GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000513-TA|BGIBMGA000513-PA|IPR001849|Pleckstrin-like
         (164 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   0.52 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   8.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   8.4  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.2 bits (55), Expect = 0.52
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 78   RASETT-GPYIPISECITGVRDQDDQRHGTGVGNHRSPLGRISENKTN-PKYLSQPQIRI 135
            +A  TT G YI  S C     D    +  TG G+     G   + K+N  +   Q Q+  
Sbjct: 1242 KAKRTTLGQYIR-SACSNHYGDHSSGKDPTGAGSSSGKGGGFFDRKSNHQQQQQQQQVPG 1300

Query: 136  TAAELSENESNPS 148
            +  E S + S P+
Sbjct: 1301 SGTECSASTSEPA 1313


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)

Query: 112 RSPLGRISENKTN 124
           R PLG IS NKT+
Sbjct: 733 RDPLGGISSNKTD 745


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query: 21  QTQTRTYHLEAECEAEMEKWVDVIC 45
           +T +  YH+    + E+E+  D +C
Sbjct: 422 ETSSEPYHIRPVTDLELERIADDMC 446


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.127    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,906
Number of Sequences: 2123
Number of extensions: 6869
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 4
length of query: 164
length of database: 516,269
effective HSP length: 59
effective length of query: 105
effective length of database: 391,012
effective search space: 41056260
effective search space used: 41056260
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 45 (22.2 bits)