GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000520-TA|BGIBMGA000520-PA|IPR004145|Protein of unknown
function DUF243
         (309 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.51 
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   3.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   6.2  
DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.        23   8.3  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.5 bits (58), Expect = 0.51
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 272 ISGDFGATGGDETIVEGGHGGATSTPYGPPGH 303
           + G  GA GG  +    G G A+ +PYG  GH
Sbjct: 676 VGGGSGAGGGAGSSGGSGGGLASGSPYGGGGH 707


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 4/30 (13%)

Query: 275 DFGATGGDETIVEGGHGGATSTPYGPPGHV 304
           D G  GG     +GG GG++S   GPP H+
Sbjct: 235 DSGTEGGSS---QGG-GGSSSKKGGPPPHI 260


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 8/28 (28%), Positives = 17/28 (60%)

Query: 178  KPEEQPDIIIPTPAPTQPSKPEVYFIKY 205
            +P+ +P I++P P+  +PS      ++Y
Sbjct: 1159 QPKTRPSIMLPGPSAVEPSDEMPKSLRY 1186


>DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 4/22 (18%)

Query: 278 ATGGDETIVEGGHGGATSTPYG 299
           AT GD     GG GGAT TP G
Sbjct: 29  ATSGDG----GGGGGATDTPPG 46


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.138    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,251
Number of Sequences: 2123
Number of extensions: 5387
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 4
length of query: 309
length of database: 516,269
effective HSP length: 64
effective length of query: 245
effective length of database: 380,397
effective search space: 93197265
effective search space used: 93197265
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 48 (23.4 bits)