GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000517-TA|BGIBMGA000517-PA|IPR013069|BTB/POZ,
IPR000210|BTB
         (1812 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    29   1.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    28   2.6  
DQ080879-1|AAY89525.1|  120|Anopheles gambiae olfactory receptor...    27   4.5  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    27   4.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   5.9  
DQ080906-1|AAY89552.1|  120|Anopheles gambiae olfactory receptor...    26   7.8  
DQ080904-1|AAY89550.1|  120|Anopheles gambiae olfactory receptor...    26   7.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   7.8  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 651  FEYSPIVSGGASVEDFPPQMPGSKTGSPSTKRKIENIPIVSGGYIPERTEEVNQVT 706
            F+  P +  GA +  F    PG +   PS K  IE++P+V   ++P +  +  +VT
Sbjct: 1735 FQVWPRMEEGAHLS-FKVPPPGIEFTLPSPKIGIESLPVVDPPWMPRQQNKDMEVT 1789


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 561 MTPITEDSLCTKAFVEPTQVEETVDDKQSNLDSISKETICLQETFMTSTPNNSIMSVKDS 620
           + P++ D+      V+   V   +D  +   D+I +  +C ++          ++   D+
Sbjct: 249 LMPLSTDANLFSQEVQRANVSGNLDAPEGGFDAIMQAIVCREQIGWREKARRLLLFSTDA 308

Query: 621 GFHGYSED 628
           GFH Y+ D
Sbjct: 309 GFH-YAGD 315


>DQ080879-1|AAY89525.1|  120|Anopheles gambiae olfactory receptor 38
           protein.
          Length = 120

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 89  DCSISSYPEKAISEITGSSPSTELTKEYYALVPIADNLL 127
           DC I  +  K +  I G  P   LT+ +Y  V IA NL+
Sbjct: 18  DCGIFKFQRKILL-IFGCWPPDRLTRRWYVKVLIAVNLI 55


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 243  SPDSLIADDPSS-SSDYLSATFTCSPVASC--TGCHTHLNVYDSNPK--MDNIITISDSG 297
            +PD  +   P   ++ Y      CS  A    T  H     +   P+    N+I+  ++G
Sbjct: 1848 TPDQCVMRKPEYFAASYALTGMNCSGPAQAYFTEYHQKAQQHCVKPQYYFGNVISEQEAG 1907

Query: 298  MENTGMLESLSSHKDVTLTDISLTESTLHDSVADEASNSNDSAHSP----LLERRDFLKL 353
             +          +KD  L+D S +ES+     +D++++S+     P      E++ + + 
Sbjct: 1908 RQRYNYY-----YKDFDLSDSSSSESSSSSDESDDSNSSSSEERKPNREHFFEKQQYTEK 1962

Query: 354  QC 355
            +C
Sbjct: 1963 EC 1964


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 13/43 (30%), Positives = 25/43 (58%)

Query: 39  SDIYTECDIQEQEKEIISYLSKQVTKLESLADCVNKTKIDLEE 81
           S+I  +  I+E  K+I S  ++ + + E L D +  +++ LEE
Sbjct: 419 SEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEE 461


>DQ080906-1|AAY89552.1|  120|Anopheles gambiae olfactory receptor 38
           protein.
          Length = 120

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 89  DCSISSYPEKAISEITGSSPSTELTKEYYALVPIADNLL 127
           DC +  +  K +  I G  P   LT+ +Y  V IA NL+
Sbjct: 18  DCGMFKFQRKILL-IFGCWPPDRLTRRWYVKVRIAVNLI 55


>DQ080904-1|AAY89550.1|  120|Anopheles gambiae olfactory receptor 38
           protein.
          Length = 120

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 89  DCSISSYPEKAISEITGSSPSTELTKEYYALVPIADNLL 127
           DC +  +  K +  I G  P   LT+ +Y  V IA NL+
Sbjct: 18  DCGMFKFQRKILL-IFGCWPPDRLTRRWYVKVRIAVNLI 55


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 16/61 (26%), Positives = 37/61 (60%), Gaps = 8/61 (13%)

Query: 699 TEEVNQVTRSKVKLSSSSAWVVDMSG-GAKLNSETSNVSQTSK--RPNEKTCENLKVALN 755
           TE++N++T SKVK+  +      ++G G +++  ++N+S+ +   + +E+  +  K  +N
Sbjct: 884 TEQINEITNSKVKVLQTK-----INGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKIN 938

Query: 756 S 756
           S
Sbjct: 939 S 939


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.126    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,626,092
Number of Sequences: 2123
Number of extensions: 60423
Number of successful extensions: 177
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 167
Number of HSP's gapped (non-prelim): 15
length of query: 1812
length of database: 516,269
effective HSP length: 74
effective length of query: 1738
effective length of database: 359,167
effective search space: 624232246
effective search space used: 624232246
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)