GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000522-TA|BGIBMGA000522-PA|IPR011009|Protein kinase-like
         (192 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical ...    34   0.056
Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr...    33   0.13 
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc...    33   0.13 
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc...    33   0.13 
AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPas...    33   0.13 
Z70284-16|CAE17884.1|  155|Caenorhabditis elegans Hypothetical p...    29   1.6  
U80028-7|AAG23984.1|  370|Caenorhabditis elegans Serpentine rece...    28   3.7  
U41034-6|AAU05557.1|  538|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U41034-5|AAA82381.1|  567|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical p...    28   4.9  
U20862-5|AAK29861.1|  483|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AF016687-6|AAC48092.3|  309|Caenorhabditis elegans Serpentine re...    27   6.5  
Z78540-4|CAB01734.2|  624|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical
           protein Y41D4A.4 protein.
          Length = 580

 Score = 34.3 bits (75), Expect = 0.056
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 140 EWVKEENEF-KRFKKYAEPSFGKHYRYPSKIFHNF 173
           +W K E +F KRF KY +PSF +H  +   IF++F
Sbjct: 187 QWSKSEVDFTKRFDKYLDPSFFQHRIHWFSIFNSF 221


>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical protein
            W09C2.3c protein.
          Length = 1249

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 136  VKKDEWVKEENEFKR-FKKYAEPSFGKHYRYPSKIFHNFKSEETKETIENVD 186
            VK  +W KE+ E K+ FK+  + + GK     SK  H  + ++T   +E+++
Sbjct: 1196 VKSADWAKEQKEKKKTFKQIKQVARGKSLDKDSKKHHKKRKDQTNVDMEDIE 1247


>Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical protein
            W09C2.3b protein.
          Length = 1228

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 136  VKKDEWVKEENEFKR-FKKYAEPSFGKHYRYPSKIFHNFKSEETKETIENVD 186
            VK  +W KE+ E K+ FK+  + + GK     SK  H  + ++T   +E+++
Sbjct: 1175 VKSADWAKEQKEKKKTFKQIKQVARGKSLDKDSKKHHKKRKDQTNVDMEDIE 1226


>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical protein
            W09C2.3a protein.
          Length = 1252

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 136  VKKDEWVKEENEFKR-FKKYAEPSFGKHYRYPSKIFHNFKSEETKETIENVD 186
            VK  +W KE+ E K+ FK+  + + GK     SK  H  + ++T   +E+++
Sbjct: 1199 VKSADWAKEQKEKKKTFKQIKQVARGKSLDKDSKKHHKKRKDQTNVDMEDIE 1250


>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
            ATPase (136.9kD) (mca-1) protein.
          Length = 1249

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 136  VKKDEWVKEENEFKR-FKKYAEPSFGKHYRYPSKIFHNFKSEETKETIENVD 186
            VK  +W KE+ E K+ FK+  + + GK     SK  H  + ++T   +E+++
Sbjct: 1196 VKSADWAKEQKEKKKTFKQIKQVARGKSLDKDSKKHHKKRKDQTNVDMEDIE 1247


>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
            ATPase (136.6kD) (mca-1) protein.
          Length = 1252

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 136  VKKDEWVKEENEFKR-FKKYAEPSFGKHYRYPSKIFHNFKSEETKETIENVD 186
            VK  +W KE+ E K+ FK+  + + GK     SK  H  + ++T   +E+++
Sbjct: 1199 VKSADWAKEQKEKKKTFKQIKQVARGKSLDKDSKKHHKKRKDQTNVDMEDIE 1250


>AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPase
            protein.
          Length = 1228

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 136  VKKDEWVKEENEFKR-FKKYAEPSFGKHYRYPSKIFHNFKSEETKETIENVD 186
            VK  +W KE+ E K+ FK+  + + GK     SK  H  + ++T   +E+++
Sbjct: 1175 VKSADWAKEQKEKKKTFKQIKQVARGKSLDKDSKKHHKKRKDQTNVDMEDIE 1226


>Z70284-16|CAE17884.1|  155|Caenorhabditis elegans Hypothetical
           protein K07F5.16 protein.
          Length = 155

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 127 NWLRPMFPYVKKDEWVKEENEFKRFKKYAEPSFGKHY--RYPSKIFHNFKSEETKET 181
           +WL   FP V  +++ K ++ F+    +A P          P K+  NFKSE+++++
Sbjct: 79  SWLHSPFP-VSFEDFTKSQDTFQMSTHWAVPKSQPSIAANQPEKLSQNFKSEKSEKS 134


>U80028-7|AAG23984.1|  370|Caenorhabditis elegans Serpentine
           receptor, class w protein124 protein.
          Length = 370

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 22  LNLPTTEKKFRAFLPTKHNIEEGVVVLIDGYKIGMTIIAFAAGLSSADSFLHLN 75
           ++L  T KK RA +  K+N   G   L+    I   I+ F  GLS   ++L ++
Sbjct: 246 MDLLKTRKKCRARISAKNNNSRGKTGLVFCVAIMFFIVEFPFGLSVGSAWLFMS 299


>U41034-6|AAU05557.1|  538|Caenorhabditis elegans Hypothetical
           protein M02D8.4c protein.
          Length = 538

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 113 VWRRRFHYMDQFVPNWLRPMFPYVKKDEWVKEENEFKRFKKYAEPSFGKHYRYPSKIFH- 171
           +WR++  + D    +W+  +  Y       KE ++  +   +  P   K   Y  KIFH 
Sbjct: 447 LWRQKEQFSDGVGYSWIDTLMKYCAAKITDKEFSQASKLFPHNTP-HSKEAFYMRKIFHE 505

Query: 172 NFKSEETKETI 182
            F SE+   T+
Sbjct: 506 QFPSEQAALTV 516


>U41034-5|AAA82381.1|  567|Caenorhabditis elegans Hypothetical
           protein M02D8.4a protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 113 VWRRRFHYMDQFVPNWLRPMFPYVKKDEWVKEENEFKRFKKYAEPSFGKHYRYPSKIFH- 171
           +WR++  + D    +W+  +  Y       KE ++  +   +  P   K   Y  KIFH 
Sbjct: 447 LWRQKEQFSDGVGYSWIDTLMKYCAAKITDKEFSQASKLFPHNTP-HSKEAFYMRKIFHE 505

Query: 172 NFKSEETKETI 182
            F SE+   T+
Sbjct: 506 QFPSEQAALTV 516


>U28739-10|AAR25656.1|  683|Caenorhabditis elegans Hypothetical
           protein C17G10.6a protein.
          Length = 683

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 3/29 (10%)

Query: 165 YPSKI---FHNFKSEETKETIENVDDSSD 190
           YP KI   +HNF+S + K+  EN +++ D
Sbjct: 516 YPGKIGDDYHNFESMDCKQERENYEENED 544


>U20862-5|AAK29861.1|  483|Caenorhabditis elegans Hypothetical
           protein W06E11.1 protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 105 GNYCETLRVWRRRFHYMDQFVPNWLRPMFPYVKKDEWVKEENEFKR 150
           G  CE  R WR R     QF+ +         +K +WV++ NE ++
Sbjct: 425 GVKCEATRSWRLRVERDAQFLEDPAMKKHVVEQKAKWVQKFNELEK 470


>AF016687-6|AAC48092.3|  309|Caenorhabditis elegans Serpentine
           receptor, class h protein282 protein.
          Length = 309

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)

Query: 145 ENEFKRFKKYAEPSFGKHYRYPSKIFH 171
           EN F  F  +AE ++ +H RYP K+F+
Sbjct: 114 ENRF--FVLFAEKTWWRHVRYPFKVFN 138


>Z78540-4|CAB01734.2|  624|Caenorhabditis elegans Hypothetical
           protein C33G3.6 protein.
          Length = 624

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 15/51 (29%), Positives = 23/51 (45%)

Query: 140 EWVKEENEFKRFKKYAEPSFGKHYRYPSKIFHNFKSEETKETIENVDDSSD 190
           E +KEE E ++ +   + S+   YR  S   H  K E +   I   D + D
Sbjct: 284 EKIKEEAERQQLEPEMQKSYNNDYRQSSINSHQDKYENSSNGINYTDRNQD 334


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.323    0.139    0.450 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,459,821
Number of Sequences: 27539
Number of extensions: 243957
Number of successful extensions: 607
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 603
Number of HSP's gapped (non-prelim): 15
length of query: 192
length of database: 12,573,161
effective HSP length: 78
effective length of query: 114
effective length of database: 10,425,119
effective search space: 1188463566
effective search space used: 1188463566
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 57 (27.1 bits)