Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000518-TA|BGIBMGA000518-PA|IPR001932|Protein phosphatase
2C-like, IPR000222|Protein phosphatase 2C
(445 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57481| Best HMM Match : PP2C (HMM E-Value=2.9e-32) 252 6e-67
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 3e-40
SB_45543| Best HMM Match : PP2C (HMM E-Value=6.00036e-42) 52 9e-07
SB_25482| Best HMM Match : PP2C (HMM E-Value=2.4e-24) 52 1e-06
SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35) 40 0.005
SB_13499| Best HMM Match : PP2C (HMM E-Value=1.8e-06) 38 0.012
SB_17048| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.15
SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09) 32 1.1
SB_67| Best HMM Match : Ribosomal_S13_N (HMM E-Value=5.2) 31 1.4
SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34) 31 1.4
SB_30316| Best HMM Match : Peptidase_S49 (HMM E-Value=2e-09) 30 3.3
SB_19571| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.3
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 30 3.3
SB_57289| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.037) 30 4.3
SB_1720| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_8638| Best HMM Match : PP2C (HMM E-Value=6.5e-32) 29 7.6
SB_47923| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
>SB_57481| Best HMM Match : PP2C (HMM E-Value=2.9e-32)
Length = 435
Score = 252 bits (616), Expect = 6e-67
Identities = 160/432 (37%), Positives = 241/432 (55%), Gaps = 26/432 (6%)
Query: 16 VTTILRKNEFNKEFTTGSIKCYDSNQLASNDPIEDTRCEAQC-RMTSGLIMGVFDGHGGP 74
V ++ + E + + TG I Y++NQLASN P+ED + + G + GV DGHGG
Sbjct: 13 VNAMISRLEKSGKIDTGIIDRYETNQLASNQPMEDRKFVVRLLHQDGGYLFGVMDGHGGN 72
Query: 75 ACAQVISKRLVDYIAAALLPIETL--HKYIQQDPREALVDTFNNRVEILQELKILYERSF 132
ACA + KRL DYIA +LL L H + + L T N S
Sbjct: 73 ACAHNVCKRLPDYIALSLLHRHVLLAHPDLMPKLTDYLTITQNEDHCYNSANDPACRNSL 132
Query: 133 RQYLAELANLPHEGYNVPT-ALEQAIIKIDQDLSKEAVEPYK--LNQVINPQTLSVALSG 189
+Y EL ++ + ++ +A I++DQD+ EAV+ K L + + A +G
Sbjct: 133 NKYFYELQDMVEAHVEMHVRSIREAYIRLDQDIRNEAVKESKSKLPEGSSCHAFDAANAG 192
Query: 190 AVACVTHVDGPNLHIANVGDCNAVLGILTEDKEWIAKKITKEHNSENFDELKRIWNEHPD 249
A A V ++ G L +AN GDC AVLG+ ED W A +++ +H + N +E++RI N+HP
Sbjct: 193 ACALVAYIQGTELFLANAGDCRAVLGVQGEDGCWSAMQLSSDHTAGNPEEVQRILNQHPP 252
Query: 250 NERKTVIRRDRLLGELAPLRSLGDYRYKWPIEILMKV-AVPLIGPKAIPANYHTPPYLTA 308
E TVIR +RLLG LAPLR+ GD R+KW + KV + + P + +++TPPYLTA
Sbjct: 253 EESTTVIRFERLLGRLAPLRAFGDARFKWDKKTQNKVYSKSSLNPMSEVEHFYTPPYLTA 312
Query: 309 KPDLYYHRLSTRDKFLILASDGLWDMMTPLQAVKLVGEHMKGKVFFNPLKLPRKNIQLGD 368
+P++ ++L DKFL+LA+DGLWDM++ + V V EH+ KV ++ G
Sbjct: 313 EPEVMSYQLQRTDKFLVLATDGLWDMLSNEEVVHYVQEHVCKKV---------EDTSKGV 363
Query: 369 INELLLHRKESLKSKPKD-RNAATHLIRHAIGGTEYGVDHSRLAHLLSLS-PDVSRMFRD 426
+ + + ++ L P D NAA+ L+R A+GG DH ++ LS+ PDV RM+RD
Sbjct: 364 LPQDITFNEQEL---PCDLNNAASCLVREALGGD----DHVAVSTTLSIPYPDV-RMYRD 415
Query: 427 DITVTVMYFDSE 438
DI+V V++F+ E
Sbjct: 416 DISVIVVFFNWE 427
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 163 bits (395), Expect = 3e-40
Identities = 95/244 (38%), Positives = 141/244 (57%), Gaps = 33/244 (13%)
Query: 199 GPNLHIANVGDCNAVLGILTEDKEWIAKKITKEHNSENFDELKRIWNEHPDNERKTVIRR 258
G I + DC AVLG + D W+A ++ + + + +E +R+W++HP E TVI+
Sbjct: 1164 GKITEIDSTRDCRAVLGSVNGDGSWVATPLSADQTANSREEFQRVWSQHP-GEEATVIKN 1222
Query: 259 DRLLGELAPLRSLGDYRYKWPIEILMKVAVPLIGPKAIPAN-YHTPPYLTAKPDLYYHRL 317
RLLG+L PLR+ GD +YKW + + G +P + Y +PPYLTA+P + +L
Sbjct: 1223 GRLLGQLQPLRAFGDIQYKWDRVTHNHILTQVYGGPIVPPHVYKSPPYLTAEPVVTKRQL 1282
Query: 318 STRDKFLILASDGLWDMMTPLQAVKLVGEHMKGKVFFNPLKLPRKNIQLGDINELLLHRK 377
++D+FLILA+DGLWD M+ +AV+LVG+ + G G +++L H
Sbjct: 1283 RSKDRFLILATDGLWDSMSSDKAVELVGQFVNG---------------AGRKSDVLEH-- 1325
Query: 378 ESLKSKPKDRNAATHLIRHAIGGTEYGVDHSRLAHLLSLSPDVSRMFRDDITVTVMYFDS 437
NAA+HLIRHAIGG DH +A +L + RM+RDDITVTV++F+S
Sbjct: 1326 ----------NAASHLIRHAIGGN----DHHFVAQMLLVPDQYRRMWRDDITVTVVFFNS 1371
Query: 438 EFLR 441
E +R
Sbjct: 1372 EEVR 1375
>SB_45543| Best HMM Match : PP2C (HMM E-Value=6.00036e-42)
Length = 375
Score = 52.0 bits (119), Expect = 9e-07
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 304 PYLTAKPDLYYHRLSTRDKFLILASDGLWDMMTPLQAVKLVGEHM 348
P+++ +PD+ + L ++F+ILA DGLWD + P QA+KLV EH+
Sbjct: 198 PFISGEPDVAEYALDGDEEFVILACDGLWDTVKPEQAIKLVKEHI 242
>SB_25482| Best HMM Match : PP2C (HMM E-Value=2.4e-24)
Length = 316
Score = 51.6 bits (118), Expect = 1e-06
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 28/149 (18%)
Query: 188 SGAVACVTHVDGPNLHIANVGDCNAVLGILTEDKEWIAKKITKEHNSENFDELKRIWNEH 247
SG+ A V AN GD GIL+ + E I T +H N DE RI
Sbjct: 14 SGSTAIALLVTPKYYIFANCGDSR---GILSHNGEVIYN--TVDHKPGNPDEKTRI---- 64
Query: 248 PDNERKTVIRRDRLLGELAPLRSLGDYRYKWPIEILMKVAVPLIGPKAIPANYHTPPYLT 307
+N +V+ + R+ G LA R+LGD+ YK ++ + L+ P+
Sbjct: 65 -ENAGGSVMIQ-RVNGALAVSRALGDFEYK--LDSSLHATKQLVSPE------------- 107
Query: 308 AKPDLYYHRLSTRDKFLILASDGLWDMMT 336
PD+++ S +D+F++LA DG+WD+MT
Sbjct: 108 --PDIFFQSRSDQDEFIVLACDGVWDVMT 134
>SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35)
Length = 916
Score = 39.5 bits (88), Expect = 0.005
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 188 SGAVACVTHVDGPNLHIANVGDCNAVLGILTEDKEWIAKKITKEHNSENFDELKRIWNEH 247
SG A V V NL +ANVGD VL + IA ++ +H E+ EL RI H
Sbjct: 267 SGTTAIVALVKDNNLTVANVGDSRCVL-----CRNGIALDMSIDHKPEDEKELNRI---H 318
Query: 248 PDNERKTVIRRDRLLGELAPLRSLGDYRYKWPIEI 282
+ T R+ G L R+LGD+ YK E+
Sbjct: 319 KAGGKVTC--EGRVNGGLNLSRALGDHSYKGQSEL 351
>SB_13499| Best HMM Match : PP2C (HMM E-Value=1.8e-06)
Length = 177
Score = 38.3 bits (85), Expect = 0.012
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Query: 188 SGAVACVTHVDGPNLHIANVGDCNAVLGILTED-KEWIAKKITKEHNSENFDELKRIWNE 246
SG V + G + +A+VGD AVL K A +T +H E E +RI
Sbjct: 14 SGTTVTVIIIRGHKMFVAHVGDSGAVLASKEPGTKRLEAYPLTDDHKPEAPHEKRRI--- 70
Query: 247 HPDNERKTVIRRD---RLLGELAPLRS-LGDYRYKWPIEILMKVAVPLIGPKAIPANYHT 302
++ +V+ R+ R+ E G R E + +AV +Y
Sbjct: 71 --EDLGGSVLARNGVYRVAWERPVCHGHRGPMRRSTKTERVPFLAVSRSLGDLWSFDYFR 128
Query: 303 PPYLTAK-PDLYYHRLS-TRDKFLILASDGLWDMMTPLQAVKLVGE 346
++ + PD+ + ++ DK +ILASDGLW ++ P AV+ V +
Sbjct: 129 GEFVVSPVPDVKVYTINPATDKHVILASDGLWGVVQPDDAVRCVSD 174
>SB_17048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 34.7 bits (76), Expect = 0.15
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 181 QTLSVALSGAVACVTHV-DGPNLHIANVGDCNAVLGILTEDKEWIAKKITKEHNSENFDE 239
+ LS SG A V + DG +L IA+ GD AVL + IT++H+ +E
Sbjct: 181 EDLSELSSGTTATVVLLRDGTDLAIASTGDSRAVL-----CRNGETSCITRDHHPSLEEE 235
Query: 240 LKRIWNEHPDNERKTVIRRDRLLGELAPLRSLGDYRYK 277
+RI + + E T R+ G LA RSLGD+ K
Sbjct: 236 QQRILSCNGRIE-STSSDLLRVNGRLAMTRSLGDFDLK 272
>SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 31.9 bits (69), Expect = 1.1
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 181 QTLSVALSGAVACVTHVDGPNLHIANVGDCNAVLGILTEDKEWIAKKITKEHNSENFDEL 240
Q ++ +L V V HV P NA + E++ IA++ K HNSE L
Sbjct: 311 QEINASLMSLVKPVEHVKRP---------MNAFMVWSREERRKIAQENPKMHNSEISKRL 361
Query: 241 KRIWNEHPDNERKTVIRRDRLLGELAPLRSLGDYRYK 277
W + D+++K + + L ++ DY+Y+
Sbjct: 362 GSEWKQLADDDKKPFVEEAKKL-RAQHMKEHPDYKYR 397
>SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09)
Length = 1338
Score = 31.9 bits (69), Expect = 1.1
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 28/159 (17%)
Query: 64 IMGVFDGHGGPACAQVISKRLVDYIAAALLPIETLHKYIQQDPREALVDTFNNRVEILQE 123
+ GVFDGH G + A ++RL P E L + + D + V +L++
Sbjct: 111 LYGVFDGHDGASVADFAAQRL---------PAELLLQQLTDDMTDEEVQL------VLRQ 155
Query: 124 LKILYERSFRQYLAE-LANLPHEGYNVPTALEQAIIKIDQDLSKEAVEPYKLNQVINPQT 182
E+ F Q + + LA +P L S EA + Y QV Q
Sbjct: 156 AFFAVEKGFFQSIDDALAERTELQLQIPEGLS----------SYEAYKQYP-RQVERIQE 204
Query: 183 LSVALSGAV-ACVTHVDGPNLHIANVGDCNAVLGILTED 220
L +SG A V + L++AN GD A+L ED
Sbjct: 205 LQEHISGGTTAVVALIFNNKLYVANAGDSRALLCKQLED 243
>SB_67| Best HMM Match : Ribosomal_S13_N (HMM E-Value=5.2)
Length = 243
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 220 DKEWIAKKITKEHNSENFDELKRIWNEHPDNERKTVIRRDRLLGELAPLR 269
DKE IA+K++ E E WN+ D RK +RDR GEL P R
Sbjct: 159 DKE-IAEKMSDRRKGELMPERMPDWNKMSDR-RKDERQRDRRKGELMPER 206
>SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34)
Length = 179
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 211 NAVLGILTEDKEWIAKKITKEHNSENFDELKRIWNEHPDNERKTVIRRDRLLGELAPLRS 270
NA + E++ IA++ K HNSE L W + D+++K + + L ++
Sbjct: 15 NAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLADDDKKPFVEEAKKL-RAQHMKE 73
Query: 271 LGDYRYK 277
DY+Y+
Sbjct: 74 HPDYKYR 80
>SB_30316| Best HMM Match : Peptidase_S49 (HMM E-Value=2e-09)
Length = 208
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 219 EDKEWIAKKITKEHNSENFDELKRIWNEHPDNERKTVIRRDRLLGELA 266
ED EW+ K + + HN NF +L + D KTV D LG+ A
Sbjct: 163 EDVEWVKKILAEVHN--NFIDLVKERRTKLDTTSKTVFSGDIFLGKEA 208
>SB_19571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 219 EDKEWIAKKITKEHNSENFDELKRIWNEHPDNERKTVIRRDRLLGELA 266
ED EW+ K + + HN NF +L + D KTV D LG+ A
Sbjct: 163 EDVEWVKKILAEVHN--NFIDLVKERRTKLDTTSKTVFSGDIFLGKEA 208
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 30.3 bits (65), Expect = 3.3
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 225 AKKITKEHNSE--NFDELKRIWNEHPDNERKTVIRRDRLLGELAPL-RSLGDYRYKWPIE 281
AK ++N E N D R +NE K R+ ++ PL + + P
Sbjct: 391 AKSKVSKNNPEAGNIDNKSRSRRNVEENEEKQGFRKQDIVVSRPPLVYTPSPDVFANPPV 450
Query: 282 ILMKVAVPLIGPKAIPANYHTPPYLTAKPDLYYHR 316
I+ + AV + P P YH P + KP + YHR
Sbjct: 451 IVPQPAVIVQRP---PVVYHQAPLVVHKPPIVYHR 482
>SB_57289| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.037)
Length = 396
Score = 29.9 bits (64), Expect = 4.3
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 102 IQQDPREALVDTFNNRVEILQELKILYERSFRQYLAELANLPHEGYNVPTALEQAIIKID 161
+Q+D L + R ++L+EL YE ++ A+L E E+ +I+
Sbjct: 36 MQEDYERQLTEMEEAREQVLEELTEYYENKLQEKTAQLDQSQEESRQQLREYEETKKQIE 95
Query: 162 QDLSKEAVE 170
+D +E ++
Sbjct: 96 EDADREILD 104
>SB_1720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 228 ITKEHNSENFDELKRIWNEHPDNERKTVIRRDRLLGELAPLRSLGDYRYK 277
++K+H+++N +EL R+ D + I+R+R +G RS+GDY K
Sbjct: 1 LSKDHDTQNEEELLRLARLGLDIVQ---IQRNRRIGSQENTRSIGDYCVK 47
>SB_8638| Best HMM Match : PP2C (HMM E-Value=6.5e-32)
Length = 905
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 301 HTPPYLTAKPDLYYHRLSTRDKFLILASDGLWDMMTPLQAVKLVGEHM 348
H + +P + L D+F+ILA++G+W++ + + + L+ + M
Sbjct: 728 HLKSSVICQPSVNCVTLDEADQFVILATNGVWEVFSEEEVILLLEDLM 775
>SB_47923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 29.1 bits (62), Expect = 7.6
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 65 MGVFDGHGGPACAQVISKRLVDYIAAALLPIETLHKYIQQDPREALVDTFNNRVEILQEL 124
+G F+ +GG +I K L+DY LP+E H I+Q L D R +I +L
Sbjct: 232 LGSFNSNGGFWHTTLIEKHLIDYF-VPFLPLERAH--IKQCALVDLQDKGRKREDITDDL 288
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.137 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,283,334
Number of Sequences: 59808
Number of extensions: 649283
Number of successful extensions: 1487
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1440
Number of HSP's gapped (non-prelim): 48
length of query: 445
length of database: 16,821,457
effective HSP length: 84
effective length of query: 361
effective length of database: 11,797,585
effective search space: 4258928185
effective search space used: 4258928185
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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