GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000514-TA|BGIBMGA000514-PA|undefined
         (118 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   0.60 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   7.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   7.3  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    20   7.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    20   7.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      19   9.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      19   9.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    19   9.7  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 0.60
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 5   PNMPPAVDRNLKPRPSSHNMS 25
           P   PA+  NL PRP S++ S
Sbjct: 84  PAKDPAIYSNLLPRPGSNDNS 104


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 2   PTMPNMPPA 10
           PT+P +PPA
Sbjct: 209 PTVPKIPPA 217


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 12  DRNLKPRPSSHNMSQISHISGQP 34
           + NL    + H++SQ  HI   P
Sbjct: 465 EENLALTSTEHSLSQSQHIQKIP 487


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 12  DRNLKPRPSSHNMSQISHISGQP 34
           + NL    + H++SQ  HI   P
Sbjct: 290 EENLALTSTEHSLSQSQHIQKIP 312


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 2   PTMPNMPPA 10
           PT+P +PPA
Sbjct: 209 PTVPKIPPA 217


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 10  AVDRNLKPRPSSHNMSQISHISGQPH 35
           A D  L P P  H+    + +   PH
Sbjct: 730 AFDVKLPPPPHPHHQPPRNPVGTNPH 755


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 10  AVDRNLKPRPSSHNMSQISHISGQPH 35
           A D  L P P  H+    + +   PH
Sbjct: 622 AFDVKLPPPPHPHHQPPRNPVGTNPH 647


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 7/31 (22%), Positives = 18/31 (58%)

Query: 83  SDSETPYKTVDFLKTEAFNITRQDAEASRNL 113
           ++S  P + +  + +E +N+  ++ E  RN+
Sbjct: 309 AESRKPIRILFDVSSEIYNVEYKNVEFWRNI 339


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.128    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,929
Number of Sequences: 317
Number of extensions: 1101
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 118
length of database: 114,650
effective HSP length: 50
effective length of query: 68
effective length of database: 98,800
effective search space:  6718400
effective search space used:  6718400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)
S2: 38 (19.4 bits)