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF-LDDTH 162
++ +P+ ++A D +++V+ K+ + L G++ ++ C F +D
Sbjct: 214 ILKCLLSPANKYLATASSDKTVKIWNVDG------FKLEKVLTGHQRWVWDCVFSVDGEF 267
Query: 163 ILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISL 198
++T S DM +W + AGK + H V +L
Sbjct: 268 LVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCAL 303
Score = 37.1 bits (82), Expect = 0.009
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 14/155 (9%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
T H N V +V + D++ +GS DG + IWD + + +A V +V P+
Sbjct: 73 TYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAA-VNTVVLHPNQ 131
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKIC 173
+ G + V+D+ R + + ++V E+ + + S + D ++ + + C
Sbjct: 132 TELISGDQNGNIRVWDL--RANSCSCELVPEV---DTAVRSLTVMWDGTMVVAANNRGTC 186
Query: 174 -VWDLEAGKREM-EFD------AHAGDVVSISLSP 200
VW L GK+ M EF+ AH G ++ LSP
Sbjct: 187 YVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSP 221
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 49 FVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQI 96
F +K L GH V +S D VT S D +W +G +V++
Sbjct: 243 FKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKV 290
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 37.5 bits (83), Expect = 0.007
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGM 121
VN S D + + + +I D +G ++ + + + A+ P G + G
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQ 339
Query: 122 DNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMK-ICVWDLEAG 180
D C V+D+ N ++ V L G G + S R+ D + + + V+D+ G
Sbjct: 340 DKTCRVWDIRN-----LSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNG 394
Query: 181 -KREMEFDAHAGDVVSISLSPD 201
+ E E D G++ IS SPD
Sbjct: 395 YETEQEID-FFGEISGISFSPD 415
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 51 TKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWS-GNKVQIIPLRSAWVMSVAF 109
T +TL GHL+ + + D TG+ D +WD + V ++ + S+ +
Sbjct: 311 TLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRY 370
Query: 110 APSGNFVACGGMDNMCTVYDVNN 132
G ++A + VYDV+N
Sbjct: 371 TSDGKYMAMAEPADFVHVYDVSN 393
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/106 (18%), Positives = 49/106 (46%)
Query: 95 QIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSS 154
++ P + + S++F+P + + DN ++++ A+ A+ ++ + L S
Sbjct: 19 EVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCS 78
Query: 155 CRFLDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
D T + +G D + +W L +G + + H G + +++ P
Sbjct: 79 AWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIP 124
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 37.1 bits (82), Expect = 0.009
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 55 LKGHLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
L H + V V ++ D + ++GSLD K+ IW+ + V+ L+ V +V + P G
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQVVEWNDLKE-MVTAVCYTPDG 613
Query: 114 NFVACGGMDNMCTVYDVNN--RDATGAAKMVRELAGYEGFLSSCRF--LDDTHILTGSGD 169
G ++ C +Y + + T + + +++ +F ++ + +L S D
Sbjct: 614 QAAFVGSINGHCRLYSAEDCKLEQTNQIDLQNKKKAQAKKITAFQFSPINPSEVLVTSAD 673
Query: 170 MKICVWD 176
+I V D
Sbjct: 674 SRIRVLD 680
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/60 (23%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 144 ELAGYEGFLSSCRF--LDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+L + +++ +F LD+ + ++GS D KI +W++ + ++ +E++ V ++ +PD
Sbjct: 554 KLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNI-SNRQVVEWNDLKEMVTAVCYTPD 612
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 37.1 bits (82), Expect = 0.009
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 39 SDLGDVPKIRFVTKKTLKGHLNKVNSVHYSGD-SRHCVT----GSLDGKLIIWDTWSGNK 93
SD + K+ VT H + +S D S C T GS D + +W+ N
Sbjct: 772 SDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNC 831
Query: 94 VQIIPLRSAWVMSVAFAP-SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFL 152
+ I A V V F+P S + +A G D YD+ N L+G+ +
Sbjct: 832 LGTIR-NIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCI-----LSGHNKAV 885
Query: 153 SSCRFLDDTHILTGSGDMKICVWDLE 178
S +FLD+ ++T S D + +WDL+
Sbjct: 886 SYAKFLDNETLVTASTDNTLKLWDLK 911
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 37.1 bits (82), Expect = 0.009
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 51 TKKTLK--GHLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSV 107
TK LK H + V + +S D + ++GSLD K+ IW + V+ L V +
Sbjct: 536 TKTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQDRHVVEWSDLHE-MVTAA 594
Query: 108 AFAPSGNFVACGGMDNMCTVYDVNN 132
+ P G G +C YD +
Sbjct: 595 CYTPDGQGALIGSHKGICRAYDTED 619
Score = 30.3 bits (65), Expect = 0.99
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 138 AAKMVRELAGYEGFLSSCRFLDDTHIL-TGSGDMKICVWDLE 178
A M +E+ +EG + + +F D H L +G D I VW+++
Sbjct: 393 ALHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQ 434
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 36.7 bits (81), Expect = 0.011
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF---APSGNFVAC 118
VN +S D R L ++++D ++G K + LR + ++ + AP+G ++A
Sbjct: 198 VNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEK--LFALRGDHLEAICYLTWAPNGKYIAT 255
Query: 119 GGMDNMCTVYDVNNR 133
G+D ++DV+ +
Sbjct: 256 SGLDKQVLLWDVDKK 270
Score = 33.9 bits (74), Expect = 0.081
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGN 114
L+ H + V S+ S DS +GS+D + ++ SG I + + +AF SG+
Sbjct: 58 LRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGS 117
Query: 115 FVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDM-KIC 173
+A G D + +N D + +VR L G++G ++ F + +L +
Sbjct: 118 LLAAAGDDEGIKL--INTFDGS----IVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVL 171
Query: 174 VWDLEAG 180
W+L+ G
Sbjct: 172 CWELQNG 178
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 36.7 bits (81), Expect = 0.011
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 11/153 (7%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQII----PLRSAWVM---S 106
T +GH V S DS +TGS D +WD SG ++ P RS
Sbjct: 74 TYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDH 133
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF--LDDTHIL 164
+A + +FV ++ + + + D G + +V + + ++ + L+ T I+
Sbjct: 134 LAVITTDHFVGTSSAIHVKRIAE-DPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQT-IV 191
Query: 165 TGSGDMKICVWDLEAGKREMEFDAHAGDVVSIS 197
+G D I +WD E GK + D G +I+
Sbjct: 192 SGGEDAAIRIWDAETGKLLKQSDEEVGHKEAIT 224
Score = 36.7 bits (81), Expect = 0.011
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 109 FAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSG 168
+ P + GG D ++D + E+ E S C+ DD+H LTGS
Sbjct: 183 WGPLNQTIVSGGEDAAIRIWDAETGKLLKQSD--EEVGHKEAITSLCKAADDSHFLTGSH 240
Query: 169 DMKICVWDL 177
D +WD+
Sbjct: 241 DKTAKLWDM 249
Score = 32.3 bits (70), Expect = 0.25
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFV 116
GH + S+ + D H +TGS D +WD + ++ V +VA +P N V
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTY-TTVVPVNAVAMSPLLNHV 276
Query: 117 ACGGMDNMCTVYDVNNRDATGAAK 140
GG + V ++R AK
Sbjct: 277 VLGGGQDASAVTTTDHRAGKFEAK 300
Score = 31.1 bits (67), Expect = 0.57
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTHILTGSGDM 170
+G+ + D+ TV+ +N + G + G+ G + C D + ++TGS D
Sbjct: 48 NGDLLFSCAKDHTPTVWFADNGERLGTYR------GHSGAVWCCDISRDSSRLITGSADQ 101
Query: 171 KICVWDLEAGKREMEF 186
+WD+++GK F
Sbjct: 102 TAKLWDVKSGKELFTF 117
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 40 DLGD-VPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
+LGD VP+ + + K LK H V ++H + D + ++G G+L+ W
Sbjct: 3522 NLGDQVPEYKLILHKVLKFHKQPVTALHLTSDLKQLLSGDSAGQLLSW 3569
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 36.3 bits (80), Expect = 0.015
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 137 GAAKMVRELAGY--EGFLSSCRFLDDTHILTGSGDMKICVWDLEAGKREMEFDA 188
GA +L G+ EG+ S H+L+GS D +IC+WD+ A + DA
Sbjct: 166 GACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDA 219
Score = 32.3 bits (70), Expect = 0.25
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 55 LKGHLNKVNSVHYSGDSR-HCVTGSLDGKLIIWD------TWSGNKVQIIPLRSAWVMSV 107
L+GH ++ + +S + H ++GS D ++ +WD S + QI V V
Sbjct: 174 LRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDV 233
Query: 108 AFAPSGNFV-ACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF--LDDTHIL 164
A+ ++ G D ++D+ + A+K V+ + + ++ F ++ +
Sbjct: 234 AWHLRHEYLFGSVGDDQYLLIWDLR---SPSASKPVQSVVAHSMEVNCLAFNPFNEWVVA 290
Query: 165 TGSGDMKICVWDLEAGKREME-FDAHAGDVVSISLSPDYHT 204
TGS D + ++DL + FD+H +V + +P T
Sbjct: 291 TGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNET 331
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 54 TLKGHLNK--VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
+L GH V VH + R ++ DGK I+WD W G +QI + ++ F+P
Sbjct: 581 SLTGHTASTYVMDVH-PFNPRIAMSAGYDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSP 639
Query: 112 SGNFV 116
G +
Sbjct: 640 DGTSI 644
Score = 31.1 bits (67), Expect = 0.57
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDT-HILTGSGDM 170
SG +V G D + V+ ++ A + G+EG ++ + I + S D
Sbjct: 256 SGRYVITGSDDRLVKVWSMDT------AYCLASCRGHEGDITDLAVSSNNIFIASASNDC 309
Query: 171 KICVWDLEAGKREMEFDAHAGDVVSISLSP 200
I VW L G H G V +I+ SP
Sbjct: 310 VIRVWRLPDGLPVSVLRGHTGAVTAIAFSP 339
Score = 30.7 bits (66), Expect = 0.75
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 142 VRELAGYEGFLSSCRFLDDT--HILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLS 199
++ L G+ + C LD + +++TGS D + VW ++ H GD+ +++S
Sbjct: 238 IKRLRGHRNAVY-CAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVS 296
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIP--LRSAWVMSV-AFAPSGNFVAC 118
VN + +S D+R + +D ++ +W+ G+ V + S +VM V F P
Sbjct: 547 VNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNP--RIAMS 604
Query: 119 GGMDNMCTVYDV 130
G D V+D+
Sbjct: 605 AGYDGKTIVWDI 616
Score = 27.1 bits (57), Expect = 9.2
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
K L+GH N V R+ +TGS D + +W + + + +A + +
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298
Query: 113 GNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL----DDTHILTGSG 168
F+A D + V+ + + V L G+ G +++ F +L+ S
Sbjct: 299 NIFIASASNDCVIRVWRLPD------GLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSD 352
Query: 169 DMKICVWD 176
D +WD
Sbjct: 353 DGTCRIWD 360
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 36.3 bits (80), Expect = 0.015
Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 8/154 (5%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGM 121
+NS+ +S D H T DG L I+D + V ++ +++ G ++ GG
Sbjct: 306 INSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGE 365
Query: 122 DNMCTVYDVNNRDAT----GAAKMVRELAGYEGFLSSCRFLDDTHILTGSG----DMKIC 173
D++ V+ + +R G V +A + S H++ G D ++
Sbjct: 366 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWSSPNSDGSGEHVMYRFGSVGQDTQLL 425
Query: 174 VWDLEAGKREMEFDAHAGDVVSISLSPDYHTDKV 207
+WDLE + + G + S H D V
Sbjct: 426 LWDLEMDEIVVPLRRAPGGSPTYSTGSSAHWDNV 459
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 36.3 bits (80), Expect = 0.015
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 101 SAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD 160
SA V SV FA +G + G D + ++DVN + ++ G + +D
Sbjct: 479 SAAVTSVKFACNGRKMLTSGADRL-QMFDVNRKASSVRLSPSHTQTLSHGTIYDVA-VDP 536
Query: 161 TH--ILTGSGDMKICVWDLEAGK--REMEFDAHAGDVVSISLSP 200
T ++T D KI ++D+E+GK R + D GD V + L P
Sbjct: 537 TSGLVVTVGQDKKINIFDIESGKLVRSFKQDRDHGDPVKVILDP 580
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 109 FAPSGNFVACGGMDNMCTVYDVNNRDATGAA-KMVRELAGYEGFLSS-CRFLDDTHILTG 166
+ P + GG D + ++D TG K E G++ ++S C+ DD+H LTG
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAE----TGKLLKQSDEEVGHKKDITSLCKAADDSHFLTG 211
Query: 167 SGDMKICVWDL 177
S D +WD+
Sbjct: 212 SLDKTAKLWDM 222
Score = 32.7 bits (71), Expect = 0.19
Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 18/162 (11%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
T +GH V S DS +TGS D +WD SG ++ +A SV FA
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKF-NAPTRSVDFAVGD 105
Query: 114 NFVACGG---MDNMCTVY------DVNNRDATGAAKMVRELAGYEGFLSSCRF--LDDTH 162
+D ++ D +DA +V + ++ + L+ T
Sbjct: 106 RLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESV--LVLHCPDGKKRINRAVWGPLNQT- 162
Query: 163 ILTGSGDMKICVWDLEAGKREMEFD---AHAGDVVSISLSPD 201
I++G D I +WD E GK + D H D+ S+ + D
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAAD 204
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD 87
GH + S+ + D H +TGSLD +WD
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 109 FAPSGNFVACGGMDNMCTVYDVNNRDATGAA-KMVRELAGYEGFLSS-CRFLDDTHILTG 166
+ P + GG D + ++D TG K E G++ ++S C+ DD+H LTG
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAE----TGKLLKQSDEEVGHKKDITSLCKAADDSHFLTG 211
Query: 167 SGDMKICVWDL 177
S D +WD+
Sbjct: 212 SLDKTAKLWDM 222
Score = 33.5 bits (73), Expect = 0.11
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD----TWSGNKVQIIPLRSAWVMSVAFAPS 112
GH + S+ + D H +TGSLD +WD T ++P V +V+ +P
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVP-----VNAVSLSPL 245
Query: 113 GNFVACGGMDNMCTVYDVNNRDATGAAK 140
N V GG + V ++R AK
Sbjct: 246 LNHVVLGGGQDASAVTTTDHRAGKFEAK 273
Score = 32.7 bits (71), Expect = 0.19
Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 18/162 (11%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
T +GH V S DS +TGS D +WD SG ++ +A SV FA
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKF-NAPTRSVDFAVGD 105
Query: 114 NFVACGG---MDNMCTVY------DVNNRDATGAAKMVRELAGYEGFLSSCRF--LDDTH 162
+D ++ D +DA +V + ++ + L+ T
Sbjct: 106 RLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESV--LVLHCPDGKKRINRAVWGPLNQT- 162
Query: 163 ILTGSGDMKICVWDLEAGKREMEFD---AHAGDVVSISLSPD 201
I++G D I +WD E GK + D H D+ S+ + D
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAAD 204
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 109 FAPSGNFVACGGMDNMCTVYDVNNRDATGAA-KMVRELAGYEGFLSS-CRFLDDTHILTG 166
+ P + GG D + ++D TG K E G++ ++S C+ DD+H LTG
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAE----TGKLLKQSDEEVGHKKDITSLCKAADDSHFLTG 211
Query: 167 SGDMKICVWDL 177
S D +WD+
Sbjct: 212 SLDKTAKLWDM 222
Score = 33.5 bits (73), Expect = 0.11
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD----TWSGNKVQIIPLRSAWVMSVAFAPS 112
GH + S+ + D H +TGSLD +WD T ++P V +V+ +P
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVP-----VNAVSLSPL 245
Query: 113 GNFVACGGMDNMCTVYDVNNRDATGAAK 140
N V GG + V ++R AK
Sbjct: 246 LNHVVLGGGQDASAVTTTDHRAGKFEAK 273
Score = 32.7 bits (71), Expect = 0.19
Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 18/162 (11%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSG 113
T +GH V S DS +TGS D +WD SG ++ +A SV FA
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKF-NAPTRSVDFAVGD 105
Query: 114 NFVACGG---MDNMCTVY------DVNNRDATGAAKMVRELAGYEGFLSSCRF--LDDTH 162
+D ++ D +DA +V + ++ + L+ T
Sbjct: 106 RLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESV--LVLHCPDGKKRINRAVWGPLNQT- 162
Query: 163 ILTGSGDMKICVWDLEAGKREMEFD---AHAGDVVSISLSPD 201
I++G D I +WD E GK + D H D+ S+ + D
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAAD 204
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 35.9 bits (79), Expect = 0.020
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 53 KTLKG-HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL-RSAWVMSVAFA 110
+TL+G H ++V S+ + D+ TG +DGK++ D + + L + V + ++
Sbjct: 204 RTLRGGHESRVGSLAW--DNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWS 261
Query: 111 PSGNFVACGGMDNMCTVYD---VNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGS 167
SGN A GG DN+ ++D +++ E L+ C F + + TG
Sbjct: 262 ESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPF-QASLLATGG 320
Query: 168 --GDMKICVWDLEAG 180
GD KI W+ G
Sbjct: 321 GVGDGKIKFWNTHTG 335
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 35.9 bits (79), Expect = 0.020
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 10/128 (7%)
Query: 58 HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVA 117
H VN+V S + +G DG + D SGN ++ + V S+ +P G +
Sbjct: 115 HPGGVNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKILV 174
Query: 118 CGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD-THILTGS-GDMKICVW 175
+ N D K +++ G+ G + F +D ++L+ + G+ I VW
Sbjct: 175 TASTQ----LKTFNCSD----LKKIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYIAVW 226
Query: 176 DLEAGKRE 183
+ K++
Sbjct: 227 KTDGAKKQ 234
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 35.9 bits (79), Expect = 0.020
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 58 HLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFV 116
H + V + ++ D R+ ++GSLD K+ +W V L V S + P G V
Sbjct: 552 HSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLHE-MVTSACYTPDGQGV 610
Query: 117 ACGGMDNMCTVYDVNN 132
G C +Y ++
Sbjct: 611 LVGSYKGSCRMYSASD 626
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 35.9 bits (79), Expect = 0.020
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 58 HLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFV 116
H N V V ++ + + +GS+DGK IW V +R + + ++++ P+GN
Sbjct: 311 HNNYVTCVEFNPVNKNNFASGSIDGKARIWGLSEERVVAWTDVRDS-ISAISYQPNGNGF 369
Query: 117 ACGGMDNMCTVYDVNNRD 134
G + C Y + + D
Sbjct: 370 VVGCITGNCRFYQILDND 387
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 21 KVKADQEKLADAKLAEKCSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLD 80
K K+ +E ++ K+ ++ V K + GH K+ ++ +S D ++ TG D
Sbjct: 162 KYKSSEETMSKVKVKTNKKSHVELSAAYMVQK--INGHKGKIWTLKFSPDGKYLATGGED 219
Query: 81 GKLIIW 86
G + IW
Sbjct: 220 GVVKIW 225
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 35.5 bits (78), Expect = 0.026
Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Query: 55 LKGHLNKVNSVHYSGDSRHCV-TGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSV-AFAPS 112
L H + +N++ SG + + +G DG +++W+ G + ++ + SV A
Sbjct: 255 LSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVV 314
Query: 113 GNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYE---GFLSSCRFLDDT--HILTGS 167
+ + G D ++ + +D + A + L + G R D+ HI +G
Sbjct: 315 SDILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGG 374
Query: 168 GDMKICVWDL 177
D ++ VW +
Sbjct: 375 LDSQVKVWQV 384
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 35.5 bits (78), Expect = 0.026
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF-----L 158
+ S+ F+P G ++ D V + GA ++ G+ F++ F L
Sbjct: 158 ITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPEL 217
Query: 159 DDTHILTGSGDMKICVWDLEAG 180
++++GSGD + +WD+ +G
Sbjct: 218 TQGYLMSGSGDSTVRLWDITSG 239
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 35.1 bits (77), Expect = 0.035
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 41 LGDVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD 87
L DV ++ V + +GH +++ + +S D + ++ S+DG L IWD
Sbjct: 541 LYDVVTLKMV--REFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWD 585
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 35.1 bits (77), Expect = 0.035
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 132 NRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVWDLEAGKREMEFDAHAG 191
+++ T A+ +A Y D+ +LT SGD I VWD+E K H G
Sbjct: 112 HQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTG 171
Query: 192 DVVSISLSP 200
V S+ P
Sbjct: 172 TVKSMCSHP 180
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 35.1 bits (77), Expect = 0.035
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 85 IWDTWSGNKVQIIP--LRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMV 142
I D G+ ++I L + VAF G+ +A G D C ++D R G AK +
Sbjct: 5 IIDPLQGDFPEVIEEYLEHGVIKCVAFNHRGSLLAAGCADGGCVIWDFETR---GIAKEI 61
Query: 143 RELAGYEGFLSSCRFLDDTH-ILTGSGDMKICVWDLEAGKR 182
R+ ++S + H +L + D + +WD+ G++
Sbjct: 62 RD-NDCSAAITSVSWSKYGHRLLVSAADKSLTLWDVSTGEK 101
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 35.1 bits (77), Expect = 0.035
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK---VQIIPLRSAWVMSVAFA 110
TL+GH N+V SV ++ T S D + IW+ GN+ ++ + V V +
Sbjct: 113 TLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWH 172
Query: 111 PSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELA----GYEGFLSSCRF-LDDTHILT 165
P+ + + DN V+ + D G + V+ L G+ + S F ++T
Sbjct: 173 PTMDVLFSCSYDNTIKVW--WSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVT 230
Query: 166 GSGDMKICVWDLEAGKRE 183
S D+ + +W + K +
Sbjct: 231 CSDDLTLKIWGTDIAKMQ 248
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 34.7 bits (76), Expect = 0.046
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 13/146 (8%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQII--PLRSAWVMSVAFAPSGNFVACG 119
+N V YS +T S DG + ++D S V+ I + V S F FV
Sbjct: 177 INQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSS 236
Query: 120 GMDNMCTVYDVNNRDATGAAKMVRELAGYEGF-LSSCRFLDDTH---ILTGSGDMKICVW 175
G D+ ++++ G+ +MV+E G + L S +DT I ++ W
Sbjct: 237 GKDSTVKLWEI------GSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVTW 290
Query: 176 DLEAGKREMEFDA-HAGDVVSISLSP 200
D + ++ + H G I SP
Sbjct: 291 DARTADKVAKWPSNHNGAPRWIEHSP 316
Score = 27.5 bits (58), Expect = 7.0
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHI 163
V S++F PSG F+ G + +YDVN + +G G ++ R+ I
Sbjct: 131 VRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPD--SGVSGAINQVRYSSTGSI 188
Query: 164 -LTGSGDMKICVWD 176
+T S D I ++D
Sbjct: 189 YITASKDGAIRLFD 202
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 34.7 bits (76), Expect = 0.046
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 13/146 (8%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQII--PLRSAWVMSVAFAPSGNFVACG 119
+N V YS +T S DG + ++D S V+ I + V S F FV
Sbjct: 269 INQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSS 328
Query: 120 GMDNMCTVYDVNNRDATGAAKMVRELAGYEGF-LSSCRFLDDTH---ILTGSGDMKICVW 175
G D+ ++++ G+ +MV+E G + L S +DT I ++ W
Sbjct: 329 GKDSTVKLWEI------GSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVTW 382
Query: 176 DLEAGKREMEFDA-HAGDVVSISLSP 200
D + ++ + H G I SP
Sbjct: 383 DARTADKVAKWPSNHNGAPRWIEHSP 408
Score = 27.5 bits (58), Expect = 7.0
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHI 163
V S++F PSG F+ G + +YDVN + +G G ++ R+ I
Sbjct: 223 VRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPD--SGVSGAINQVRYSSTGSI 280
Query: 164 -LTGSGDMKICVWD 176
+T S D I ++D
Sbjct: 281 YITASKDGAIRLFD 294
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 34.3 bits (75), Expect = 0.061
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP- 111
K L GH V +S ++++ + SLD + +W+ G +++I S + F P
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISP-QYCIRFHPV 268
Query: 112 SGNFVACGGMDNMCTVYD 129
+ NF++ G + TV++
Sbjct: 269 NNNFLSAGNANKELTVFN 286
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 33.9 bits (74), Expect = 0.081
Identities = 30/149 (20%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
Query: 58 HLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFV 116
H + V SV ++ + + ++GS+DGK+ IW+ + V L+ + +V + P G
Sbjct: 367 HNSYVTSVQFNPVNENYFMSGSIDGKVRIWNISGCSVVDWADLKDI-ISAVCYRPDGQGG 425
Query: 117 ACGGMDNMCTVYDVNNR--DATGAAKMVRELAGYEGFLSSCRFL--DDTHILTGSGDMKI 172
G ++ C ++++ + + + ++ +FL + T +L S D K+
Sbjct: 426 IIGSLNGSCRFFNMSGEFLELDSQIHLHNKKKSSNKRITGFQFLPQEPTKVLVVSADSKV 485
Query: 173 CVWDLEAGKREMEFDAHAGDVVSISLSPD 201
+ R+ + + S SL+ D
Sbjct: 486 RILQGNNVVRKYKGVCKTRSLTSASLTSD 514
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 33.9 bits (74), Expect = 0.081
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 40 DLGDVPKIRFVTK---KTLK-GHLNKVNSVHY-SGDSRHCVTGSLDGKLIIWDTWSGNKV 94
D GDV I K KTL+ GH + +SV + +TG LD KL++WD G
Sbjct: 125 DSGDVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSKGRSQ 184
Query: 95 QIIPLRS 101
+II S
Sbjct: 185 KIIDFGS 191
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 146 AGYEGFLSSCRFLD--DTHILTGSGDMKICVWDLEAGKREMEFD 187
AG+ SS +F+ ++TG D K+ +WD G+ + D
Sbjct: 145 AGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSKGRSQKIID 188
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 33.9 bits (74), Expect = 0.081
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Query: 28 KLADAKLAEKCSDLGD---VPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLI 84
K + K EKC L P + V L+GH N + + S + S DG L+
Sbjct: 155 KDGNCKKGEKCQFLHSWSCFPGLAMVA--ALEGHKNDIKGIALPQGSDKLFSVSGDGTLL 212
Query: 85 IWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDV-NNRDA--TGAAKM 141
IWD SG V+ I L++ + + G +V G+ N ++V N++D G
Sbjct: 213 IWDCNSGQCVRSINLQAE---AGSLISEGPWVFL-GLPNAVKAFNVQNSKDVHLEGVVGQ 268
Query: 142 VRELAGYEGFL 152
V + G L
Sbjct: 269 VHAMTAANGML 279
Score = 30.3 bits (65), Expect = 0.99
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 140 KMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSI 196
K + L G+ +C + + +GS D I VWDL + M H G V S+
Sbjct: 302 KYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSL 358
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 33.9 bits (74), Expect = 0.081
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH- 162
V VA++P GNF+ ++ +Y + + E+ + G ++ F +
Sbjct: 410 VTRVAWSPDGNFIGVAFTKHLIQLYAFS---GPNDLRQHTEIDAHVGAVNDLAFANPNRQ 466
Query: 163 --ILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSI 196
++T D I VWD+ +G++ F+ H V SI
Sbjct: 467 LCVITCGDDKLIKVWDV-SGRKHFTFEGHDAPVYSI 501
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW--DTWSGNK 93
K LKGH ++ + +S V+ D ++ W DTW K
Sbjct: 897 KSKLKGHQKRITGLAFSTALNILVSSGADAQICFWSIDTWEKRK 940
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 33.9 bits (74), Expect = 0.081
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 101 SAWVMSVAFAPSGN-FVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF-- 157
S + +S A +GN +VA GG+ + V DVN+ + + L G+ ++ R
Sbjct: 85 SFYTVSWACGVNGNPYVAAGGVKGIIRVIDVNSE------TIHKSLVGHGDSVNEIRTQP 138
Query: 158 LDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDYHTDKV 207
L ++T S D + +W++E G + F G + LS D+H +
Sbjct: 139 LKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEV-LSVDFHPSDI 187
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 33.9 bits (74), Expect = 0.081
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 13 KELTDLISKVKADQEKLADAKLAEKCSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSGDSR 72
KE+T L +++A ++ D + ++ ++GD ++ + +K + G LN V+SV +G
Sbjct: 250 KEITGLRQELEAIRKSFLDHENGDEAGEVGDRKRVEQLHRK-MSGSLNSVSSVWENGKHE 308
Query: 73 HCVTG 77
TG
Sbjct: 309 ESSTG 313
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 33.9 bits (74), Expect = 0.081
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 58 HLNKVNSVHYSGDSRHCV-TGSLDGKLIIWDTWS--GNKVQIIPL--RSAWVMSVAFAPS 112
H ++NS+ ++ + H + T S DG +WD S K + + S V S F+PS
Sbjct: 347 HERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPS 406
Query: 113 GNFVACGGMDNMCTVYDVNNRDAT 136
G +A +DN V N + T
Sbjct: 407 GLSLATTSLDNYIGVLSGANFENT 430
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 174 VWDLEAGKREMEFDAHAGDVVSISLSP 200
VWDL AGK ++ H + SI +P
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFNP 358
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 33.9 bits (74), Expect = 0.081
Identities = 22/109 (20%), Positives = 45/109 (41%)
Query: 92 NKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGF 151
N +I P + + S++F+P + + D +++ D + A++ ++ +
Sbjct: 17 NSYEITPPATDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPV 76
Query: 152 LSSCRFLDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
L S D T + TG D + +W L +G + H I+ P
Sbjct: 77 LCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIP 125
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/70 (22%), Positives = 25/70 (35%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
K H V + D TG D + +W SG + + + A +A+ P
Sbjct: 67 KVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPG 126
Query: 113 GNFVACGGMD 122
N + G D
Sbjct: 127 MNLLVTGSWD 136
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.9 bits (74), Expect = 0.081
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDT--WSGNKVQIIPL 99
K LKGH ++ + +S V+ D +L +W+T W + +++PL
Sbjct: 912 KSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQRSKVLPL 961
Score = 30.7 bits (66), Expect = 0.75
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTG 166
+AF P N + GMD+ T+ N R ++ +L G+ ++ F + ++L
Sbjct: 882 LAFHPQDNNIIAIGMDDS-TIQIYNVR----VDEVKSKLKGHSKRITGLAFSNVLNVLVS 936
Query: 167 SG-DMKICVWDLEAGKRE 183
SG D ++CVW+ + +++
Sbjct: 937 SGADAQLCVWNTDGWEKQ 954
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.9 bits (74), Expect = 0.081
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDT--WSGNKVQIIPL 99
K LKGH ++ + +S V+ D +L +W+T W + +++PL
Sbjct: 912 KSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQRSKVLPL 961
Score = 30.7 bits (66), Expect = 0.75
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTG 166
+AF P N + GMD+ T+ N R ++ +L G+ ++ F + ++L
Sbjct: 882 LAFHPQDNNIIAIGMDDS-TIQIYNVR----VDEVKSKLKGHSKRITGLAFSNVLNVLVS 936
Query: 167 SG-DMKICVWDLEAGKRE 183
SG D ++CVW+ + +++
Sbjct: 937 SGADAQLCVWNTDGWEKQ 954
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSV-AFAPS 112
T+ V S++++ D RH G + ++ +WD S + Q+ L+ V + A +
Sbjct: 177 TIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWD--SASNRQLRTLKGGHQSRVGSLAWN 234
Query: 113 GNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTHILTGSGDMK 171
+ + GGMD + + N D + +V G+ + ++ + +G D
Sbjct: 235 NHILTTGGMDGL-----IINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNV 289
Query: 172 ICVWD 176
+ +WD
Sbjct: 290 VHIWD 294
Score = 32.3 bits (70), Expect = 0.25
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 13/165 (7%)
Query: 46 KIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD--TWSGNK----VQIIPL 99
+IR +T +GH +V + +SG + +G D + IWD S N + +
Sbjct: 253 RIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEE 312
Query: 100 RSAWVMSVAFAP-SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL 158
++ V ++A+ P N +A GG T+ N TGA + + S
Sbjct: 313 HTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTH--TGAC--LNSVDTGSQVCSLLWSK 368
Query: 159 DDTHILTGSG--DMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
++ +L+ G ++ +W + + E H V+ ++ SPD
Sbjct: 369 NERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPD 413
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSV-AFAPS 112
T+ V S++++ D RH G + ++ +WD S + Q+ L+ V + A +
Sbjct: 167 TIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWD--SASNRQLRTLKGGHQSRVGSLAWN 224
Query: 113 GNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-DDTHILTGSGDMK 171
+ + GGMD + + N D + +V G+ + ++ + +G D
Sbjct: 225 NHILTTGGMDGL-----IINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNV 279
Query: 172 ICVWD 176
+ +WD
Sbjct: 280 VHIWD 284
Score = 32.3 bits (70), Expect = 0.25
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 13/165 (7%)
Query: 46 KIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD--TWSGNK----VQIIPL 99
+IR +T +GH +V + +SG + +G D + IWD S N + +
Sbjct: 243 RIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEE 302
Query: 100 RSAWVMSVAFAP-SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL 158
++ V ++A+ P N +A GG T+ N TGA + + S
Sbjct: 303 HTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTH--TGAC--LNSVDTGSQVCSLLWSK 358
Query: 159 DDTHILTGSG--DMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
++ +L+ G ++ +W + + E H V+ ++ SPD
Sbjct: 359 NERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPD 403
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 159 DDTHIL-TGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
+ +H+L +GS D I +WDLE+G M H V I LSP
Sbjct: 547 NSSHVLISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILSP 589
Score = 31.1 bits (67), Expect = 0.57
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 50 VTKKTLKGHLNKVNSV---HYSGDSRHC------VTGSLDGKLIIWDTWSGNKVQIIPLR 100
V K+ L GH V + GD+ C ++GS+D + IWD SGN + I+
Sbjct: 519 VYKQRLLGHTGSVLCLAAHRMFGDANGCNSSHVLISGSMDCTIRIWDLESGNVIMIMHHH 578
Query: 101 SAWVMSVAFAPS 112
A V + +P+
Sbjct: 579 VAPVRQIILSPA 590
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 42 GDVPKIRFVTKKTLK---GHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
GD+ T K LK GH V + +SGD V+GS DG + +W
Sbjct: 100 GDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVW 147
Score = 32.3 bits (70), Expect = 0.25
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 5/114 (4%)
Query: 65 VHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNM 124
+ Y G + ++ S D +W G ++ I S + ++A P G G D+
Sbjct: 181 IDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSV-INALALDPGGCVFYAGARDSK 239
Query: 125 CTVYDVNNRDATGAAKM--VRELAGYEGFLSSCRFLDDTHILTGSGDMKICVWD 176
+ +N G + V E L+ C D +++GS D +CVWD
Sbjct: 240 IYIGAINATSEYGTQVLGSVSEKGKAITCLAYCA--DGNLLISGSEDGVVCVWD 291
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 81 GKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAK 140
G + W +W+ + ++ + ++A G ++ GG+ +++V ATG K
Sbjct: 59 GSIFYW-SWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEV----ATG--K 111
Query: 141 MVRELAGYEGFLSSCRFL-DDTHILTGSGDMKICVWDL 177
++++ G+ ++ F DD+ +++GS D I VW L
Sbjct: 112 LLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 33.5 bits (73), Expect = 0.11
Identities = 27/136 (19%), Positives = 60/136 (44%), Gaps = 8/136 (5%)
Query: 50 VTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
+T T +G+ V + V + GK+ +++ + + S+AF
Sbjct: 835 MTNDTREGNKEDVVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAF 894
Query: 110 APS-GNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSG 168
P N +A G D+ +Y+V ++ +L G++ ++ F + ++L SG
Sbjct: 895 HPQDNNIIAIGMDDSSIQIYNVR------VDEVKSKLKGHQKRVTGLAFSNVLNVLVSSG 948
Query: 169 -DMKICVWDLEAGKRE 183
D ++CVW ++ +++
Sbjct: 949 ADSQLCVWSMDGWEKQ 964
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 55 LKGHLNKVNSVHYSGDSRH-CVTGSLDGKLI-IWDTWSGNKVQIIPLRSAWVMSV 107
+ H VN + +S ++ CV + K I +WD +GNK+ A V SV
Sbjct: 460 IDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 33.5 bits (73), Expect = 0.11
Identities = 27/136 (19%), Positives = 60/136 (44%), Gaps = 8/136 (5%)
Query: 50 VTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
+T T +G+ V + V + GK+ +++ + + S+AF
Sbjct: 835 MTNDTREGNKEDVVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAF 894
Query: 110 APS-GNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSG 168
P N +A G D+ +Y+V ++ +L G++ ++ F + ++L SG
Sbjct: 895 HPQDNNIIAIGMDDSSIQIYNVR------VDEVKSKLKGHQKRVTGLAFSNVLNVLVSSG 948
Query: 169 -DMKICVWDLEAGKRE 183
D ++CVW ++ +++
Sbjct: 949 ADSQLCVWSMDGWEKQ 964
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 55 LKGHLNKVNSVHYSGDSRH-CVTGSLDGKLI-IWDTWSGNKVQIIPLRSAWVMSV 107
+ H VN + +S ++ CV + K I +WD +GNK+ A V SV
Sbjct: 460 IDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD 87
K H + + SV +S D R ++ S DG L +WD
Sbjct: 370 KAHTDDITSVKFSSDGRILLSRSFDGSLKVWD 401
Score = 27.1 bits (57), Expect = 9.2
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 17/138 (12%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK-----VQIIPLRSAWVMSVAF 109
LKGH V+S+ ++GS D + ++D N QI P V SV++
Sbjct: 173 LKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMNSRLQSFRQIEPSEGHQVRSVSW 232
Query: 110 AP-SGNFVACGGMDNMCTVYDVNNRDATGAAK---MVRELAGYEGFLSSCRFLDDTH--- 162
+P SG F+ G ++D + K +R+L +G + + H
Sbjct: 233 SPTSGQFLCVTG-SAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHICGLT-CGEWHPRT 290
Query: 163 ---ILTGSGDMKICVWDL 177
+LT S D + +WD+
Sbjct: 291 KETVLTSSEDGSLRIWDV 308
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 33.1 bits (72), Expect = 0.14
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 53 KTLKG-HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL-RSAWVMSVAFA 110
+TL+G H ++V S+ ++ + TG +DGK++ D + + L + V + ++
Sbjct: 170 RTLRGGHESRVGSLAWN--NHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWS 227
Query: 111 PSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL-----DDTHILT 165
SG +A GG DN+ ++D +R + + L +E ++ R L + + T
Sbjct: 228 ESGKKLASGGNDNVVHIWD--HRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLAT 285
Query: 166 GS--GDMKICVWDLEAG 180
G GD KI W+ G
Sbjct: 286 GGGVGDGKIKFWNTHTG 302
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIW--DTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACG 119
+NSVH+ +++ +T LD +L + D K+Q I L + AF P+G+ V
Sbjct: 247 INSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNGSQVIVS 306
Query: 120 GMDNMCTVYDV 130
G +D+
Sbjct: 307 GRRKFFYSFDL 317
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Query: 114 NFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD-THILTGSGDMKI 172
N +A G + + ++ G KM G + S F +D H+L+ GD ++
Sbjct: 346 NTIAFVGNEGYILLVSTKTKELIGTLKM-------NGSVRSLAFSEDGKHLLSSGGDGQV 398
Query: 173 CVWDLEAGK 181
VWDL K
Sbjct: 399 YVWDLRTMK 407
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD 87
TLK + V S+ +S D +H ++ DG++ +WD
Sbjct: 370 TLKMN-GSVRSLAFSEDGKHLLSSGGDGQVYVWD 402
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40
repeats; similar to PC326 protein (GI:200241)
(PIR2:S37694) [Mus musculus]; Human (H326) mRNA, Homo
sapiens, gb:U06631
Length = 496
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 47 IRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGN 92
+R K L+ H VN+V ++ + ++GS D ++++WD GN
Sbjct: 47 LRLEIYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGN 92
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 140 KMVRELAGYEGFLSSCRFLDDTHIL-TGSGDMKICVWDLEAGKREMEF-DAHAGDVVSIS 197
++ ++L ++G +++ F + +L +GS D ++ +WD + G ++ F HA +V
Sbjct: 50 EIYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAK 109
Query: 198 LSP 200
P
Sbjct: 110 FMP 112
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 56 KGHLN--KVNSVHYSGD-SRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPS 112
KGH N V V++ G S + V+GS G++ IW G ++++ V + P
Sbjct: 328 KGHKNCETVKGVNFFGPRSEYVVSGSDCGRIFIWRKKGGELIRVMEADRHVVNCIEPHPH 387
Query: 113 GNFVACGGMDNMCTVY 128
+A G+++ V+
Sbjct: 388 IPVLASSGIESDIKVW 403
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 32.7 bits (71), Expect = 0.19
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 43 DVPKIRFVTKKTLKGHLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRS 101
DV + + VT+ +K H +V S+ S D +GS DG +G + I +
Sbjct: 612 DVARSQLVTE--MKEHKKRVWSIDISSADPTLLASGSDDG--------TGVSIGTIKTK- 660
Query: 102 AWVMSVAF-APSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD 160
A V V F + SG +A G D+ YD+ N + + G+ +S +F+D
Sbjct: 661 ANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIP-----LCTMIGHSKTVSYVKFVDS 715
Query: 161 THILTGSGDMKICVWDL 177
+ +++ S D + +WDL
Sbjct: 716 STLVSSSTDNTLKLWDL 732
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 32.7 bits (71), Expect = 0.19
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNF-VACGG 120
V+SV + D L G + ++D ++ + SA V + + GG
Sbjct: 96 VSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGG 155
Query: 121 MDNMCTVYDVNNRDATGAAKMVRELAGYEGFL--SSCRFLDDTHILTGSGDMKICVWD 176
D + +DV A ++ +L G++ ++ C ++D+ ++TGS D + VWD
Sbjct: 156 DDGVVKYWDV------AGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWD 207
Score = 27.9 bits (59), Expect = 5.3
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 68 SGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTV 127
S +SR V+ +LDG + ++D + KV A +MS+ +P G+ GG + M
Sbjct: 277 SAESR-LVSVALDGYMKVFD-YGRAKVTYSMRFPAPLMSLGLSPDGSTRVIGGSNGMVFA 334
Query: 128 YDVNNRDATGAAK 140
RD G K
Sbjct: 335 GKKKVRDVVGGQK 347
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 32.7 bits (71), Expect = 0.19
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Query: 58 HLNKVNSVHYS-GDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP-SGNF 115
H + SV +S D V+GS D + +W + I A V V F+ S +
Sbjct: 807 HQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTI-WSPANVCCVQFSSYSNHL 865
Query: 116 VACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVW 175
+A G D YD+ LAG+E +S +F+D I++ S D + +W
Sbjct: 866 LAFGSADYKVYCYDLRYVKTPWCT-----LAGHEKAVSYVKFMDSETIVSASTDNSLKLW 920
Query: 176 DL 177
+L
Sbjct: 921 NL 922
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVN--NRDATGAAKMVRELAGYEGFLSSC-RFLDD 160
V S++F P +A G+ ++D N ++ G + E+ C
Sbjct: 719 VCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIK 778
Query: 161 THILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
++ + D + +WD G+ ++ H S+ SP
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSP 818
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 72 RHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVN 131
R ++ DGK IIWD W G +++ + ++ F+ G + D++ +Y +N
Sbjct: 653 RIAMSAGYDGKTIIWDIWEGIPIKVYEIGRFKLVDGKFSQDGTSIVLS--DDVGQIYFLN 710
Score = 31.5 bits (68), Expect = 0.43
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHI 163
V F SG +V G D + ++ + A + G+EG ++ + +
Sbjct: 308 VYCAIFDRSGRYVITGSDDRLVKIWSMET------ALCLASCRGHEGDITDLAVSSNNAL 361
Query: 164 L-TGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSP 200
+ + S D I VW L G H G V +I+ SP
Sbjct: 362 VASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSP 399
Score = 30.3 bits (65), Expect = 0.99
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 142 VRELAGYEGFLSSCRFLDDT--HILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLS 199
+++L G+ + C D + +++TGS D + +W +E H GD+ +++S
Sbjct: 298 IKKLRGHRNAVY-CAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVS 356
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
K L+GH N V + R+ +TGS D + IW
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIW 332
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIP--LRSAWVMSV-AFAPSGNFVAC 118
VN + +S D+R + +D ++ +W+ G+ V + S++V+ V F P
Sbjct: 600 VNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNP--RIAMS 657
Query: 119 GGMDNMCTVYDV 130
G D ++D+
Sbjct: 658 AGYDGKTIIWDI 669
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP 111
KGH V S+ +GS DG + +W+ +G +++ A +M VA+ P
Sbjct: 420 KGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEA-IMCVAWNP 474
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 31.9 bits (69), Expect = 0.32
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 12/114 (10%)
Query: 97 IPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCR 156
+P S +SV ++P + G D + +D AT ++ R AG G SS
Sbjct: 194 LPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWD-----ATSCHEVYRITAGLGGLGSSSE 248
Query: 157 F-------LDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSISLSPDYH 203
L + +++G + WD E G H GDV +++ +P ++
Sbjct: 249 ICVWSLLSLRCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHN 302
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 75 VTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVN 131
V+G G + WD+ G ++ V ++A APS N V G D +Y ++
Sbjct: 263 VSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKLS 319
Score = 27.5 bits (58), Expect = 7.0
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 27 EKLADAKLAEKCSDLGDVPKIRF--VTKKTLKGHLNKVN----SVHYSGDSRHCVTGSLD 80
E+ D LA C D G V R + K T L +V+ SV +S D++ +GS D
Sbjct: 161 EEEIDRILAAACDD-GCVRLYRISNLEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSD 219
Query: 81 GKLIIWDTWSGNKV 94
G + WD S ++V
Sbjct: 220 GLIRCWDATSCHEV 233
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 31.9 bits (69), Expect = 0.32
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 50 VTKKTLKGHLNKVNS-VHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQ--IIPLRSAWVMS 106
V K+ GH ++S + Y D+ +TGS D L +WDT + V +P +
Sbjct: 94 VDKQHENGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAM 153
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH--IL 164
+ A S +A G D + D+ A+GA L+G+ + S + + +
Sbjct: 154 SSMAMSHTLIAAGTEDVQVRLCDI----ASGA--FSHTLSGHRDGVMSVEWSTSSEWVLY 207
Query: 165 TGSGDMKICVWDL 177
TG D I WD+
Sbjct: 208 TGGCDGAIRFWDI 220
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 51 TKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
T L+GH VN+ ++ + + T D ++++W
Sbjct: 391 TTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVW 426
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 31.5 bits (68), Expect = 0.43
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 52 KKTLKGHLN---KVNSVHYSGD-SRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSV 107
K+ GH N + + G + +GS DG+ IW+ +G ++++ + + +
Sbjct: 610 KRRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCI 669
Query: 108 AFAPSGNFVACGGMDNMCTVY 128
P + VA G+DN ++
Sbjct: 670 QCHPFDSVVATSGIDNTIKIW 690
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 143 RELAGYEGFLSSCRFLDDTHIL-TGSGDMKICVWDLEAGKREMEFD-AHAGDVVSISLSP 200
+EL G++G +++ + + +L +GS D++I +W+ + K D H ++ P
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Query: 201 D 201
+
Sbjct: 104 E 104
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 48 RFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL-RSAWVMS 106
R ++ L+GH VN++ ++ + ++GS D ++ IW+ S + I +A +
Sbjct: 39 RLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFC 98
Query: 107 VAFAP--SGNFVACGGMD 122
F P S V G D
Sbjct: 99 TKFVPETSDELVVSGAGD 116
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 31.5 bits (68), Expect = 0.43
Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 13/129 (10%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDT---WSGNK---VQIIPLRSAWVMS 106
++++ H + +N+V D TGS DG L +W G K V ++ + V +
Sbjct: 285 ESIQAHDDAINTVAAGFDDL-LFTGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTA 343
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTG 166
+A + V CG D ++ + G LA C + +L+G
Sbjct: 344 LAVNITAAVVYCGSSDGTVNFWEGQKYLSHGGTLRGHRLAVL------CLAAAGSLVLSG 397
Query: 167 SGDMKICVW 175
D ICVW
Sbjct: 398 GADKNICVW 406
>At1g01770.1 68414.m00096 expressed protein
Length = 632
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 125 CTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSG 168
C + ++ D +GA K V E+AG G S + H TGSG
Sbjct: 102 CIITNMGAIDPSGAQKKVLEVAGELGLTISVAVAHEVHFETGSG 145
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 31.1 bits (67), Expect = 0.57
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Query: 58 HLNKVNSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFV 116
H + V + ++ D + ++GSLD K+ IW V L V + + P G
Sbjct: 507 HSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPDHQVVDWNDLHE-MVTAACYTPDGQGA 565
Query: 117 ACGGMDNMCTVYDVNN 132
G C +Y+ ++
Sbjct: 566 LVGSYKGTCCLYNTHD 581
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 31.1 bits (67), Expect = 0.57
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 53 KTLKG-HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL-RSAWVMSVAFA 110
+TL+G H ++V S+ ++ + TG +DGK++ D + + + + V + ++
Sbjct: 188 RTLRGGHESRVGSLAWN--NHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWS 245
Query: 111 PSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEG---FLSSCRFLDDTHILTGS 167
SG +A GG DN+ ++D + + + + + L+ C F + + TG
Sbjct: 246 ESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPF-QASLLATGG 304
Query: 168 --GDMKICVWDLEAG 180
GD KI W+ G
Sbjct: 305 GVGDGKINFWNTHTG 319
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 77 GSLDGKLIIWDTWSGNKVQIIPLR--SAWVMSVAFAPSGNFVACGGMDNMCTVYDV 130
GS DG +W+ ++ + + LR + V SV++ SG+ +A G D ++++
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEI 121
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 31.1 bits (67), Expect = 0.57
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 42 GDVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK 93
G V K+ K L GH VN+V ++ V+GS D ++++W+ SG++
Sbjct: 40 GRVKKLDLYGK--LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSR 89
Score = 30.3 bits (65), Expect = 0.99
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 144 ELAGYEGFLSSCRFLDDTHIL-TGSGDMKICVWDLEAGKREMEF-DAHAGDVVSISLSP 200
+L G+EG +++ F +L +GS D +I +W+ +G R++ + H +V P
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIP 108
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 31.1 bits (67), Expect = 0.57
Identities = 32/147 (21%), Positives = 64/147 (43%), Gaps = 10/147 (6%)
Query: 57 GHLNKVNSVHYSGDSRHCVTG-SLDGKLIIWDTWSGNKVQI-IPLRSAWVMSVAFAPSGN 114
GH V + +S + S+DG + +WD G + +A V +++ +
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLAS 326
Query: 115 -FVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFL--DDTHILTGSGDMK 171
+A G D ++ D+ R G +V ++ ++S + + + + SGD +
Sbjct: 327 CMLASGSDDGTFSIRDL--RLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQ 384
Query: 172 ICVWDLEAGK---REMEFDAHAGDVVS 195
+ +WDL K E EF+A ++V+
Sbjct: 385 LTIWDLSLEKDEEEEAEFNAQTKELVN 411
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 0.57
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDT--WSGNKVQIIPL 99
K LKGH ++ + +S V+ D +L +W+T W K +++ +
Sbjct: 901 KSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQKSKVLQI 950
Score = 30.7 bits (66), Expect = 0.75
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTG 166
+AF P N + GMD+ T+ N R ++ +L G+ ++ F + ++L
Sbjct: 871 LAFHPQDNNIIAIGMDDS-TIQIYNVR----VDEVKSKLKGHSKRITGLAFSNVLNVLVS 925
Query: 167 SG-DMKICVWDLEAGKRE 183
SG D ++CVW+ + +++
Sbjct: 926 SGADAQLCVWNTDGWEKQ 943
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 0.57
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDT--WSGNKVQIIPL 99
K LKGH ++ + +S V+ D +L +W+T W K +++ +
Sbjct: 901 KSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQKSKVLQI 950
Score = 30.7 bits (66), Expect = 0.75
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTG 166
+AF P N + GMD+ T+ N R ++ +L G+ ++ F + ++L
Sbjct: 871 LAFHPQDNNIIAIGMDDS-TIQIYNVR----VDEVKSKLKGHSKRITGLAFSNVLNVLVS 925
Query: 167 SG-DMKICVWDLEAGKRE 183
SG D ++CVW+ + +++
Sbjct: 926 SGADAQLCVWNTDGWEKQ 943
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 30.7 bits (66), Expect = 0.75
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 57 GHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLR--SAWVMSVAFAPSGN 114
G +VN + +S D + + + + + + D + G K L + F P G
Sbjct: 198 GDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGK 257
Query: 115 FVACGGMDNMCTVYDVNN 132
+V G D +++ N
Sbjct: 258 YVLSGSGDGTLHAWNIEN 275
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to
gene PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 30.7 bits (66), Expect = 0.75
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQI 96
K L H VN+V ++ D ++GS D ++I+WD W V++
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWD-WQTASVKL 91
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 143 RELAGYEGFLSSCRFLDDTHIL-TGSGDMKICVWDLEAGKREMEFDA-HAGDVVSISLSP 200
++L ++G +++ F D IL +GS D ++ +WD + ++ FD+ H ++ P
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 30.7 bits (66), Expect = 0.75
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 7/104 (6%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHI 163
V VAF+P+ C D+ C + + R T V + + DD I
Sbjct: 295 VEDVAFSPTSAQEFCSVGDDSCLIL-WDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLI 353
Query: 164 LTGSGDMKICVWDLE------AGKREMEFDAHAGDVVSISLSPD 201
LTGS D + ++D G +F+ H V+ + SPD
Sbjct: 354 LTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPD 397
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 30.7 bits (66), Expect = 0.75
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 58 HLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK 93
H +VN +++S D + +G +G L++W +G K
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGKK 317
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 30.7 bits (66), Expect = 0.75
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 53 KTLKGHLNKV--NSVHYSG-DSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAF 109
K+ G L+ V N++ +S S VTG +G +I W+ S ++ +P S + S+AF
Sbjct: 223 KSRNGRLDGVCINAIEFSPCGSGTFVTGDNEGYVISWNAKSRRRLNELPRYSNSIASLAF 282
Query: 110 APSGNFVA 117
+G +A
Sbjct: 283 DHTGELLA 290
>At1g65580.1 68414.m07439 endonuclease/exonuclease/phosphatase
family protein similar to inositol polyphosphate
5-phosphatase II isoform (GI:15418718) [Mus musculus];
contains 6 (5 weak) Pfam: Pf00400 WD domain, G-beta
repeats and Pfam PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 1101
Score = 30.7 bits (66), Expect = 0.75
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 137 GAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSI 196
G ++E A YE C F + + G + + VWDLE GK + AH+G V+ +
Sbjct: 433 GNGNCLQEFA-YESSGILCMFTFCSRLWVGYSNGTVQVWDLE-GKLLGGWVAHSGPVIKM 490
Query: 197 SLSPDY 202
++ Y
Sbjct: 491 AIGAGY 496
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 30.7 bits (66), Expect = 0.75
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 17/179 (9%)
Query: 10 ALKKELTD---LISKVKADQEKLADAKLAEKCSDLGDVPK---IRFVTKKTLKGHLNKVN 63
+L+ +LT+ L+S + D K A G + K I V K+ GH ++
Sbjct: 48 SLQVDLTEGRYLLSGAADGSAAVFDVKRATDYEASGLIAKHKCIFTVRKQHENGHKYAIS 107
Query: 64 S-VHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQ--IIPLRSAWVMSVAFAPSGNFVACGG 120
S + Y D+ +TGS D + +WDT + V +P + + A S +A G
Sbjct: 108 SAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHTLIAAGT 167
Query: 121 MDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH--ILTGSGDMKICVWDL 177
D + D+ A+GA L+G+ + S + + + TG D I WD+
Sbjct: 168 DDVQVRLCDI----ASGA--FSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 51 TKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
T L+GH VN+ ++ + + T D ++I+W
Sbjct: 391 TTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVW 426
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 30.3 bits (65), Expect = 0.99
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSG 91
K LKGH + + V Y+ H + S+ G LI+ + SG
Sbjct: 129 KKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASG 167
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 30.3 bits (65), Expect = 0.99
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD 87
LKGH + V + +S +S +T S DG + +W+
Sbjct: 285 LKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN 317
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 30.3 bits (65), Expect = 0.99
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKV 94
K+ L+GH K+ + +S V+ DGKL +W T S K+
Sbjct: 504 KEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKL 546
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 30.3 bits (65), Expect = 0.99
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKV-QIIPLRSAWVMSVAFAPSGNFVACGG 120
+ S+ D G+ L +D +G + + S + SV P +A G
Sbjct: 262 ITSIAEDPDGHTIYVGNASADLASFDIRTGKLLGSFLGKCSGSIRSVVRHPQHQVIASCG 321
Query: 121 MDNMCTVYDVNNRDATGAAKMVRELAG 147
+D VYDV R A + + L G
Sbjct: 322 LDRYLRVYDVKTRQLISAVFLKQHLTG 348
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 149 EGFLSSCRFLDDTHILTGSGDMKICVWDLEA 179
EG+ + + ++L+GS D +IC+WD+ A
Sbjct: 171 EGYGLAWSSFKEGYLLSGSQDQRICLWDVSA 201
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 29.9 bits (64), Expect = 1.3
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 16 TDLISKVKADQEKLADAKLAEKCSDLG-----DVPKIRFVTKKTLKGHLNKVNSVHYSGD 70
+D ++++ + A + CS G D + V++ G+ ++ S Y G
Sbjct: 83 SDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDT-GNDQEIFSFSYGGA 141
Query: 71 SRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAW---VMSVAFAPS-GNFVACGGMDNMCT 126
+ + + G ++++WD W +K Q+ L + V V F P+ N + +D +
Sbjct: 142 ADNLLAGGCKEQVLLWD-WRNSK-QVACLEESHMDDVTQVHFVPNKPNKLLSASVDGLIC 199
Query: 127 VY----DVNNRDATGAAKMVRELAGYEGFLSS--CRFLDDTHILTGSGDMKICVWDLEAG 180
++ D+N+ D + V G GFL + THI T + +W+ E G
Sbjct: 200 LFNTEGDINDDDHLESVINVGTSIGKIGFLGDGYKKLWCLTHIET------LSIWNWEDG 253
Query: 181 KREMEFDAHAGDVVSISLSPD 201
E+ + A ++ S S + D
Sbjct: 254 SCEVNLE-KARELASDSWTQD 273
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/78 (20%), Positives = 37/78 (47%)
Query: 10 ALKKELTDLISKVKADQEKLADAKLAEKCSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSG 69
+++K D I+ + ++ A+K + + + TL HL+ VN++ S
Sbjct: 229 SIEKAHDDAINAIVVSKDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISE 288
Query: 70 DSRHCVTGSLDGKLIIWD 87
D + +G+ D +++W+
Sbjct: 289 DGKVLYSGACDRSILVWE 306
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 50 VTKKTLKGHLNKVNS-VHYSGDSRHCVTGSLDGKLIIWDT 88
VT + GH +KV + +H G CV+G G + +W T
Sbjct: 527 VTGLAVGGHQDKVMALIHIEGTEPVCVSGDGGGGIFVWST 566
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 162 HILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSI 196
H+ TGSGD I W L+ G H V ++
Sbjct: 599 HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTL 633
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 29.5 bits (63), Expect = 1.7
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 11/131 (8%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW--DTWSGNKVQIIPLR--SAWVMSVAFAP 111
+GH KV+SV ++ + +GS+D IW + +K + + L+ + V + + P
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 112 S-GNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSGDM 170
+ VA D ++D +G EL+G ++ D TH+ G+ D
Sbjct: 77 KHSDLVATASGDKSVRLWDAR----SGKCTQQVELSGEN--INITYKPDGTHVAVGNRDD 130
Query: 171 KICVWDLEAGK 181
++ + D+ K
Sbjct: 131 ELTILDVRKFK 141
Score = 29.1 bits (62), Expect = 2.3
Identities = 39/176 (22%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 43 DVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSA 102
DV K + + ++ +N++ + + GD TG G + + S + + +A
Sbjct: 136 DVRKFKPLHRRKFNYEVNEI-AWNMPGDFFFLTTGL--GTVEVLSYPSLKPLDTLTAHTA 192
Query: 103 WVMSVAFAPSGNFVACGGMDNMCTVYDVNN----RDATGAAKMVRELA-GYEG-FLSSCR 156
+A P G + A G D++ +++D+++ R T VR ++ Y G +++S
Sbjct: 193 GCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASAS 252
Query: 157 ---FLDDTHILTGSGDMKI-CVWDLEAGKREMEFD--AHAGDVVSISLSPDYHTDK 206
F+D ++ TG +I C + + + +++ A+AGD +P Y+TD+
Sbjct: 253 EDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGD----DKNPKYNTDE 304
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHI 163
VM + F+P+G G D ++ N G ++ + + D T++
Sbjct: 282 VMDIDFSPTGREFVTGSYDRSVRIFPYNG----GHSREIYHTKRMQRVFCVKYSCDATYV 337
Query: 164 LTGSGDMKICVWDLEAGKR 182
++GS D + +W +A ++
Sbjct: 338 ISGSDDTNLRLWKAKASEQ 356
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 56 KGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQII-PLRSAWVMSVAFAPSGN 114
K H++ V + +S R VTGS D + I+ G+ +I R V V ++
Sbjct: 276 KDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDAT 335
Query: 115 FVACGGMDNMCTVYDVNNRDATG 137
+V G D ++ + G
Sbjct: 336 YVISGSDDTNLRLWKAKASEQLG 358
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 76 TGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTV 127
+ S+DG + +WD S V P V + + GN + G D CTV
Sbjct: 74 SASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTD--CTV 123
>At2g26610.1 68415.m03193 expressed protein ; expression supported
by MPSS
Length = 1249
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 73 HCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAP--SGNF----VACGGMDNMCT 126
H VTG G + WD SGN + + + F+P SG+ + DN +
Sbjct: 713 HVVTGDKLGNIRWWDVVSGNSSSFNTCKEG-IKKIKFSPVFSGDISRGRITVLFYDNTFS 771
Query: 127 VYDVNNRDATGAAKMVRELAG 147
+YD+++ D + M ++ G
Sbjct: 772 IYDLDSPDPLAISLMRPQIPG 792
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 29.5 bits (63), Expect = 1.7
Identities = 35/164 (21%), Positives = 63/164 (38%), Gaps = 15/164 (9%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNK------VQIIPLRSAWVMS 106
+++ H + VNSV S +GS DG + W K +Q + + + V +
Sbjct: 242 ESIPAHDDAVNSV-VSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTA 300
Query: 107 VAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHILTG 166
+A + +G V G D + ++ + G +LA C + + + +G
Sbjct: 301 LAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGILKGHKLAVL------CLEVAGSLVFSG 354
Query: 167 SGDMKICVWDLEAGKRE--MEFDAHAGDVVSISLSPDYHTDKVR 208
S D ICVW + H G V +++ D + R
Sbjct: 355 SADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERR 398
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 75 VTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDVN 131
V+G G + WD+ G +Q V ++A +PS N V G D +Y ++
Sbjct: 263 VSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVILYKLS 319
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 4 EDPETTALK--KELTDLISKVKADQEKLADAKLAEKCSDLGDVPKIRFVTK-KTLKGHLN 60
+D E + ++ EL +L KV+A LA A + C + + + +T ++L
Sbjct: 141 DDEEESGVEDDSELDELDEKVEALDRHLA-AACDDGCVRIYYISESDKLTYYRSLPRVTG 199
Query: 61 KVNSVHYSGDSRHCVTGSLDGKLIIWD 87
+ SV +S D++ +GS DG + WD
Sbjct: 200 RALSVTWSADAQRIFSGSSDGLIRCWD 226
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 50 VTKKTLKGHLN-KVNSVHYSGDSRHCVTGSLDGKLIIWD 87
V K TL+G VNSV SGD G DG +I W+
Sbjct: 259 VLKATLEGRAEVSVNSVVVSGDGNWVYGGGSDGFVIGWE 297
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 44 VPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTG-SLDGKLIIWDTWSGNK 93
V I + +GH +V + + + H + SLDGK+ +W G++
Sbjct: 206 VLNINTALRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKISEGSE 256
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 49 FVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL 99
F L GH V+ + S TGS D L +WD SG ++ L
Sbjct: 141 FALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKL 191
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 140 KMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVWDLEAGKREMEFDAHAGDVVSI 196
K + L G+ G ++ C + + +GS D I +WDL + M H G V S+
Sbjct: 249 KYLTSLEGHSGEVT-CFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSL 304
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPL 99
+L+GH ++ + S + S+DG L +WD SG V I L
Sbjct: 126 SLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINL 171
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 28.7 bits (61), Expect = 3.0
Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 14/160 (8%)
Query: 25 DQEKLADAKLAEKCSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLI 84
D KLA + + C + + P + + + K H + + +S DS T S DG
Sbjct: 133 DGSKLAVGGV-DGCLRIMEWPNLSVILDEP-KAH-KSIRDMDFSLDSEFLATTSTDGSAR 189
Query: 85 IWDTWSGNKVQIIPLRSAWVMSVA-FAPSGN--FVACG---GMDNMCTVYDVNNRDATGA 138
IW G + + + + F+ G F+ C G M VYD++ G
Sbjct: 190 IWKAEDGFPLSTLERSGDENIELCRFSKDGTKPFLFCAAQRGDTPMVNVYDISTWKKLGF 249
Query: 139 AKMVRELAGYEGFLSSCRFLDDTHILTGSGDMKICVWDLE 178
K+ R+ A + LD +I G D + V +++
Sbjct: 250 KKLSRKTAS-----TMAVSLDGKYIALGGKDGDVSVAEVK 284
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 51 TKKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW 86
T +T GH V + S D+ VTGS D +++W
Sbjct: 2660 TLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
>At3g17320.1 68416.m02214 F-box family protein contains F-box domain
Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein
interaction domain
Length = 409
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 62 VNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRS 101
++ V++ C+T ++ +L++W+ +SG I P S
Sbjct: 109 ISQVYHCDGLLLCITNEINSRLVVWNPYSGQTRWIEPRTS 148
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 52 KKTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIW--DTWSGNKVQIIPL 99
K LKGH + + +S V+ D +L W D+W K I L
Sbjct: 908 KTKLKGHQKHITGLAFSTALNILVSSGADAQLFFWTADSWEKKKSSAIQL 957
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 155 CRFLDDTHILTGSG-DMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
C F D +L +G D K+ +W++E + E + HA + + P+
Sbjct: 514 CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPN 561
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 155 CRFLDDTHILTGSG-DMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
C F D +L +G D K+ +W++E + E + HA + + P+
Sbjct: 516 CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPN 563
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 155 CRFLDDTHILTGSG-DMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
C F D +L +G D K+ +W++E + E + HA + + P+
Sbjct: 516 CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPN 563
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 155 CRFLDDTHILTGSG-DMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
C F D +L +G D K+ +W++E + E + HA + + P+
Sbjct: 516 CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPN 563
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 155 CRFLDDTHILTGSG-DMKICVWDLEAGKREMEFDAHAGDVVSISLSPD 201
C F D +L +G D K+ +W++E + E + HA + + P+
Sbjct: 516 CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPN 563
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 28.3 bits (60), Expect = 4.0
Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 9/128 (7%)
Query: 76 TGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFV-ACGGMDNMCTVYDVNNRD 134
+ S D L IWD IIP ++S + + + A +D V+DV +
Sbjct: 167 SASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYR 226
Query: 135 ATGAAKMVRELAGYEGFLSSCRFLDDTHILTGSG--DMKICVWDLEAGKREM-EFDAHAG 191
A L G+ + +F L S DM +C+WD + +D H
Sbjct: 227 VPLAV-----LNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDYMVEDALVGRYDHHTE 281
Query: 192 DVVSISLS 199
V I +S
Sbjct: 282 FAVGIDMS 289
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 27.9 bits (59), Expect = 5.3
Identities = 31/162 (19%), Positives = 66/162 (40%), Gaps = 19/162 (11%)
Query: 46 KIRFVTKKTLKGHLNKVNSVHYSGDSRH-----CVTGSLDGKLIIWDTWSGNKVQIIPLR 100
K ++ ++K L GH + V + + + V+GS+D + +W+ +G +Q +
Sbjct: 53 KRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Query: 101 SAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD 160
V VA + +D T+ N ++V ++ + + L
Sbjct: 113 QMQVTGVAI--DNEDIVSSSVDQ--TLKRWRN------GQLVESWDAHQSPIQAVIRLPS 162
Query: 161 THILTGSGDMKICVWDLEAGKREME-FDAHAGDVVSISLSPD 201
+++GS D + +W GK ++ H V +++ PD
Sbjct: 163 GELVSGSSDASLKLW---KGKTSLQTLSGHTDTVRGLAVMPD 201
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 27.9 bits (59), Expect = 5.3
Identities = 31/162 (19%), Positives = 66/162 (40%), Gaps = 19/162 (11%)
Query: 46 KIRFVTKKTLKGHLNKVNSVHYSGDSRH-----CVTGSLDGKLIIWDTWSGNKVQIIPLR 100
K ++ ++K L GH + V + + + V+GS+D + +W+ +G +Q +
Sbjct: 53 KRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Query: 101 SAWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDD 160
V VA + +D T+ N ++V ++ + + L
Sbjct: 113 QMQVTGVAI--DNEDIVSSSVDQ--TLKRWRN------GQLVESWDAHQSPIQAVIRLPS 162
Query: 161 THILTGSGDMKICVWDLEAGKREME-FDAHAGDVVSISLSPD 201
+++GS D + +W GK ++ H V +++ PD
Sbjct: 163 GELVSGSSDASLKLW---KGKTSLQTLSGHTDTVRGLAVMPD 201
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 111 PSGNF-VACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHIL-TGSG 168
P NF V+CG +N V + + ++V+ + ++ +S D+ IL TGS
Sbjct: 1013 PLENFLVSCGNWENSFHVISLTD------GRVVQSIRHHKDVVSCVAVTADSTILATGSY 1066
Query: 169 DMKICVWDL 177
D + VWD+
Sbjct: 1067 DTTVMVWDI 1075
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 53 KTLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWD 87
++++ H + V+ V + DS TGS D +++WD
Sbjct: 1040 QSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWD 1074
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 55 LKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQII--PLRSAWVMSVAFAPS 112
L GH + + ++ S D ++GS DG + G ++ + P SA V +A +
Sbjct: 1107 LCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHPSGSA-VSKLAASHH 1165
Query: 113 GNFVACGGMDNMCTVYDVNNR 133
G V G D +Y +N +
Sbjct: 1166 GRIVLYGDDDLSLHLYSINGK 1186
>At1g26330.1 68414.m03211 hypothetical protein
Length = 1196
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 71 SRHCVTGSLDGKLIIWDTWSGNKV 94
S H V G+LDG + +WD +G K+
Sbjct: 1134 SGHGVAGTLDGLVYMWDLSTGTKL 1157
>At1g11290.1 68414.m01297 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 809
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 38 CSDLGDVPKIRFVTKKTLKGHLNKVNSVHYSGDSRHCVTGSLD 80
C+DLGD+ + RF+ K +++ L++ SV S S +C +D
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
>At5g45410.1 68418.m05580 expressed protein similar to unknown
protein (pir||T05524)
Length = 342
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 178 EAGKREMEFDAHAGDVVSISLS 199
EAG+R ++F+ AG V +ISLS
Sbjct: 79 EAGRRALQFNPLAGKVATISLS 100
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIP 98
T H +V +++S D +G G ++W+ +G K Q++P
Sbjct: 241 TFNWHSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGKK-QLLP 284
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 104 VMSVAFAPSGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTHI 163
V S+AF P A GG D ++D NN+ K + + + Y +S+ F D +
Sbjct: 244 VNSIAFHPIYGTFATGGCDGFVNIWDGNNK------KRLYQYSKYPTSISALSFSRDGQL 297
Query: 164 L 164
L
Sbjct: 298 L 298
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 77 GSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYDV 130
G G + +W S + + V SVAF P+G+ +A G + ++D+
Sbjct: 257 GHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDL 310
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 87 DTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYD 129
+T G ++ + L +W V ++PSGN +A G +M D
Sbjct: 191 ETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVD 233
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 87 DTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVYD 129
+T G ++ + L +W V ++PSGN +A G +M D
Sbjct: 191 ETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVD 233
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 76 TGSLDGKLIIW------DTWSGNKVQIIPLRSAWVMSVAFAPSGNFVACGGMDNMCTVY 128
+GS DGK+IIW + W G KV + W V+++ +GN +A +N TV+
Sbjct: 231 SGSQDGKVIIWTVGKEGEQWEG-KVLKDFMTPVW--RVSWSLTGNLLAVSDGNNNVTVW 286
>At2g17525.1 68415.m02027 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat; gene
structure supported by cDNA sequence and Brassica genome
sequence alignments.
Length = 626
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 18 LISKVKADQEKLADAKLAEKCSDLGDVPKIRFVTK 52
LIS +Q+ + L EKC LG VP + VTK
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
>At1g32140.1 68414.m03954 F-box family protein contains F-box domain
Pfam:PF00646
Length = 591
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 61 KVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSVAFA 110
+++ V Y CVT + KL++W+ + G +++ I R+ + + V +A
Sbjct: 97 EISKVFYCEGLLLCVTRNHSSKLVVWNPYLG-EIRWIKTRNDYHIGVTYA 145
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 27.5 bits (58), Expect = 7.0
Identities = 28/141 (19%), Positives = 58/141 (41%), Gaps = 11/141 (7%)
Query: 54 TLKGHLNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQII--PLRSAWVMSVAFAP 111
TL+ H + VN++ + D +GS D +++W+ + + LR ++
Sbjct: 275 TLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFN 334
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSC-----RFLDD-THILT 165
+ + G D ++ R + + L+G+ + S + LDD I++
Sbjct: 335 VSDLLLSGSADRTVRIW---RRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIIS 391
Query: 166 GSGDMKICVWDLEAGKREMEF 186
GS D ++ W + K + F
Sbjct: 392 GSLDGEVKCWKVSVTKPDNSF 412
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 112 SGNFVACGGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRF--LDDTHILTGSGD 169
S +A G +D +++ + ++ G VR+L+ ++G + F + +G+ D
Sbjct: 79 SDGLIAGGLVDGNIGLWNPISSES-GEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADD 137
Query: 170 MKICVWDLEAGKREMEFDAHAGDVVSISLS 199
+C+WDL + + G + +S
Sbjct: 138 GTVCIWDLANPSKPSHYLKGTGSYMQSEIS 167
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 27.1 bits (57), Expect = 9.2
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 45 PKIRFVTKKTLKGHLNKVNSVHYSG---DSRHCVTGS-LDGKLIIWDTWSGNKVQIIPLR 100
P++ +T ++L+G+++ ++ S H G+ L L+ +T G+ LR
Sbjct: 226 PEVNILTPRSLQGNVSSECTIWTSDCNISGSHAAIGTDLGAGLVDLETGVGSYF----LR 281
Query: 101 S-AWVMSVAFAPSGNFVACGGMDNMCTVYDVNNRDA 135
S + V ++ F SGN V CG + D+ R A
Sbjct: 282 SKSDVFALQFHQSGNIVHCGLRNGAIVSVDLRERPA 317
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 119 GGMDNMCTVYDVNNRDATGAAKMVRELAGYEGFLSSCRFLDDTH--ILTGSGDMKICVWD 176
G D V++VN + AT ++ ++ ++ ++ C L +T +L+GS D I VW
Sbjct: 869 GFSDGSIRVWNVNKKIAT----LLWDIKEHKSTVT-CFSLSETGECVLSGSADKTIRVWQ 923
Query: 177 LEAGKRE 183
+ GK E
Sbjct: 924 IVKGKLE 930
>At2g46040.1 68415.m05727 ARID/BRIGHT DNA-binding
domain-containing protein / ELM2 domain-containing
protein contains Pfam profiles PF01388: ARID/BRIGHT DNA
binding domain, PF01448: ELM2 domain
Length = 562
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 5 DPETTALKKELTDLISKVKADQEKLADAKLAEKCSDLGDVP 45
+PE+T +K++ +LIS + L D+ LAE CS G +P
Sbjct: 32 NPESTGFEKKIKELISLFR----PLLDSFLAEFCSADGFLP 68
>At2g17830.1 68415.m02065 F-box family protein contains Pfam domain,
PF00646: F-box domain
Length = 394
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 59 LNKVNSVHYSGDSRHCVTGSLDGKLIIWDTWSGNKVQIIPLRSAWVMSV 107
++ V+SV + C+T L+ +L++W+ + G I P S + +
Sbjct: 104 VDNVSSVFHCDGLLLCITKDLNFRLVVWNPYFGQTRWIQPRNSYHIKDI 152
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,271,141
Number of Sequences: 28952
Number of extensions: 220587
Number of successful extensions: 1486
Number of sequences better than 10.0: 213
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 717
Number of HSP's gapped (non-prelim): 663
length of query: 209
length of database: 12,070,560
effective HSP length: 78
effective length of query: 131
effective length of database: 9,812,304
effective search space: 1285411824
effective search space used: 1285411824
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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