Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000516-TA|BGIBMGA000516-PA|IPR004088|KH, type 1,
IPR004087|KH
(472 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53788| Best HMM Match : KH_1 (HMM E-Value=0) 66 4e-11
SB_35585| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_6248| Best HMM Match : KH_1 (HMM E-Value=1.6e-41) 45 2e-04
SB_3277| Best HMM Match : KH_1 (HMM E-Value=4.3e-30) 42 0.001
SB_21167| Best HMM Match : KH_1 (HMM E-Value=0) 40 0.003
SB_16551| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.010
SB_20777| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.017
SB_24937| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.040
SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.053
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 34 0.28
SB_24945| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.50
SB_25863| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.50
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_25844| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.5
SB_36852| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09) 30 4.6
SB_6146| Best HMM Match : KH_1 (HMM E-Value=1.4e-05) 29 6.1
SB_18548| Best HMM Match : Peptidase_A17 (HMM E-Value=1.6e-18) 29 6.1
SB_11910| Best HMM Match : Kelch_1 (HMM E-Value=0) 29 8.1
>SB_53788| Best HMM Match : KH_1 (HMM E-Value=0)
Length = 356
Score = 66.5 bits (155), Expect = 4e-11
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 81 LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNV--GSLEKAITIYGNPENCTN 138
L++LV + G+IIG+ G I + Q + AR+ + + G+ E+ I G EN
Sbjct: 14 LKILVPNYAAGSIIGKGGQNIAQVQQTTGARIKLSPNNQYYPGTQERIGLIMGEVENIVQ 73
Query: 139 ACKRILEVMQQEANNTNKGEIC---------LKILAHNNLIGRIIGKGGNTIKRIMQETD 189
+++ ++QE +KI+ N+ G IIGK G+ IK I ++T
Sbjct: 74 MLDFVIDKIRQEPQGIKASMSISFDRERAKQMKIIVPNSTAGMIIGKAGSAIKSISEQTG 133
Query: 190 TKITVSSINDINSFNLERIITVKGSIENMAKAESQISAKLRQSYENDLQVLAPQSIMFPG 249
+I +S D S ERI+ V GS E + A I++K+ + E+ L +IM+ G
Sbjct: 134 ARIQISQ-KDAESVAGERIVCVGGSPEQVTAACVIITSKVPEDPEHALY----NNIMYSG 188
Query: 250 L 250
L
Sbjct: 189 L 189
Score = 44.0 bits (99), Expect = 3e-04
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 295 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLXXXXXXXXXXXXXXRKVTIVGSPEA 354
+ +PN A G+IIG G +I + + + A +K++P R I+G E
Sbjct: 16 ILVPNYAAGSIIGKGGQNIAQVQQTTGARIKLSP-----NNQYYPGTQERIGLIMGEVEN 70
Query: 355 QWKAQYLIFEKMREE-----GFMSGSDDVRLI--VEIVVASSQVGRIIGKGGQNVRELQR 407
+ + +K+R+E MS S D ++I+V +S G IIGK G ++ +
Sbjct: 71 IVQMLDFVIDKIRQEPQGIKASMSISFDRERAKQMKIIVPNSTAGMIIGKAGSAIKSISE 130
Query: 408 VTGSLIKL 415
TG+ I++
Sbjct: 131 QTGARIQI 138
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 381 IVEIVVASSQVGRIIGKGGQNVRELQRVTGSLIKL 415
I++I+V + G IIGKGGQN+ ++Q+ TG+ IKL
Sbjct: 13 ILKILVPNYAAGSIIGKGGQNIAQVQQTTGARIKL 47
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 161 LKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGSIENMAK 220
L+I + LIG I+GKGG TI MQ + +I VS + R + + G +
Sbjct: 274 LEITVPDELIGAILGKGGKTITEFMQYSGARIQVSQKGEFVPGTSNRKVVITGDVPAAQL 333
Query: 221 AESQISAKLRQ 231
A ++ +++Q
Sbjct: 334 AHFLVTQRIQQ 344
Score = 35.1 bits (77), Expect = 0.12
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 81 LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNV--GSLEKAITIYGN 132
L + V +++GAI+G+ G TI Q S AR+ V +K G+ + + I G+
Sbjct: 274 LEITVPDELIGAILGKGGKTITEFMQYSGARIQVSQKGEFVPGTSNRKVVITGD 327
Score = 34.3 bits (75), Expect = 0.22
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 289 SQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLXXXXXXXXXXXXXXRKVTI 348
S T + +P+ +GAI+G G I +++S A ++++ RKV I
Sbjct: 270 SSATLEITVPDELIGAILGKGGKTITEFMQYSGARIQVS-----QKGEFVPGTSNRKVVI 324
Query: 349 VGSPEAQWKAQYLIFEKMRE 368
G A A +L+ +++++
Sbjct: 325 TGDVPAAQLAHFLVTQRIQQ 344
Score = 32.3 bits (70), Expect = 0.87
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 295 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLXXXXXXXXXXXXXXRKVTIVGSPEA 354
+ +PN+ G IIG GS I++I + A ++I+ R V + GSPE
Sbjct: 107 IIVPNSTAGMIIGKAGSAIKSISEQTGARIQIS------QKDAESVAGERIVCVGGSPEQ 160
Query: 355 QWKAQYLIFEKMREE 369
A +I K+ E+
Sbjct: 161 VTAACVIITSKVPED 175
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 382 VEIVVASSQVGRIIGKGGQNVRELQRVTGSLIKL 415
+EI V +G I+GKGG+ + E + +G+ I++
Sbjct: 274 LEITVPDELIGAILGKGGKTITEFMQYSGARIQV 307
>SB_35585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 48.4 bits (110), Expect = 1e-05
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 161 LKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGSIENMAK 220
L+I +++G +IGKGG TIKRI E+ ++ + D N + +R+ TV+GS E + K
Sbjct: 215 LEIPVPRDVVGFVIGKGGETIKRIQAESGARVQFNPAKD-NPNSSDRMATVQGSQEQIQK 273
Query: 221 AESQISAKLRQ 231
E I+ + Q
Sbjct: 274 VEKIINEIISQ 284
Score = 46.8 bits (106), Expect = 4e-05
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 77 TDFPLRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVH-RKDNVGSLEKAITIYGNPEN 135
T+ L + V D+VG +IG+ G TI+ I +S ARV + KDN S ++ T+ G+ E
Sbjct: 211 TEKELEIPVPRDVVGFVIGKGGETIKRIQAESGARVQFNPAKDNPNSSDRMATVQGSQEQ 270
Query: 136 CTNACKRILEVMQQ 149
K I E++ Q
Sbjct: 271 IQKVEKIINEIISQ 284
Score = 36.7 bits (81), Expect = 0.040
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 161 LKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGSIENMAK 220
L++ N G IIGKGG TIK+I+ + + ++ ++ N + ++G+ + + +
Sbjct: 328 LEMPVPGNKCGLIIGKGGETIKQIIAVSGAHVELN--RNVPENNPTKFFVIRGTDQQIQQ 385
Query: 221 AESQISAKL 229
AE I+ K+
Sbjct: 386 AEKMINEKI 394
Score = 34.3 bits (75), Expect = 0.22
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 81 LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNAC 140
L + V + G IIG+ G TI+ I S A V+++R + K I G + A
Sbjct: 328 LEMPVPGNKCGLIIGKGGETIKQIIAVSGAHVELNRNVPENNPTKFFVIRGTDQQIQQAE 387
Query: 141 KRILEVMQQEANNTNKG 157
K I E + + +G
Sbjct: 388 KMINEKISDQRGGQGRG 404
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/34 (35%), Positives = 25/34 (73%)
Query: 382 VEIVVASSQVGRIIGKGGQNVRELQRVTGSLIKL 415
+E+ V ++ G IIGKGG+ ++++ V+G+ ++L
Sbjct: 328 LEMPVPGNKCGLIIGKGGETIKQIIAVSGAHVEL 361
Score = 30.7 bits (66), Expect = 2.7
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 382 VEIVVASSQVGRIIGKGGQNVRELQRVTGSLIK 414
+EI V VG +IGKGG+ ++ +Q +G+ ++
Sbjct: 215 LEIPVPRDVVGFVIGKGGETIKRIQAESGARVQ 247
>SB_6248| Best HMM Match : KH_1 (HMM E-Value=1.6e-41)
Length = 487
Score = 44.8 bits (101), Expect = 2e-04
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 81 LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNAC 140
LR+L+QS G IIG+ G+ IR + + A V+V + S E+ +TI ++ +
Sbjct: 55 LRILIQSKDAGGIIGKGGTNIRRLRTEYNAVVNV---PDTNSNERVLTITAPRQSALD-- 109
Query: 141 KRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDI 200
IL + + G +++L + +G IIG+ G IK I + + + V + ++
Sbjct: 110 --ILAEVVPKIGEVQYGHE-IQMLVQRSQVGSIIGRAGYKIKEIREASSAETIVKCVENV 166
Score = 39.5 bits (88), Expect = 0.006
Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 147 MQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLE 206
M++ ++ + L+IL + G IIGKGG I+R+ E + + V N + E
Sbjct: 41 MRESSDVDSNAPTTLRILIQSKDAGGIIGKGGTNIRRLRTEYNAVVNVPDTN-----SNE 95
Query: 207 RIITVKGSIENMAKAESQISAKLRQ-SYENDLQVLAPQS 244
R++T+ ++ +++ K+ + Y +++Q+L +S
Sbjct: 96 RVLTITAPRQSALDILAEVVPKIGEVQYGHEIQMLVQRS 134
Score = 33.1 bits (72), Expect = 0.50
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 82 RLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPE 134
++ + D+ G+IIG+ G I++I + A + + GS ++ ITI GN E
Sbjct: 324 QVTIPKDLAGSIIGKGGERIKMIRNRCNAVIKID-DPLPGSNDRIITITGNQE 375
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 152 NNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITV 211
N + ++ +L G IIGKGG IK I + V I+D + +RIIT+
Sbjct: 314 NTAGGDQTSTQVTIPKDLAGSIIGKGGERIKMIRNRCN---AVIKIDDPLPGSNDRIITI 370
Query: 212 KGSIENM 218
G+ E +
Sbjct: 371 TGNQEQI 377
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 364 EKMREEGFMSGSDDVRLIVEIVVASSQVGRIIGKGGQNVRELQRVTGSLIKL 415
++MRE + + L I++ S G IIGKGG N+R L+ +++ +
Sbjct: 39 KRMRESSDVDSNAPTTL--RILIQSKDAGGIIGKGGTNIRRLRTEYNAVVNV 88
Score = 29.9 bits (64), Expect = 4.6
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 17/120 (14%)
Query: 292 TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLXXXXXXXXXXXXXXRKVTIVGS 351
T + I + G IIG G++IR + NA V + +V + +
Sbjct: 54 TLRILIQSKDAGGIIGKGGTNIRRLRTEYNAVVNVPD-----------TNSNERVLTITA 102
Query: 352 PEAQWKAQYLIFEKMREEGFMSGSDDVRLIVEIVVASSQVGRIIGKGGQNVRELQRVTGS 411
P A ++ E + + G + +++++V+ SQVG IIG+ G ++E++ + +
Sbjct: 103 PRQS--ALDILAEVVPKIGEVQYGHEIQMLVQ----RSQVGSIIGRAGYKIKEIREASSA 156
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 290 QETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI 326
Q +T + IP + G+IIG G I+ I NA +KI
Sbjct: 320 QTSTQVTIPKDLAGSIIGKGGERIKMIRNRCNAVIKI 356
>SB_3277| Best HMM Match : KH_1 (HMM E-Value=4.3e-30)
Length = 379
Score = 41.9 bits (94), Expect = 0.001
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 344 RKVTIVGSPEAQWKAQYLIFEKMREEGFMSGSDDVR--LIVEIVVASSQVGRIIGKGGQN 401
R V++ G+ +A A LI +K+ +E + + + + ++V SQ G IIGKGG
Sbjct: 51 RIVSVTGTKDAVVTAFALIGQKLEDELKSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAK 110
Query: 402 VRELQRVTGSLI 413
++E++ V+G+ +
Sbjct: 111 IKEIREVSGASV 122
Score = 39.5 bits (88), Expect = 0.006
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 297 IPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLXXXXXXXXXXXXXXRKVTIVGSPEAQW 356
I AVG+IIG KGS+I I + S AS+KI R+V I G+ EA
Sbjct: 198 ILKGAVGSIIGQKGSYITGIRQMSGASIKIG--------DSENGDDKREVLITGTAEAVG 249
Query: 357 KAQYLIFEKMREE 369
AQ+LI + +E
Sbjct: 250 LAQFLINARNEDE 262
Score = 33.9 bits (74), Expect = 0.28
Identities = 20/102 (19%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 95 GRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNACKRILEVMQQEANNT 154
G + + + Q ++ ++ D + E+ +++ G + A I + ++ E +
Sbjct: 22 GHSSNLVLKMIMQGKSNAHINISDG-STPERIVSVTGTKDAVVTAFALIGQKLEDELKSN 80
Query: 155 NKGE----ICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKI 192
+K + L+++ + G IIGKGG IK I + + +
Sbjct: 81 SKSNTTPPVTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASV 122
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 292 TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAP 328
T L +P + G+IIG G+ I+ I S ASV P
Sbjct: 90 TLRLIVPGSQCGSIIGKGGAKIKEIREVSGASVVFPP 126
Score = 29.5 bits (63), Expect = 6.1
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 90 VGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPE 134
VG+IIG++GS I I Q S A + + +N G ++ + I G E
Sbjct: 203 VGSIIGQKGSYITGIRQMSGASIKIGDSEN-GDDKREVLITGTAE 246
>SB_21167| Best HMM Match : KH_1 (HMM E-Value=0)
Length = 1650
Score = 40.3 bits (90), Expect = 0.003
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 10/166 (6%)
Query: 81 LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNAC 140
L + + S +IIG +G IR + + V + GS + I G ++ A
Sbjct: 662 LEVHIPSKFHNSIIGAKGRLIRSVMEDCGG-VSIKFPPE-GSNSDKVLIRGPKDDVEKAK 719
Query: 141 KRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDI 200
K++LE+ ++ + EI K H LIGR GG +I+++ + T +I + D
Sbjct: 720 KQLLELTNEKELGSYTVEIRAKPEHHRFLIGR----GGASIRKVRENTGARIVFPAAKDE 775
Query: 201 NSFNLERIITVKGSIENMAKAESQISAKLRQSYENDLQVLAPQSIM 246
+ + +IT+ G E + A+ ++ ++ + A Q +M
Sbjct: 776 D----KELITIIGKQEAVEAAKDELLKSIKDLGAKECVEGARQRVM 817
Score = 39.9 bits (89), Expect = 0.004
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 149 QEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITV---SSINDINSFN- 204
Q +N C+ + +IG+GG TIK+I +ETDTKI + S +D+
Sbjct: 578 QASNEMVAANYCIDVPIFKQFHKNVIGRGGTTIKKIREETDTKIELPAEGSDSDVIIITG 637
Query: 205 --------LERIITVKGSIENMAKAESQISAKLRQS 232
E+I+ ++ + N+ + E I +K S
Sbjct: 638 HKAQVEAAREKILAIQNELANVTQLEVHIPSKFHNS 673
Score = 39.5 bits (88), Expect = 0.006
Identities = 34/133 (25%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 93 IIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNACKRILEVMQQEAN 152
+IGR G+TI+ I +++ ++++ + GS I I G+ A ++IL + Q E
Sbjct: 602 VIGRGGTTIKKIREETDTKIELPAE---GSDSDVIIITGHKAQVEAAREKILAI-QNELA 657
Query: 153 NTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVK 212
N + E+ + HN+ IIG G I+ +M++ VS N ++++ ++
Sbjct: 658 NVTQLEVHIPSKFHNS----IIGAKGRLIRSVMEDCG---GVSIKFPPEGSNSDKVL-IR 709
Query: 213 GSIENMAKAESQI 225
G +++ KA+ Q+
Sbjct: 710 GPKDDVEKAKKQL 722
Score = 32.3 bits (70), Expect = 0.87
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 96 RQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNACKRILEVMQQEANNTN 155
RQ S R I ++ A ++V + L I + G P+ A + +L +Q +A
Sbjct: 143 RQHSICRDIMAKTGASIEVSLGKD---LSLTIMVTGKPDTVAKARRLVLSQLQTQA---- 195
Query: 156 KGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITV 194
+I ++I ++ I+GKGG T++ + T TKIT+
Sbjct: 196 --QIEIQIPREHHKF--ILGKGGKTLQTMELSTATKITM 230
Score = 31.5 bits (68), Expect = 1.5
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 12/147 (8%)
Query: 82 RLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNACK 141
RL + I G T I +Q+ A +++ +V E +T+ G + A
Sbjct: 268 RLAIPKTFHPFISGPNNETANRIKEQTGAAINIP-PPSVNKDE--LTVAGEKDGVAQAKA 324
Query: 142 RILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDIN 201
ILE+ + + T I ++ H I+G G TI I++ T + + +D +
Sbjct: 325 MILEIYEDKKRKTTTVSIEVRKSQHK----YIVGPRGGTIHEILELTGVSVEMPP-SDSD 379
Query: 202 SFNLERIITVKGSIENMAKAESQISAK 228
S IT++G + + A +Q+ K
Sbjct: 380 S----ETITLRGEQDKLGVALTQVYEK 402
Score = 30.3 bits (65), Expect = 3.5
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 295 LYIPNNAVGAIIGTKGSHIRNIIR-FSNASVKIAPLXXXXXXXXXXXXXXRKVTIVGSPE 353
++IP+ +IIG KG IR+++ S+K P KV I G +
Sbjct: 664 VHIPSKFHNSIIGAKGRLIRSVMEDCGGVSIKFPP----------EGSNSDKVLIRGPKD 713
Query: 354 AQWKAQYLIFEKMREEGFMSGSDDVRLIVEIVVASSQVGRIIGKGGQNVRELQRVTGSLI 413
KA+ + E E+ S + VEI +IG+GG ++R+++ TG+ I
Sbjct: 714 DVEKAKKQLLELTNEKELGSYT------VEIRAKPEHHRFLIGRGGASIRKVRENTGARI 767
>SB_16551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 38.7 bits (86), Expect = 0.010
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 80 PLRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNA 139
P + ++ +G +IG+ G+ I I Q++ A++ V KD KA I G + A
Sbjct: 297 PETVELKESQIGMVIGKGGNRINSIGQETGAKIYV--KDC-----KA-HIMGTKNQKSRA 348
Query: 140 CKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKIT 193
IL ++ + + G + +L+GR+ GK G KRI ++T+T I+
Sbjct: 349 KYHILRLLAEPVVSKRTG-----VYISKDLVGRVFGKSGEKKKRISEQTNTFIS 397
Score = 35.5 bits (78), Expect = 0.093
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 90 VGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNACKRILEVMQQ 149
+ A+IG++ + I + + R ++ S + + + G+ E+ A I+++++
Sbjct: 244 IAAVIGKKKKNLEYIEKMTNIR------PSIDSDQDCVILEGSAEDVQKAEHIIMDMIEP 297
Query: 150 EANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITV 194
E + +I G +IGKGGN I I QET KI V
Sbjct: 298 ETVELKESQI-----------GMVIGKGGNRINSIGQETGAKIYV 331
Score = 29.9 bits (64), Expect = 4.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 384 IVVASSQVGRIIGKGGQNVRELQRVTGSLI 413
+ + SQ+G +IGKGG + + + TG+ I
Sbjct: 300 VELKESQIGMVIGKGGNRINSIGQETGAKI 329
>SB_20777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 37.9 bits (84), Expect = 0.017
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 149 QEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQET 188
+EA+ + E+ ++++ H++ GRIIG+ GN +K +M ET
Sbjct: 58 KEADYSISNEVEMRLVIHDSHAGRIIGRKGNNLKSVMDET 97
Score = 29.1 bits (62), Expect = 8.1
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 368 EEGFMSGSDDVRLIVEIVVASSQVGRIIGKGGQNVRELQRVTGS 411
+E S S++V + +V+ S GRIIG+ G N++ + TG+
Sbjct: 58 KEADYSISNEVEM--RLVIHDSHAGRIIGRKGNNLKSVMDETGA 99
>SB_24937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 36.7 bits (81), Expect = 0.040
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 127 ITIYGNPENCTNACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQ 186
I + G P++ A ++++ V+ +T + LK+ + IIGKGG IK++MQ
Sbjct: 315 IKVAGLPDSVRMAKEKVMAVL-----DTKSSRVTLKMDVSHTDHSHIIGKGGYNIKKVMQ 369
Query: 187 ETDTKITVSSINDINSFNLERIITVKGSIENMAKAESQISAKL 229
+T I N +S +++ G + A I L
Sbjct: 370 DTGCHIHFPDSNRGSSSEKSNQVSIAGQPLGVESARLHIREML 412
Score = 32.3 bits (70), Expect = 0.87
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 173 IIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGSIENMAKAESQI 225
IIGK G IK I Q+T + + D N + ++ + GS+E++ A +Q+
Sbjct: 484 IIGKNGANIKHITQQTGASV---NFPDPNGTQRKGVVFLSGSVESVICARAQL 533
Score = 31.9 bits (69), Expect = 1.1
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 365 KMREEGFMSGSD--DVRLIVEIVVASSQVGRIIGKGGQNVRELQRVTGSLIKLXXXXXXX 422
+M +E M+ D R+ +++ V+ + IIGKGG N++++ + TG I
Sbjct: 325 RMAKEKVMAVLDTKSSRVTLKMDVSHTDHSHIIGKGGYNIKKVMQDTGCHIHF---PDSN 381
Query: 423 XXXXXXHETTVHIVGPFYSVQSAQRRIRAMV 453
V I G V+SA+ IR M+
Sbjct: 382 RGSSSEKSNQVSIAGQPLGVESARLHIREML 412
>SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 36.3 bits (80), Expect = 0.053
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 158 EICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSIND-------INSFNLERIIT 210
E L++ ++ G IIG+GG IK+I +ET T I ++ N ER I
Sbjct: 55 ETSLELKVPASVSGVIIGRGGANIKKIQKETGTYINFKDDDEPKEKDFGANRTPSERTIV 114
Query: 211 VKGSIENMAKAE 222
+KG E KAE
Sbjct: 115 IKGEREKARKAE 126
Score = 34.7 bits (76), Expect = 0.16
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Query: 81 LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKD---------NVGSLEKAITIYG 131
L L V + + G IIGR G+ I+ I +++ ++ D N E+ I I G
Sbjct: 58 LELKVPASVSGVIIGRGGANIKKIQKETGTYINFKDDDEPKEKDFGANRTPSERTIVIKG 117
Query: 132 NPENCTNACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQ 186
E A I +++ ++ + + L G+IIG+GG TI+ + Q
Sbjct: 118 EREKARKAELIIKKIVAEQPRQLTE-----EYLIPQAACGKIIGRGGATIRHLCQ 167
Score = 33.9 bits (74), Expect = 0.28
Identities = 14/32 (43%), Positives = 24/32 (75%)
Query: 382 VEIVVASSQVGRIIGKGGQNVRELQRVTGSLI 413
+E+ V +S G IIG+GG N++++Q+ TG+ I
Sbjct: 58 LELKVPASVSGVIIGRGGANIKKIQKETGTYI 89
Score = 33.9 bits (74), Expect = 0.28
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 295 LYIPNNAVGAIIGTKGSHIRNIIRFSNASV--KIAPLXXXXXXXXXXXXXXRKVTIVGSP 352
L +P + G IIG G++I+ I + + + K R + I G
Sbjct: 60 LKVPASVSGVIIGRGGANIKKIQKETGTYINFKDDDEPKEKDFGANRTPSERTIVIKGER 119
Query: 353 EAQWKAQYLIFEKMREEGFMSGSDDVRLIVEIVVASSQVGRIIGKGGQNVRELQRVT 409
E KA+ +I + + E+ +L E ++ + G+IIG+GG +R L +V+
Sbjct: 120 EKARKAELIIKKIVAEQ-------PRQLTEEYLIPQAACGKIIGRGGATIRHLCQVS 169
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 33.9 bits (74), Expect = 0.28
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 365 KMREEGFMSGSDDVRLIVEIVVASSQVGRIIGKGGQNVRELQRVTGSLIKLXXXXXXXXX 424
K EEG+ + VR ++ V+SS V RIIG+ G NV ++ TG+ I +
Sbjct: 898 KRHEEGW---KEVVRRSKKMSVSSSVVSRIIGRAGCNVNAIRETTGAHIDIDTSRQKSTG 954
Query: 425 XXXXHETTVHIVGPFYSVQSAQRRIRAMV 453
+ I GP + + A I A++
Sbjct: 955 -----SCIITIKGPADATRQAHHLISALI 978
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 82 RLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNACK 141
++ V S +V IIGR G + I + + A +D+ + ITI G P + T
Sbjct: 913 KMSVSSSVVSRIIGRAGCNVNAIRETTGAHIDIDTSRQKSTGSCIITIKG-PADATRQAH 971
Query: 142 RILEVM 147
++ +
Sbjct: 972 HLISAL 977
>SB_24945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 33.1 bits (72), Expect = 0.50
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 168 NLIGRIIGKGGNTIKRIMQETDTKITV 194
N +G+++G GNT KR+ T TK+++
Sbjct: 116 NFVGKLLGPRGNTFKRLQNSTGTKMSI 142
>SB_25863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 813
Score = 33.1 bits (72), Expect = 0.50
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 93 IIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNACKRILEVMQQEAN 152
+IG G +I I QS AR+ + +KA I G E + A I +++ ++
Sbjct: 410 VIGEGGRSINSIRSQSGARIQIKE-------DKAY-IRGTQEQKSKAKDLINKLLTSVSS 461
Query: 153 NTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFN 204
T C+ I H L +IGK G IK + Q+T T + + N+I N
Sbjct: 462 GT-----CVFIPEH--LARHVIGKHGQRIKDLKQKTKTDMYYNKENNILCIN 506
Score = 29.5 bits (63), Expect = 6.1
Identities = 34/167 (20%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 79 FPLRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTN 138
F + + +G +IG++G + I ++R R + + S I + G+ +
Sbjct: 329 FTREIFIPEHAMGMVIGKKGRMLEEIKHKTRVRPIIDK-----SRHGCIILQGSRTDVQK 383
Query: 139 ACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSIN 198
A KR++E + + +++ R+IG+GG +I I ++ +I +
Sbjct: 384 A-KRMIEDIVESIQQP-------EVIPLGAKTSRVIGEGGRSINSIRSQSGARIQIK--- 432
Query: 199 DINSFNLERIITVKGSIENMAKAESQISAKLRQSYENDLQVLAPQSI 245
E ++G+ E +KA+ I+ KL S + V P+ +
Sbjct: 433 -------EDKAYIRGTQEQKSKAKDLIN-KLLTSVSSGTCVFIPEHL 471
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 168 NLIGRIIGKGGNTIKRIMQETDTKITV 194
N IG +IG GNT+K + +ET+ KI +
Sbjct: 116 NFIGLLIGPRGNTLKNMEKETNAKIMI 142
>SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1125
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 189 DTKITVSSINDINSFNLERIITVKGSIENMAKAESQISAKLRQ 231
DTKI+ SI+ FN++ ++ I+N+AK SQ LRQ
Sbjct: 55 DTKISRVSISKSLGFNIDERLSWSSHIDNIAKRVSQAIGGLRQ 97
>SB_25844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 128 TIYGNPENCTNACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGG 178
++YGN + E+ + N+ K E+ L+ HNN+ RI G+GG
Sbjct: 264 SLYGNKSGNPPDVVAVHELNRVPGNDFTKFEMVLRDTLHNNMHCRIGGRGG 314
>SB_36852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 29.9 bits (64), Expect = 4.6
Identities = 21/97 (21%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 104 ITQQSRARVDVHRKDNVGSLEKAITIYGNPENCTNACKRILEVMQQEANNTNKGEICLKI 163
+T + VDV ++ + +KA+++ + ++ T A R+LE++ E T E+
Sbjct: 50 LTGPEKVGVDVLQRTK-STPKKAVSLISDMQHVTGATDRLLEML--ETVITYVEEVLAGS 106
Query: 164 LAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDI 200
+ +N++GR + N++ ++ E + S++ D+
Sbjct: 107 VPADNVVGRDLTSFVNSVPKMTAEEFEAMLNSNMQDL 143
>SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09)
Length = 1472
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 154 TNKGEICLKILAHNNLIGRIIGKGGNTIKRI 184
TN + +++ A N L GR+IG+GG+ I I
Sbjct: 515 TNAKTMVVQLTAPNALCGRVIGRGGSKINSI 545
>SB_6146| Best HMM Match : KH_1 (HMM E-Value=1.4e-05)
Length = 148
Score = 29.5 bits (63), Expect = 6.1
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Query: 295 LYIPNNAVGAIIGTKGSHIRNIIRFSNAS-VKIAPLXXXXXXXXXXXXXXRKVTIVGSPE 353
L IP GA+IGTKGS + S AS V ++P R V ++G P
Sbjct: 94 LAIPQKYAGAVIGTKGSFCNYMKTLSGASRVHVSP---------DDKSGERYVEVIGHPM 144
Query: 354 AQW 356
AQ+
Sbjct: 145 AQY 147
>SB_18548| Best HMM Match : Peptidase_A17 (HMM E-Value=1.6e-18)
Length = 550
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 193 TVSSINDINSFNLERIITVKG---SIENMAKAESQISAKLRQSYENDLQV 239
TVS + I SF+L+ ++T + ++A AE + L Q + DL+V
Sbjct: 210 TVSGVVGIESFSLDGLVTTSAIPVNKSHIASAEEHLEGVLLQEFGEDLEV 259
>SB_11910| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 456
Score = 29.1 bits (62), Expect = 8.1
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 153 NTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVK 212
N N G CL + N+LI + G+ N+I+ ++ + V ++N +F + R I
Sbjct: 370 NMNNGRRCLGVAVVNDLIYVVGGRVANSIEYYDKDQNEWTVVGAVNTRCNFGVLRYI--- 426
Query: 213 GSIENMAKAESQISAK 228
I N + ++ A+
Sbjct: 427 AGISNRVRDRDRLFAR 442
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.135 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,460,591
Number of Sequences: 59808
Number of extensions: 381408
Number of successful extensions: 847
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 755
Number of HSP's gapped (non-prelim): 91
length of query: 472
length of database: 16,821,457
effective HSP length: 85
effective length of query: 387
effective length of database: 11,737,777
effective search space: 4542519699
effective search space used: 4542519699
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -