GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000519-TA|BGIBMGA000519-PA|undefined
         (108 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           25   0.20 
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           25   0.20 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   4.3  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                20   5.7  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 25.0 bits (52), Expect = 0.20
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 67 KRHKTKGQDSPFNPERPPEG 86
          +RH+   Q  P+NPE  P G
Sbjct: 54 RRHRYNFQLKPYNPEHKPPG 73


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.20
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 67 KRHKTKGQDSPFNPERPPEG 86
          +RH+   Q  P+NPE  P G
Sbjct: 55 RRHRYNFQLKPYNPEHKPPG 74


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
          protein.
          Length = 411

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 9  LKTGHQYNVPETTFPQYGFPQSINLNGN 36
          +KT + +NV E  FP      ++  NG+
Sbjct: 18 IKTIYSWNVIEYNFPNDNIRNTLISNGD 45


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 70 KTKGQDSPFNPERP 83
          +TK Q SPFN + P
Sbjct: 42 ETKNQLSPFNIDTP 55


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.132    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,483
Number of Sequences: 429
Number of extensions: 1263
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 108
length of database: 140,377
effective HSP length: 50
effective length of query: 58
effective length of database: 118,927
effective search space:  6897766
effective search space used:  6897766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)
S2: 38 (19.4 bits)