Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000519-TA|BGIBMGA000519-PA|undefined
         (108 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   1.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   1.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    19   8.4  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 17  VPETTFPQYGFPQSIN 32
           V + TF  YG+P+ +N
Sbjct: 118 VVDATFASYGWPKGLN 133


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 17  VPETTFPQYGFPQSIN 32
           V + TF  YG+P+ +N
Sbjct: 118 VVDATFASYGWPKGLN 133


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
          protein chaoptin protein.
          Length = 782

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 7  VSLKTGHQYNVPETTFPQYGFPQSINLNGNMAQLRHVG 44
          + L      NVP+ +F      + ++L  N  ++ H G
Sbjct: 47 LDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIEMIHRG 84


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.132    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,964
Number of Sequences: 317
Number of extensions: 892
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 108
length of database: 114,650
effective HSP length: 49
effective length of query: 59
effective length of database: 99,117
effective search space:  5847903
effective search space used:  5847903
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)
S2: 38 (19.4 bits)