Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000512-TA|BGIBMGA000512-PA|IPR000195|RabGAP/TBC
(613 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15930.1 68418.m01863 plant adhesion molecule 1 (PAM1) identi... 183 4e-46
At3g02460.1 68416.m00233 plant adhesion molecule, putative stron... 176 3e-44
At3g02460.2 68416.m00234 plant adhesion molecule, putative stron... 165 6e-41
At3g07890.1 68416.m00964 RabGAP/TBC domain-containing protein si... 120 2e-27
At2g37290.1 68415.m04574 RabGAP/TBC domain-containing protein lo... 110 2e-24
At2g39280.1 68415.m04823 RabGAP/TBC domain-containing protein co... 99 7e-21
At3g55020.1 68416.m06110 RabGAP/TBC domain-containing protein lo... 97 3e-20
At5g54780.1 68418.m06824 RabGAP/TBC domain-containing protein co... 72 1e-12
At2g30710.1 68415.m03746 RabGAP/TBC domain-containing protein si... 62 8e-10
At4g27100.1 68417.m03895 RabGAP/TBC domain-containing protein si... 60 4e-09
At5g52590.1 68418.m06530 RabGAP/TBC domain-containing protein co... 59 7e-09
At3g59570.1 68416.m06647 RabGAP/TBC domain-containing protein si... 58 2e-08
At5g53570.1 68418.m06656 RabGAP/TBC domain-containing protein si... 57 4e-08
At2g43490.1 68415.m05404 RabGAP/TBC domain-containing protein si... 56 7e-08
At5g41940.1 68418.m05106 RabGAP/TBC domain-containing protein si... 56 9e-08
At3g49350.1 68416.m05395 RabGAP/TBC domain-containing protein si... 55 2e-07
At5g24390.1 68418.m02875 RabGAP/TBC domain-containing protein si... 54 2e-07
At2g20440.1 68415.m02386 RabGAP/TBC domain-containing protein si... 54 4e-07
At4g28550.1 68417.m04084 RabGAP/TBC domain-containing protein si... 50 3e-06
At1g04830.1 68414.m00479 RabGAP/TBC domain-containing protein lo... 41 0.003
At4g13730.2 68417.m02131 RabGAP/TBC domain-containing protein lo... 36 0.10
At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein lo... 36 0.10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 35 0.14
At1g11400.2 68414.m01310 expressed protein 35 0.14
At1g11400.1 68414.m01309 expressed protein 35 0.14
At5g57210.1 68418.m07147 microtubule-associated protein-related ... 35 0.18
At3g24880.1 68416.m03120 expressed protein 34 0.32
At3g24870.1 68416.m03119 expressed protein 34 0.32
At2g21990.1 68415.m02612 expressed protein contains Pfam profile... 33 0.56
At2g19240.1 68415.m02246 RabGAP/TBC domain-containing protein lo... 32 0.97
At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyo... 32 1.3
At1g04500.1 68414.m00441 zinc finger CONSTANS-related similar to... 32 1.3
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 31 1.7
At3g09050.1 68416.m01064 expressed protein 31 1.7
At3g04030.1 68416.m00424 myb family transcription factor contain... 31 2.2
At5g64390.2 68418.m08088 KH domain-containing RNA-binding protei... 30 3.9
At5g64390.1 68418.m08089 KH domain-containing RNA-binding protei... 30 3.9
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 30 3.9
At4g29950.1 68417.m04260 microtubule-associated protein identica... 30 3.9
At3g10440.1 68416.m01252 hypothetical protein 30 3.9
At1g67650.1 68414.m07720 expressed protein 30 3.9
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 30 3.9
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 30 5.2
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 29 9.0
At3g05680.1 68416.m00634 expressed protein 29 9.0
At1g36370.1 68414.m04518 glycine hydroxymethyltransferase, putat... 29 9.0
>At5g15930.1 68418.m01863 plant adhesion molecule 1 (PAM1) identical
to plant adhesion molecule 1 [Arabidopsis thaliana]
GI:3511223; contains Pfam profile PF00566: TBC domain
Length = 356
Score = 183 bits (445), Expect = 4e-46
Identities = 101/282 (35%), Positives = 162/282 (57%), Gaps = 19/282 (6%)
Query: 47 DRYGFIHDER--LPQKTAPQKINIELEREKK----WLKMLEEWGTS---ETKQKLH---R 94
DR+GF+ E PQ+ K +I E+E+K W KM+ G+ ++K H R
Sbjct: 21 DRFGFLKQEHGSSPQRFTKTKSSINYEKEEKRVTKWRKMIGTGGSDWKHYVRRKPHVVKR 80
Query: 95 RIYKGIPNSLRIGVWSKLLDVNRMRSDNPGKYREMLKLAKLWSTDVRQID--SDVNRQFR 152
RI KGIP+ LR VW + + NPG Y +++ ++ T ++D D++R F
Sbjct: 81 RIRKGIPDCLRGLVWQLISGSRDLLLMNPGVYVQLV----IYETSASELDIIRDISRTFP 136
Query: 153 EHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMDEEDAFWALAVLL 212
H F+++R+ Q SL+NVL AYS+Y+ +VGY QGM +AG+LL+YM EEDAFW L LL
Sbjct: 137 SHVFFQKRHGPGQRSLYNVLKAYSVYDRDVGYVQGMGFIAGLLLLYMSEEDAFWLLVALL 196
Query: 213 SDKKYA-MHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFVCF 271
++ + GLY G P + ++L D+++ + MPKL HF + ++ +Y+ +WF F
Sbjct: 197 KGAVHSPIEGLYQAGLPLVQQYLLQFDQLVRELMPKLGEHFTQEMINPSMYASQWFITVF 256
Query: 272 VERVPFSLCLRVWDIYLLDGERVITAMAYTILKLHKKTIMKL 313
+PF LR+WD++L +G +++ + +LK ++KL
Sbjct: 257 SYSLPFHSALRIWDVFLAEGVKIVFKVGLALLKHCHDDLLKL 298
>At3g02460.1 68416.m00233 plant adhesion molecule, putative strong
similarity to plant adhesion molecule 1 [Arabidopsis
thaliana] GI:3511223; contains Pfam profile PF00566: TBC
domain
Length = 353
Score = 176 bits (429), Expect = 3e-44
Identities = 99/284 (34%), Positives = 163/284 (57%), Gaps = 21/284 (7%)
Query: 47 DRYGFIHDERL--PQKTAPQKI--NIELERE----KKWLKMLEEWGTS---ETKQK---L 92
DR+GF+ E P++ + K + + +RE +KW KM+ G+ ++K +
Sbjct: 22 DRFGFLKQEHANSPERFSKSKTTSSTDHDREERKVRKWRKMIGVGGSDWKHYVRRKPNVV 81
Query: 93 HRRIYKGIPNSLRIGVWSKLLDVNRMRSDNPGKYREMLKLAKLWSTDVRQID--SDVNRQ 150
RRI KGIP+ LR VW + + NPG Y +++ ++ T ++D D++R
Sbjct: 82 RRRIRKGIPDCLRGLVWQLISGSRDLLLMNPGVYEQLV----IYETSASELDIIRDISRT 137
Query: 151 FREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMDEEDAFWALAV 210
F H F+++R+ Q SL+NVL AYS+Y+ +VGY QGM +AG+LL+YM EEDAFW L
Sbjct: 138 FPSHVFFQKRHGPGQRSLYNVLKAYSVYDRDVGYVQGMGFIAGLLLLYMSEEDAFWLLVA 197
Query: 211 LLSDKKYA-MHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFV 269
LL +A M GLY G P + ++L + ++ + +PKL HF + ++ +Y+ +WF
Sbjct: 198 LLKGAVHAPMEGLYHAGLPLVQQYLFQLESLVKELIPKLGEHFTQEMINPSMYASQWFIT 257
Query: 270 CFVERVPFSLCLRVWDIYLLDGERVITAMAYTILKLHKKTIMKL 313
F PF L LR+WD++L +G +++ + +LK + ++KL
Sbjct: 258 VFSYSFPFPLALRIWDVFLSEGVKIVFKVGLALLKYCQDELVKL 301
>At3g02460.2 68416.m00234 plant adhesion molecule, putative strong
similarity to plant adhesion molecule 1 [Arabidopsis
thaliana] GI:3511223; contains Pfam profile PF00566: TBC
domain
Length = 333
Score = 165 bits (402), Expect = 6e-41
Identities = 94/259 (36%), Positives = 149/259 (57%), Gaps = 21/259 (8%)
Query: 47 DRYGFIHDERL--PQKTAPQKI--NIELERE----KKWLKMLEEWGTS---ETKQK---L 92
DR+GF+ E P++ + K + + +RE +KW KM+ G+ ++K +
Sbjct: 22 DRFGFLKQEHANSPERFSKSKTTSSTDHDREERKVRKWRKMIGVGGSDWKHYVRRKPNVV 81
Query: 93 HRRIYKGIPNSLRIGVWSKLLDVNRMRSDNPGKYREMLKLAKLWSTDVRQID--SDVNRQ 150
RRI KGIP+ LR VW + + NPG Y +++ ++ T ++D D++R
Sbjct: 82 RRRIRKGIPDCLRGLVWQLISGSRDLLLMNPGVYEQLV----IYETSASELDIIRDISRT 137
Query: 151 FREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMDEEDAFWALAV 210
F H F+++R+ Q SL+NVL AYS+Y+ +VGY QGM +AG+LL+YM EEDAFW L
Sbjct: 138 FPSHVFFQKRHGPGQRSLYNVLKAYSVYDRDVGYVQGMGFIAGLLLLYMSEEDAFWLLVA 197
Query: 211 LLSDKKYA-MHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFV 269
LL +A M GLY G P + ++L + ++ + +PKL HF + ++ +Y+ +WF
Sbjct: 198 LLKGAVHAPMEGLYHAGLPLVQQYLFQLESLVKELIPKLGEHFTQEMINPSMYASQWFIT 257
Query: 270 CFVERVPFSLCLRVWDIYL 288
F PF L LR+WD++L
Sbjct: 258 VFSYSFPFPLALRIWDVFL 276
>At3g07890.1 68416.m00964 RabGAP/TBC domain-containing protein
similar to plant adhesion molecule 1 [Arabidopsis
thaliana] GI:3511223; contains Pfam profile PF00566: TBC
domain
Length = 400
Score = 120 bits (290), Expect = 2e-27
Identities = 80/256 (31%), Positives = 122/256 (47%), Gaps = 8/256 (3%)
Query: 92 LHRRIYKGIPNSLRIGVWSKLLDVNRMRSDNPGKYREMLKLAK--LWSTDVRQIDSDVNR 149
L R I KGIP LR VW L + +S P Y L A + + RQID D+ R
Sbjct: 109 LKRLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYSDLTKAVEGMVTPATRQIDHDLPR 168
Query: 150 QFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMD-EEDAFWAL 208
F H + E +L VL YS +S+VGYCQG++ +A +LL+ M EEDAFW L
Sbjct: 169 TFPGHPWLDT--PEGHAALRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWML 226
Query: 209 AVLLSDKKYAMHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFF 268
AVLL + + Y +L + ++ H + G D L + +WF
Sbjct: 227 AVLLEN--VLVRDCYTTNLSGCHVEQRVFKDLLAQKCSRIATHLEDMGFDVSLVATEWFL 284
Query: 269 VCFVERVPFSLCLRVWDIYLLDGERVITAMAYTILKLHKKTIMKLNDMDLIVNYIQVKLH 328
F + +P LRVWD+ +G +V+ A I K+ + ++ + + ++N +Q H
Sbjct: 285 CLFSKSLPSETTLRVWDVLFYEGAKVLFHAALAIFKMKENELLMTHQVGDVINILQKTSH 344
Query: 329 KDFGYEDDIVIYQLEK 344
+ F D+++ EK
Sbjct: 345 QLFD-PDELLTVAFEK 359
>At2g37290.1 68415.m04574 RabGAP/TBC domain-containing protein low
similarity to Rab6 GTPase activating protein, GAPCenA
[Homo sapiens] GI:12188746; contains Pfam profile
PF00566: TBC domain
Length = 882
Score = 110 bits (265), Expect = 2e-24
Identities = 74/244 (30%), Positives = 118/244 (48%), Gaps = 17/244 (6%)
Query: 90 QKLHRRIYKGIPNSLRIGVWSKLLDVNRMRSDNPGKYREMLKL---AKLWSTDV-----R 141
++L + G+P LR VW + V R + Y+++L + S+DV +
Sbjct: 308 EELEVLVRLGVPKDLRGEVWQAFVGVKARRVER--YYQDLLAQITNSDENSSDVQRKWKK 365
Query: 142 QIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMDE 201
QI+ D+ R F H E + SL +L AY+ +N VGYCQ M+ AG+LL+ M E
Sbjct: 366 QIEKDIPRTFPGHPALNENGRD---SLRRILLAYACHNPSVGYCQAMNFFAGLLLLLMPE 422
Query: 202 EDAFWALAVLLSDKKYAMHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAIL 261
E+AFW L ++ D G Y E + ++++ + PKL H D G+
Sbjct: 423 ENAFWTLVGIIDD---YFDGYYTEEMIESQVDQLVFEELMRERFPKLVNHLDYLGVQVAW 479
Query: 262 YSLKWFFVCFVERVPFSLCLRVWDIYLLDGERVIT-AMAYTILKLHKKTIMKLNDMDLIV 320
S WF FV +P+ LR+WD+ L +G RV+ A+ I++L+ I+ D +
Sbjct: 480 ISGPWFLSIFVNIIPWECVLRMWDVLLFEGNRVVLFRTAFAIMELYGPAIVATKDAGDAI 539
Query: 321 NYIQ 324
+Q
Sbjct: 540 TSLQ 543
>At2g39280.1 68415.m04823 RabGAP/TBC domain-containing protein
contains Pfam profile PF00566: TBC domain
Length = 771
Score = 99.1 bits (236), Expect = 7e-21
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 120 SDNPGKYREMLKLAKLWSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYN 179
+D G + L + + W QI+ D+ R F H + + +L +L AY+ +N
Sbjct: 277 TDEKGSSTDPLSVVEKWKG---QIEKDLPRTFPGHPALDDDFRN---ALRRLLTAYARHN 330
Query: 180 SEVGYCQGMSGLAGVLLMYMDEEDAFWALAVLLSDKKYAMHGLYIEGFPKLTRFLEHHDK 239
VGYCQ M+ A +LL+ M EE+AFW+L ++ D H Y E + ++
Sbjct: 331 PSVGYCQAMNFFAALLLLLMPEENAFWSLTGIIDD---YFHDYYSEEMLESQVDQRVLEE 387
Query: 240 ILTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDIYLLDGERV-ITAM 298
+L + PKL H D G+ + WF F+ +P+ LRVWD+ L +G RV +
Sbjct: 388 LLRERFPKLVHHLDYLGVQVACVTGPWFLTIFINMLPWESVLRVWDVLLFEGNRVMLFRT 447
Query: 299 AYTILKLHKKTIMKLNDMDLIVNYIQ 324
A +++ + ++ D+ V +Q
Sbjct: 448 ALALMEFYGPALVTTKDIGDAVTLLQ 473
>At3g55020.1 68416.m06110 RabGAP/TBC domain-containing protein low
similarity to SP|Q9BXI6 EBP50-PDZ interactor of 64 kDa
(EPI64 protein) {Homo sapiens}; contains Pfam profile
PF00566: TBC domain
Length = 777
Score = 97.1 bits (231), Expect = 3e-20
Identities = 78/305 (25%), Positives = 135/305 (44%), Gaps = 13/305 (4%)
Query: 121 DNPGKYREMLKLAKLWSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNS 180
D+ G E + + + W QI+ D+ R F H + + + +L +L AY+ +N
Sbjct: 291 DDKGSSTESIAVVEKWKG---QIEKDLPRTFPGHPALDD---DGRNALRRLLTAYARHNP 344
Query: 181 EVGYCQGMSGLAGVLLMYMDEEDAFWALAVLLSDKKYAMHGLYIEGFPKLTRFLEHHDKI 240
VGYCQ M+ A +LL+ M EE+AFWAL L+ D +G Y E + +++
Sbjct: 345 SVGYCQAMNFFAALLLLLMPEENAFWALIGLIDD---YFNGYYSEEMIESQVDQLVLEEL 401
Query: 241 LTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDIYLLDGERV-ITAMA 299
+ + PKL H D G+ + WF F+ +P+ LRVWD+ L +G RV + A
Sbjct: 402 VRERFPKLVHHLDYLGVQVAWVTGPWFLSIFMNMLPWESVLRVWDVLLFEGTRVMLFRTA 461
Query: 300 YTILKLHKKTIMKLNDMDLIVNYIQVKLHKDFGYEDDIVIYQL-EKSMEELKRAKLDYPG 358
+++L+ ++ D V +Q F ++ + +++ E++ +L
Sbjct: 462 LALMELYGPALVTTKDAGDAVTLLQSLTGSTFDSSQLVLTACMGYQNVHEIRLQELRSKH 521
Query: 359 LPPP-NELPKRPLGVFVEPDKKSKIGQRAENFSETEKQARANVILRREKAALELQELRVS 417
P L +R G+ D K + + NF + K + +L E S
Sbjct: 522 RPAVIAALEERSKGLQAWRDSKG-LASKLYNFKQDPKSVLVDSKASLSNGSLSRSESGSS 580
Query: 418 QSDTV 422
+D V
Sbjct: 581 NADEV 585
>At5g54780.1 68418.m06824 RabGAP/TBC domain-containing protein
contains similarity to SP|P09379 GTPase-activating
protein GYP7 (Fragment) {Yarrowia lipolytica}; contains
Pfam profile PF00566: TBC domain
Length = 435
Score = 71.7 bits (168), Expect = 1e-12
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 136 WSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAGVL 195
W + QI DVNR R FY ++ E L+++L Y+ +++VGYCQGMS L +
Sbjct: 167 WLLTLHQIGLDVNRTDRTLVFYEKK--ENLSKLWDILALYAWIDNDVGYCQGMSDLCSPM 224
Query: 196 LMYM-DEEDAFWALAVLLSDKK--YAMHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHF 252
+M + DE DAFW L+ + + G + +LT H I PKL H
Sbjct: 225 IMLLEDEADAFWCFERLMRRLRGNFRDTGRSVGVEAQLT----HLASITQIIDPKLHHHL 280
Query: 253 DKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDI 286
+K G L++++ V F F L +W++
Sbjct: 281 EKLGGGDYLFAIRMIMVQFRREFSFCDSLYLWEM 314
>At2g30710.1 68415.m03746 RabGAP/TBC domain-containing protein
similar to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 440
Score = 62.5 bits (145), Expect = 8e-10
Identities = 69/312 (22%), Positives = 128/312 (41%), Gaps = 52/312 (16%)
Query: 72 REKKWLKMLEEWGTSETKQKLHRRIYKGIPNSLRIGVWSKLLDVNRMRSDNPGKYREMLK 131
R K+ K+L E T+ +KL + G+P+ +R VW LL SD +
Sbjct: 118 RVMKFNKVLSE--TTVILEKLRELAWNGVPHYMRPDVWRLLLGYAPPNSDRREAVLRRKR 175
Query: 132 LAKLWSTD-----------------VRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCA 174
L L S +RQI D R + F+++ +K SL +L
Sbjct: 176 LEYLESVGQFYDLPDSERSDDEINMLRQIAVDCPRTVPDVSFFQQEQVQK--SLERILYT 233
Query: 175 YSLYNSEVGYCQGMSGLAGVLLM-----YMD-------------------EEDAFWALAV 210
+++ + GY QG++ L L+ Y+D E D +W L
Sbjct: 234 WAIRHPASGYVQGINDLVTPFLVIFLSEYLDGGVDSWSMDDLSAEKVSDVEADCYWCLTK 293
Query: 211 LLSDKKYAMHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFVC 270
LL M Y P + R + +++ + + RH ++ GL+ + ++ +W+
Sbjct: 294 LLD----GMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRHMEEHGLEFLQFAFRWYNCL 349
Query: 271 FVERVPFSLCLRVWDIYLLDGERVITAMAY---TILKLHKKTIMKLNDMDLIVNYIQVKL 327
+ +PF+L R+WD YL +G+ + + Y + L + KL+ ++++ +
Sbjct: 350 LIREIPFNLINRLWDTYLAEGDALPDFLVYIYASFLLTWSDELKKLDFQEMVMFLQHLPT 409
Query: 328 HKDFGYEDDIVI 339
H E ++V+
Sbjct: 410 HNWSDQELEMVL 421
>At4g27100.1 68417.m03895 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 487
Score = 60.1 bits (139), Expect = 4e-09
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 136 WSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAG-V 194
W + QI DVNR R FY ++ E L+++L Y+ +++VGYCQGMS L +
Sbjct: 169 WLLTLHQIGLDVNRTDRALVFYEKK--ENLSKLWDILSVYAWIDNDVGYCQGMSDLCSPM 226
Query: 195 LLMYMDEEDAFWALAVLLSDKKYAMH 220
+++ DE DAFW L+ +H
Sbjct: 227 IILLEDEADAFWCFERLMRRLVLTLH 252
>At5g52590.1 68418.m06530 RabGAP/TBC domain-containing protein
contains similarity to SP|P48365 GTPase-activating
protein GYP7 {Saccharomyces cerevisiae}; contains Pfam
profile PF00566: TBC domain
Length = 338
Score = 59.3 bits (137), Expect = 7e-09
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 143 IDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSG-LAGVLLMYMDE 201
ID DV R R ++Y + S+ ++L YS YN ++GYCQGMS L+ +L + DE
Sbjct: 104 IDKDVVRTDRAFEYYEGDDNLHVNSMRDILLTYSFYNFDLGYCQGMSDYLSPILFVMEDE 163
Query: 202 EDAFWALAVLLS----DKKYAMHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGL 257
++FW L+ + +G++ + F L++ +E D L +F +
Sbjct: 164 SESFWCFVALMERLGPNFNRDQNGMHTQLF-ALSKLVELLDS-------PLHNYFKENDC 215
Query: 258 DAILYSLKWFFVCFVERVPFSLCLRVWDI----YLLDGERVITAMAYTILKLHKKTIM-K 312
+ +W + F + +++W++ YL + + +A +LK + IM +
Sbjct: 216 LNYFFCFRWILIQFKREFEYEKTMQLWEVMWTHYLSEHFHLYVCVA--VLKRCRSKIMGE 273
Query: 313 LNDMDLIVNYI 323
D D ++ +I
Sbjct: 274 QMDFDTLLKFI 284
>At3g59570.1 68416.m06647 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 720
Score = 57.6 bits (133), Expect = 2e-08
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 136 WSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAG-V 194
W + +I DV R +FY + + + S ++L Y+ + GYCQGMS L
Sbjct: 359 WLWTLHRIVVDVVRTDSHLEFYEDPGNLGRMS--DILAVYAWVDPATGYCQGMSDLVSPF 416
Query: 195 LLMYMDEEDAFWALAVLLSDKKYAMHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDK 254
+ ++ D DAFW +L+ + +EG + L+ +IL ++ H +
Sbjct: 417 VFLFEDNADAFWCFEMLI---RRTRANFQMEGPTGVMDQLQSLWRILQLTDKEMFSHLSR 473
Query: 255 FGLDAILYSLKWFFVCFVERVPFSLCLRVWDI 286
G +++ ++ + V F + F+ LR+W++
Sbjct: 474 IGAESLHFAFRMLLVLFRRELSFNKALRMWEM 505
>At5g53570.1 68418.m06656 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 550
Score = 56.8 bits (131), Expect = 4e-08
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 8/183 (4%)
Query: 109 WSKLLDVNRMRSDNPGKYREMLKLAKLWSTDVRQIDSDVNRQFREHQFYRERYSEKQCSL 168
W +++ ++ +R+D+ A + + R++ V + +H Y + L
Sbjct: 284 WQRIIRLDALRADSEWANYSPYSTA-ITESKARRLAESVGLKDYDHLESCRLYHAAR--L 340
Query: 169 FNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMDEE-DAFWALAVLLSDKKYAMHGLYIEGF 227
+L AY++Y+ E+GYCQGMS L +L + E+ +AFW + K A H ++
Sbjct: 341 VAILEAYAMYDPEIGYCQGMSDLLSPILAVISEDHEAFWCFVGFM---KKARHNFRLDE- 396
Query: 228 PKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDIY 287
+ R L KI+ +L +H + + + + V F + F L +W++
Sbjct: 397 AGIQRQLSIVSKIIKNKDSQLYKHLENLQAEDCSFVYRMVLVMFRRELSFEQTLCLWEVM 456
Query: 288 LLD 290
D
Sbjct: 457 WAD 459
>At2g43490.1 68415.m05404 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 756
Score = 56.0 bits (129), Expect = 7e-08
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 111 KLLDVNRMRS--DNPGKYREMLK-LAKLWSTDVRQIDSDVNRQFREHQFYRERYSEKQCS 167
++ DV M S D P + + + W + +I DV R +FY + + + S
Sbjct: 327 RISDVPEMASVKDTPSRVGNVTEDRVSEWLWTLHRIVVDVVRTDSHLEFYEDPGNLGRMS 386
Query: 168 LFNVLCAYSLYNSEVGYCQGMSGLAG-VLLMYMDEEDAFWALAVLLSDKKYAMHGLYIEG 226
++L Y+ + GYCQGMS L ++++ D DAFW +L+ + +EG
Sbjct: 387 --DILAVYAWVDPATGYCQGMSDLVSPFVVLFEDNADAFWCFEMLI---RRTRANFQMEG 441
Query: 227 FPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDI 286
+ L+ IL + H + G +++ ++ + V F + F+ LR+W++
Sbjct: 442 PTGVMDQLQSLWHILQITDKDIFSHLSRIGAESLHFAFRMLLVLFRRELSFNEALRMWEM 501
>At5g41940.1 68418.m05106 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 549
Score = 55.6 bits (128), Expect = 9e-08
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 168 LFNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMDEED-AFWALAVLLSDKKYAMHGLYIEG 226
L +L AY++Y+ E+GYCQGMS L L+ M+++ AFW +S A H ++
Sbjct: 347 LVGILEAYAVYDPEIGYCQGMSDLLSPLIAVMEDDVLAFWCFVGFMSK---ARHNFRLDE 403
Query: 227 FPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDI 286
+ R L KI+ L RH + + + + V F + F L +W++
Sbjct: 404 V-GIRRQLSMVSKIIKFKDIHLYRHLENLEAEDCFFVYRMVVVLFRRELTFEQTLCLWEV 462
Query: 287 YLLDGERVITAMA 299
D + T +A
Sbjct: 463 MWADQAAIRTGIA 475
>At3g49350.1 68416.m05395 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 554
Score = 54.8 bits (126), Expect = 2e-07
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 168 LFNVLCAYSLYNSEVGYCQGMSG-LAGVLLMYMDEEDAFWALAVLLSDKKYAMHGLYIEG 226
L VL AY+LY+ ++GYCQGMS L+ +L + D+ + FW + K A H ++
Sbjct: 347 LVAVLEAYALYDPDIGYCQGMSDLLSPILSVIPDDHEVFWCFVGFM---KKARHNFRLDE 403
Query: 227 FPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDI 286
+ R L KI+ +L RH +K + + + V F + L +W++
Sbjct: 404 V-GIRRQLNIVSKIIKSKDSQLYRHLEKLQAEDCFFVYRMVVVMFRRELTLDQTLCLWEV 462
Query: 287 YLLDGERVITAM 298
D + M
Sbjct: 463 MWADQAAIRAGM 474
>At5g24390.1 68418.m02875 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 528
Score = 54.4 bits (125), Expect = 2e-07
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 168 LFNVLCAYSLYNSEVGYCQGMSG-LAGVLLMYMDEEDAFWALAVLLSDKKYAMHGLYIEG 226
L VL AY+L++ E+GYCQGMS L+ +L + D+ +AFW + K A ++
Sbjct: 319 LVAVLEAYALHDPEIGYCQGMSDLLSPILSVIPDDYEAFWCFVGFM---KKARQNFRVDE 375
Query: 227 FPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDI 286
+TR L KI+ +L +H +K + + + V F + L +W++
Sbjct: 376 V-GITRQLNIVSKIIKSKDSQLYKHLEKVKAEDCFFVYRMVLVMFRRELTLEQTLHLWEV 434
Query: 287 YLLDGERVITAM 298
D + M
Sbjct: 435 IWADQAAIRAGM 446
>At2g20440.1 68415.m02386 RabGAP/TBC domain-containing protein
similar to SP|P09379 GTPase-activating protein GYP7
(Fragment) {Yarrowia lipolytica}; contains Pfam profile
PF00566: TBC domain
Length = 425
Score = 53.6 bits (123), Expect = 4e-07
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 5/152 (3%)
Query: 136 WSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAG-V 194
W + QI DV R R FY Q L++VL Y+ N ++GY QGM+ + +
Sbjct: 163 WMLSLHQIGLDVARTDRYLCFYEN--DRNQSKLWDVLAIYTWLNLDIGYVQGMNDICSPM 220
Query: 195 LLMYMDEEDAFWALAVLLSDKKYAMHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDK 254
++++ DE DAFW + + + L +++ P+L +H +
Sbjct: 221 IILFDDEGDAFWCFERAMRRLRENFRATATS--MGVQTQLGVLSQVIKTVDPRLHQHLED 278
Query: 255 FGLDAILYSLKWFFVCFVERVPFSLCLRVWDI 286
L++++ V F F L +W++
Sbjct: 279 LDGGEYLFAIRMLMVLFRREFSFLDALYLWEL 310
>At4g28550.1 68417.m04084 RabGAP/TBC domain-containing protein
similar to SP|P09379 GTPase-activating protein GYP7
(Fragment) {Yarrowia lipolytica}; contains Pfam profile
PF00566: TBC domain
Length = 424
Score = 50.4 bits (115), Expect = 3e-06
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
Query: 136 WSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAG-V 194
W + QI DV R R FY Q L+++L Y+ N ++GY QGM+ + +
Sbjct: 163 WMLVLSQIGLDVVRTDRYLCFYESE--SNQARLWDILSIYTWLNPDIGYVQGMNDICSPM 220
Query: 195 LLMYMDEEDAFWALAVLLSDKKYAMHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDK 254
+++ DE DAFW + ++ + + L +++ P+L +H +
Sbjct: 221 IILLEDEADAFWCFERAM--RRLRENFRTTATSMGVQTQLGMLSQVIKTVDPRLHQHLED 278
Query: 255 FGLDAILYSLKWFFVCFVERVPFSLCLRVWDI 286
L++++ V F F L +W++
Sbjct: 279 LDGGEYLFAIRMLMVLFRREFSFLDALYLWEL 310
>At1g04830.1 68414.m00479 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 448
Score = 40.7 bits (91), Expect = 0.003
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 21/181 (11%)
Query: 133 AKLWST------DVRQIDSDVNRQFREHQFYRERYS---EKQCSLFNVLCAYSLYNSEVG 183
A +W+T + QID DV R + F+ S Q S+ N+L ++ N +
Sbjct: 211 ASIWNTYFQDTETIEQIDRDVKRTHPDIPFFSGESSFARSNQESMKNILLVFAKLNQGIR 270
Query: 184 YCQGMSG-LAGVLLMYMD----------EEDAFWALAVLLSDKKYAMHGLYIEGFPKLTR 232
Y QGM+ LA + ++ + E DAF+ LLS + +
Sbjct: 271 YVQGMNEILAPIFYVFRNDPDEDSSSHAEADAFFCFVELLSGFRDFYCQQLDNSVVGIRS 330
Query: 233 FLEHHDKILTKFMPKLKRHFD-KFGLDAILYSLKWFFVCFVERVPFSLCLRVWDIYLLDG 291
+ +++ K +L RH + ++ Y+ +W + + F L +WD L D
Sbjct: 331 AITRLSQLVRKHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFSFFDSLHIWDALLSDP 390
Query: 292 E 292
E
Sbjct: 391 E 391
>At4g13730.2 68417.m02131 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 408
Score = 35.5 bits (78), Expect = 0.10
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 27/174 (15%)
Query: 140 VRQIDSDVNRQFREHQFYRERYS---EKQCSLFNVLCAYSLYNSEVGYCQGMSG-LAGVL 195
+ QI+ DV R + F+ + Q +L N+L ++ N + Y QGM+ LA +
Sbjct: 228 LEQIERDVMRTHPDMHFFSGDSAVAKSNQDALKNILTIFAKLNPGIRYVQGMNEILAPIF 287
Query: 196 LMYMD----------EEDAFWALAVLLS---DKKYAMHGLYIEGF----PKLTRFLEHHD 238
++ + E DAF+ L+S D + G +L+ L+HHD
Sbjct: 288 YIFKNDPDKGNAAYAESDAFFCFVELMSGFRDNFCQQLDNSVVGIRYTITRLSLLLKHHD 347
Query: 239 KILTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDIYLLDGE 292
+ L + + + +F Y+ +W + + F L +WD L D E
Sbjct: 348 EELWRHLEVTTKINPQF------YAFRWITLLLTQEFNFVESLHIWDTLLSDPE 395
>At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 449
Score = 35.5 bits (78), Expect = 0.10
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 27/174 (15%)
Query: 140 VRQIDSDVNRQFREHQFYRERYS---EKQCSLFNVLCAYSLYNSEVGYCQGMSG-LAGVL 195
+ QI+ DV R + F+ + Q +L N+L ++ N + Y QGM+ LA +
Sbjct: 228 LEQIERDVMRTHPDMHFFSGDSAVAKSNQDALKNILTIFAKLNPGIRYVQGMNEILAPIF 287
Query: 196 LMYMD----------EEDAFWALAVLLS---DKKYAMHGLYIEGF----PKLTRFLEHHD 238
++ + E DAF+ L+S D + G +L+ L+HHD
Sbjct: 288 YIFKNDPDKGNAAYAESDAFFCFVELMSGFRDNFCQQLDNSVVGIRYTITRLSLLLKHHD 347
Query: 239 KILTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDIYLLDGE 292
+ L + + + +F Y+ +W + + F L +WD L D E
Sbjct: 348 EELWRHLEVTTKINPQF------YAFRWITLLLTQEFNFVESLHIWDTLLSDPE 395
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 35.1 bits (77), Expect = 0.14
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 9/126 (7%)
Query: 333 YEDDIVIYQLEKSMEELKRAKLDYPGLPPPNELPKRPLGVFVEPDKKSKIGQRAENFSET 392
Y +I ++Q + E K + P +PPP E+P + + + K GQR +E
Sbjct: 244 YASEIRLFQEGRKEAEEKTSYWQLPWIPPPTEVPPSEEEIARKAAIREKQGQRLREMAEA 303
Query: 393 EKQARANVILRREKAALELQELRVSQSDTVSEHSGLASGVRCDDSVSGLGSRRSLADTSV 452
++ ++ N + E + L+ L + Q D V E + S +G SR+ L T
Sbjct: 304 KRVSKINDM---ENQLISLRFL-LKQVDQVEE-----DDIPTFLSDTGYASRQELESTIT 354
Query: 453 TSTADL 458
T L
Sbjct: 355 KVTQSL 360
>At1g11400.2 68414.m01310 expressed protein
Length = 204
Score = 35.1 bits (77), Expect = 0.14
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 325 VKLHKDFGYEDDIVIYQLEKSMEELKRAKLDYPGL-PPPNELPKRPLGVFVEPDKKSKIG 383
+++ + ED++V YQ + S+ + + A PG P P PK E K+ ++
Sbjct: 40 IRIRPGYTPEDEVVKYQSKGSLMKKEMASQGPPGYEPDPAPKPKTKAAKRNERKKEKRLQ 99
Query: 384 QRAENFSETEKQARANVILRREKAALELQELRVSQSDTV 422
AE + +E + +N A E++ L VS ++ V
Sbjct: 100 ATAEKANSSEDGSASNGSQSVNVLASEMEALDVSSNNDV 138
>At1g11400.1 68414.m01309 expressed protein
Length = 204
Score = 35.1 bits (77), Expect = 0.14
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 325 VKLHKDFGYEDDIVIYQLEKSMEELKRAKLDYPGL-PPPNELPKRPLGVFVEPDKKSKIG 383
+++ + ED++V YQ + S+ + + A PG P P PK E K+ ++
Sbjct: 40 IRIRPGYTPEDEVVKYQSKGSLMKKEMASQGPPGYEPDPAPKPKTKAAKRNERKKEKRLQ 99
Query: 384 QRAENFSETEKQARANVILRREKAALELQELRVSQSDTV 422
AE + +E + +N A E++ L VS ++ V
Sbjct: 100 ATAEKANSSEDGSASNGSQSVNVLASEMEALDVSSNNDV 138
>At5g57210.1 68418.m07147 microtubule-associated protein-related
contains some similarity to microtubule-associated
protein GI:5032258 from [Arabidopsis thaliana]; contains
Pfam profile PF00566: TBC domain
Length = 737
Score = 34.7 bits (76), Expect = 0.18
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 101 PNSLRIGVWSKLLDVNRMRSDNPGK-YREMLKLAKLWSTDVRQIDSDVNRQFREHQFYRE 159
P+ + G S L ++ S NP + + A+L T +D D++R + EH Y +
Sbjct: 78 PHLPKKGTNSPDLTIDNPLSQNPDSTWGRFFRNAELEKT----LDQDLSRLYPEHGSYFQ 133
Query: 160 RYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAGVLL 196
S Q L +L + L + E+GY QGM L LL
Sbjct: 134 S-SGCQGMLRRILLLWCLKHPEIGYRQGMHELLAPLL 169
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 248 LKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWD-IYLLDGERV 294
L H + G++ ++L+W V F P S L VWD I+ D V
Sbjct: 332 LHSHLVELGVEPQYFALRWLRVLFGREFPLSNLLIVWDEIFSADNSEV 379
>At3g24880.1 68416.m03120 expressed protein
Length = 1957
Score = 33.9 bits (74), Expect = 0.32
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 375 EPDKKSKIGQRAENFSETEKQARANVILRREKAALELQELRVSQSDTVSEHSGLASGVRC 434
E ++ SK +N ETE A RR ++ + R S +D V GLA+ +
Sbjct: 162 ESERSSK-AHTNQNTKETEDSAIFRPYARRNRSKISRDPARSSSTDLVQNRGGLATSISI 220
Query: 435 -DDSVSGLGSRRSLADTSVTSTADLS--VFSSGRSH-APDNSLDTHS 477
SV G G A+ T +S VF++ + P N + ++S
Sbjct: 221 RRGSVEGKGCIPEAANQKDMHTTSVSCPVFANSNGNIVPKNRVSSNS 267
>At3g24870.1 68416.m03119 expressed protein
Length = 1841
Score = 33.9 bits (74), Expect = 0.32
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 375 EPDKKSKIGQRAENFSETEKQARANVILRREKAALELQELRVSQSDTVSEHSGLASGVRC 434
E ++ SK +N ETE A RR ++ + R S +D V GLA+ +
Sbjct: 157 ESERSSK-AHTNQNTKETEDSAIFRPYARRNRSKISRDPARSSSTDLVQNRGGLATSISI 215
Query: 435 -DDSVSGLGSRRSLADTSVTSTADLS--VFSSGRSH-APDNSLDTHS 477
SV G G A+ T +S VF++ + P N + ++S
Sbjct: 216 RRGSVEGKGCIPEAANQKDMHTTSVSCPVFANSNGNIVPKNRVSSNS 262
>At2g21990.1 68415.m02612 expressed protein contains Pfam profile
PF04759: Protein of unknown function, DUF617
Length = 252
Score = 33.1 bits (72), Expect = 0.56
Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 494 MSIQRAPSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSPKK 547
M QRA S ST + PSASP R HVT PSH H KK
Sbjct: 1 MGEQRASGASSSTDSYSTPSPSASPSPSPAPRQHVT----LLEPSHQHKKKSKK 50
>At2g19240.1 68415.m02246 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 840
Score = 32.3 bits (70), Expect = 0.97
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Query: 80 LEEWGTSETKQKLHRRIYKGIPNSLRIGVWSKLLDVNRMRSDNPGK-YREMLKLAKLWST 138
++E+ + + RR+ P+ L+ S ++ S NP + + + A+L T
Sbjct: 48 IDEFRRAAANSRRRRRLLMD-PHVLKHEDSSPNFIIDNPLSQNPNSTWGQFFRNAELEKT 106
Query: 139 DVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAGVLL 196
+D D++R + EH Y + Q L +L + L + E GY QGM L LL
Sbjct: 107 ----LDQDLSRLYPEHWCYFQT-PRYQGMLRRILLLWCLKHPEYGYRQGMHELLAPLL 159
>At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyosin
1 [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae};
similar to enterophilin-2L (GI:12718845) [Cavia
porcellus]; similar to latent nuclear antigen
(GI:5669894) [Human herpesvirus 8]; similar to multiple
ligand-binding protein 1 (GI:1403575) [Streptococcus
sp.]
Length = 326
Score = 31.9 bits (69), Expect = 1.3
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 343 EKSMEELKRAKLDYPGLPPP--NELP---KRPLGVFVEPDKKSKIGQRAENFSETEKQAR 397
+++ EEL R K P P P +++P + VF D+K+K ++ +N K+ +
Sbjct: 101 KRAQEELHRKKSKKPNTPAPERDDIPGDGHQETDVFEVLDEKAKESEKTKNDELASKEDQ 160
Query: 398 ANVILRREKAALELQELRVSQSD 420
NV+ R +L++ RVS S+
Sbjct: 161 INVLKAR---LYDLEKERVSLSE 180
>At1g04500.1 68414.m00441 zinc finger CONSTANS-related similar to
Zinc finger protein constans-like 15 (SP:Q9FHH8)
{Arabidopsis thaliana}
Length = 386
Score = 31.9 bits (69), Expect = 1.3
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
Query: 493 GMSIQRAPSTSHSTPRATPHPPSASPMSDDVVRIHVTY-----NPLTASPSHLHPVSPKK 547
G+ + + P+T +S+ PP S +D + +Y NP + S S L
Sbjct: 123 GIQLHQPPNTLYSSSSGDLLPPPLSVFEEDCLSSVPSYNLGSINPSSPSCSFLGNTGLPT 182
Query: 548 YKTYTDDHLKP-ISLGFYTSN---GTNNVPS-DNRIRIQVPSEDLLTP 590
Y T T + + + GFY+ N G++ PS D + IQ + L P
Sbjct: 183 YMTVTGNMMNTGLGSGFYSGNIHLGSDFKPSHDQLMEIQADNGGLFCP 230
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 31.5 bits (68), Expect = 1.7
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSPKKYKTYTDDHLKP 558
+P T + P P S + ++ + V + + +ASPS S K + ++P
Sbjct: 244 SPKTPPEIVQEAPKPTSLNVVTSNGVFAGL-FESSSASPSIYTTSSSSKSLFASSSSIEP 302
Query: 559 ISLGFYTSNGTNNVPSDNRIRIQ 581
ISLG TS+G++ + S NR Q
Sbjct: 303 ISLGLSTSHGSSFLGS-NRFHAQ 324
>At3g09050.1 68416.m01064 expressed protein
Length = 258
Score = 31.5 bits (68), Expect = 1.7
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 229 KLTRFLEHHDKILTKFMPKLKRHFDKFGLDAI 260
+LT FL+ + LTKF + FDK G DA+
Sbjct: 76 RLTDFLDERSEYLTKFAEEANAEFDKVGEDAM 107
>At3g04030.1 68416.m00424 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 388
Score = 31.1 bits (67), Expect = 2.2
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Query: 304 KLHKKTIMKLNDMDLIVNYIQVKLHKDFGYEDDIVIYQLEKSMEELKRAKLDYPGLPPPN 363
K KTIMK+ + + Y +K H + Q S ++ + P +
Sbjct: 70 KATPKTIMKVMGIPGLTLY-HLKSHLQKYRLSKNLNGQANNSFNKIGIMTMMEEKTPDAD 128
Query: 364 ELPKRPLGVFVEPDKKSKIGQRAENFSETEKQARANVILRREKAALELQELRVSQSDTVS 423
E+ L + +P+K S IG+ + E +++ + LR E LQ + +T+
Sbjct: 129 EIQSENLSIGPQPNKNSPIGEALQMQIEVQRRLHEQLELRIEAQGKYLQSVLEKAQETLG 188
Query: 424 EHSGLASGV 432
+ A+G+
Sbjct: 189 RQNLGAAGI 197
>At5g64390.2 68418.m08088 KH domain-containing RNA-binding protein
(HEN4) contains similarity to RNA-binding protein;
identical to cDNA HEN4 isoform 2 (HEN4) GI:28261404;
contains Pfam domain PF00013: KH domain; identical to
cDNA HEN4 (HEN4) GI:28261402
Length = 824
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 361 PPNELPKRPLGVFVEPDKKS--KIGQRAENFSETEKQARANVILRREKAALELQELRVSQ 418
PP+ P R + + + D KS K+G +E EK+ + + + A +++ EL ++
Sbjct: 85 PPSGSPDRVITIIAQADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE 144
Query: 419 SDT 421
+D+
Sbjct: 145 ADS 147
>At5g64390.1 68418.m08089 KH domain-containing RNA-binding protein
(HEN4) contains similarity to RNA-binding protein;
identical to cDNA HEN4 isoform 2 (HEN4) GI:28261404;
contains Pfam domain PF00013: KH domain; identical to
cDNA HEN4 (HEN4) GI:28261402
Length = 857
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 361 PPNELPKRPLGVFVEPDKKS--KIGQRAENFSETEKQARANVILRREKAALELQELRVSQ 418
PP+ P R + + + D KS K+G +E EK+ + + + A +++ EL ++
Sbjct: 85 PPSGSPDRVITIIAQADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE 144
Query: 419 SDT 421
+D+
Sbjct: 145 ADS 147
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 30.3 bits (65), Expect = 3.9
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 501 STSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSPKKYKTYTDDHLKPIS 560
+TSHS +P P S SP+S H + + SP+H SP +++ H S
Sbjct: 199 ATSHSPATPSPSPKSPSPVSHS--PSHSPAHTPSHSPAHTPSHSPAHAPSHSPAHAPSHS 256
Query: 561 LGFYTSNGTNNVPSDNRIRIQVPS 584
S+ + PS + + PS
Sbjct: 257 PAHAPSHSPAHSPSHSPATPKSPS 280
Score = 29.9 bits (64), Expect = 5.2
Identities = 34/129 (26%), Positives = 44/129 (34%), Gaps = 12/129 (9%)
Query: 466 SHAPDNSLDTHSNVXXXXXXXXXXXVCGMSIQRAPSTSHSTPRATPHPPSASPMSDDVVR 525
SH+P +S H+ S A + SHS A H P+ SP
Sbjct: 218 SHSPSHS-PAHTPSHSPAHTPSHSPAHAPSHSPAHAPSHSPAHAPSHSPAHSPS------ 270
Query: 526 IHVTYNPLTASPSHLHPVSPKKYKTYTDDHLKPISLGFYTSNGTNNVPSDNRIRIQVPSE 585
H P + SPS SP T P+S S + PSD + PS
Sbjct: 271 -HSPATPKSPSPSSSPAQSPATPSPMTPQSPSPVS---SPSPDQSAAPSDQSTPL-APSP 325
Query: 586 DLLTPVVDS 594
TP D+
Sbjct: 326 SETTPTADN 334
>At4g29950.1 68417.m04260 microtubule-associated protein identical
to microtubule-associated protein GI:5032258 from
[Arabidopsis thaliana]; similar to TBC1 domain family
member 5 (Swiss-Prot:Q92609) [Homo sapiens]; contains
Pfam profile PF00566: TBC domain
Length = 828
Score = 30.3 bits (65), Expect = 3.9
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 113 LDVNRMRSDNPGK-YREMLKLAKLWSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNV 171
L ++ S NP + + A+L T +D D++R + EH Y + Q L +
Sbjct: 76 LSIDNPLSQNPDSTWGRFFRNAELEKT----LDQDLSRLYPEHWSYFQAPG-CQGMLRRI 130
Query: 172 LCAYSLYNSEVGYCQGMSGLAGVLL 196
L + L + E GY QGM L LL
Sbjct: 131 LLLWCLKHPEYGYRQGMHELLAPLL 155
>At3g10440.1 68416.m01252 hypothetical protein
Length = 556
Score = 30.3 bits (65), Expect = 3.9
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 358 GLPPPNELPKRPLGVFVEPDKKSKIGQRAENFSETEKQARANVILRREKAALELQELRVS 417
GLP E+ + E SK + E E ++ + LRR+ A QEL V+
Sbjct: 362 GLPDDQEIAAKARCSAREQSTGSK-PEAVEPHDTKEIIGKSRISLRRQSARFNFQELGVT 420
Query: 418 QS-DTVSEHSGLASGVRCDDSVSGLGSR 444
++ + + +A+ RC S +GS+
Sbjct: 421 ENLNGPHDDQTIAANARCCASEQSIGSK 448
>At1g67650.1 68414.m07720 expressed protein
Length = 651
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 328 HKDFGYEDDIVIYQLEKSMEELKRAKLDYPGLPPPNELPK-RPLGVFVEPDKKSK----I 382
HK+ Y + +++ M++ + PG+ P + +P V V +K +K +
Sbjct: 314 HKEAIYANRVLLLLHANKMDQARELCATLPGMFPESVIPTLLQAAVLVRENKAAKAEELL 373
Query: 383 GQRAENFSETEK 394
GQ AENF E K
Sbjct: 374 GQCAENFPEKSK 385
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 336 DIVIYQLEKSMEELKRAKLDYPGLPPPNELPKRPL--GVFVEPDKKSK--IGQRAENFSE 391
D+V+ + EK +EE + A+++ P + + + P+ V VE + K++ + + E E
Sbjct: 54 DLVVEETEKPIEETEEAQVETPEVVEIKKDEEAPVETPVVVEDESKTEEVVEAKKEEEVE 113
Query: 392 TEKQARANVILRREK 406
+K A V++ EK
Sbjct: 114 EKKTEEAPVVVEEEK 128
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 29.9 bits (64), Expect = 5.2
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 501 STSHSTPRATPHPPSASPMSDDVVRIHVTY-NPLTASPSHLHPVSP 545
S S S+P +P PPS+SP S + + PL+ SPS P P
Sbjct: 28 SPSSSSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPP 73
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 29.1 bits (62), Expect = 9.0
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1598 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1641
>At3g05680.1 68416.m00634 expressed protein
Length = 2057
Score = 29.1 bits (62), Expect = 9.0
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 514 PSASPMSDDVVRIHVTYNPLTASPSHLHPVSPKKYKTYTDDHLKPISLGFYTSNGTNNVP 573
PS + + VV++ NP A + PK++K DD L+ I + F +G
Sbjct: 1543 PSTIVVGEAVVQVK---NPTPARDTEKVAGKPKQFKADPDDDLQGIDIVF---DGEECEG 1596
Query: 574 SDNRIRIQVPSEDLLTP 590
D+++ P E+L+ P
Sbjct: 1597 PDDKLPFLQPDENLMQP 1613
>At1g36370.1 68414.m04518 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 598
Score = 29.1 bits (62), Expect = 9.0
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 510 TPHPPSASPMSDDVVRIHVTYN----PLTASPSHLHPVSPKKYKTYTDDHLK 557
TP P +P++DD + + V + P T SP L + K KT T D K
Sbjct: 22 TPTPTPRAPIADDSINLQVDQSFRSLPTTFSPIPLQLLEQKAEKTTTVDEPK 73
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,087,283
Number of Sequences: 28952
Number of extensions: 690697
Number of successful extensions: 2062
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1971
Number of HSP's gapped (non-prelim): 87
length of query: 613
length of database: 12,070,560
effective HSP length: 85
effective length of query: 528
effective length of database: 9,609,640
effective search space: 5073889920
effective search space used: 5073889920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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