Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000512-TA|BGIBMGA000512-PA|IPR000195|RabGAP/TBC
(613 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 103 1e-22
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 103 1e-22
SPBC1778.09 |||GTPase activating protein |Schizosaccharomyces po... 101 2e-22
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 89 2e-18
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 85 3e-17
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 80 8e-16
SPAC630.05 |gyp7||GTPase activating protein Gyp7 |Schizosaccharo... 53 1e-07
SPBC530.01 |gyp1||GTPase activating protein Gyp1 |Schizosaccharo... 46 1e-05
SPAC6F6.08c |cdc16|bub2|two-component GAP Cdc16|Schizosaccharomy... 38 0.004
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 36 0.016
SPAC1952.17c ||SPAC890.01c|GTPase activating protein|Schizosacch... 36 0.022
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 34 0.066
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 31 0.35
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 31 0.62
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.82
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 30 0.82
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 30 1.1
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 30 1.1
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 29 1.4
SPBC651.03c |gyp10||GTPase activating protein Gyp10|Schizosaccha... 29 1.9
SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|ch... 29 1.9
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.9
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 28 3.3
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 28 3.3
SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 4.4
SPCC4G3.17 |||HD domain|Schizosaccharomyces pombe|chr 3|||Manual 28 4.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 4.4
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 28 4.4
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 27 5.8
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 27 5.8
SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomy... 27 5.8
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 27 7.6
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 103 bits (246), Expect = 1e-22
Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 13/238 (5%)
Query: 91 KLHRRIYKGIPNSLRIGVWSKLLDVNRMRSDNPGKYREML-KLAKLWSTDVRQIDSDVNR 149
K + G+P + VW + ++ S PG Y E+L + ++ S V QID D+NR
Sbjct: 496 KFRELVKNGVPLCYKAKVWLECSGAYQLHS--PGYYEELLSRTDEVESASVAQIDMDINR 553
Query: 150 QFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGL-AGVLLMYMDEEDAFWAL 208
++ F+ + L +L AYS +N +GYCQGM+ + A +LL+Y EEDAF+ L
Sbjct: 554 TMAKNVFFGGK-GPGIPKLRRILVAYSRHNPHIGYCQGMNVIGAFLLLLYASEEDAFYML 612
Query: 209 AVLLSD---KKYAMHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLK 265
++ + KY L +L + + +P++ H + G+D S
Sbjct: 613 MSIIENVLPPKYFTPDLMTSRADQLVL-----KSFVKESLPEIYSHLELLGVDLDAISFH 667
Query: 266 WFFVCFVERVPFSLCLRVWDIYLLDGERVITAMAYTILKLHKKTIMKLNDMDLIVNYI 323
WF + + +P ++ R++D+ DG + +A TILK K+ I+ N I +++
Sbjct: 668 WFLSVYTDTLPTNISFRIFDMLFCDGYVCLFRVALTILKSLKQQILACNSSSAIYSFL 725
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 103 bits (246), Expect = 1e-22
Identities = 77/291 (26%), Positives = 135/291 (46%), Gaps = 12/291 (4%)
Query: 38 PEFEEYHKTDRYGFIHDERLPQKTAPQKINIELEREKKWLKMLEEWGT--SETKQKLHRR 95
P E D YGF R T P +I+ E + + W + +G S + L +
Sbjct: 159 PNVPEPETKDSYGF--GARYGYPTDP-RISRERAKLRMWKEYFLLYGANLSLIRVSLFSK 215
Query: 96 IYK-GIPNSLRIGVWSKLLDVNRMRSDNPGKYREMLKL-AKLWSTDVRQIDSDVNRQFRE 153
+ + +PN LR +W R +N +Y +LK+ + S + +I+ D+ R E
Sbjct: 216 LVRIELPNKLRGEIWELTSGSMYFRLENSDEYDHLLKVYSGQTSFSLEEIEKDLGRSLPE 275
Query: 154 HQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMDEEDAFWALAVLLS 213
+ Y+ E +L NVL A+S N EVGYCQ M+ +A LL++ EE F+ + +
Sbjct: 276 YPAYQNE--EGINALRNVLVAFSWKNQEVGYCQAMNIVAAALLIHCTEEQTFFLMHKICE 333
Query: 214 DKKYAMHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVE 273
D + G Y + + ++ ++ + MP L HF + + SL WF F+
Sbjct: 334 DY---IPGYYSKTMYGTLIDQQVYESLVQRSMPNLHAHFVSKDIQLSIISLPWFLSLFLC 390
Query: 274 RVPFSLCLRVWDIYLLDGERVITAMAYTILKLHKKTIMKLNDMDLIVNYIQ 324
+P R+ D + L+G RV+ + IL ++ IMK + ++++ ++
Sbjct: 391 TMPLPYAFRLLDFFFLEGPRVLFQIGMAILYDNEAEIMKATEDTMLISILK 441
>SPBC1778.09 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 414
Score = 101 bits (243), Expect = 2e-22
Identities = 78/234 (33%), Positives = 116/234 (49%), Gaps = 17/234 (7%)
Query: 69 ELEREKKWLKMLE-------EWGTSETKQKLHRRIYKGIPNSLR-IGVWSKLLDVNRMRS 120
EL R +KW M + + +KL R +KGIP+ R I WS L+D +
Sbjct: 121 ELSRIQKWKSMCSIHLVSGNQLHSFRKTRKLILRTFKGIPDCWRSIAWWSFLVD-SLPDK 179
Query: 121 DNPGKYREMLKLAKLWSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNS 180
KY ++ + ++ DV QID DV R H +R+RY Q LF VL A +LY
Sbjct: 180 KLIDKYYQLNE--QICDYDV-QIDLDVPRTAATHFLFRKRYIGGQRLLFRVLHAVALYIP 236
Query: 181 EVGYCQGMSGLAGVLLMYMDEEDAFWALAVLLSDKKYAMHGLYIEGFPKLTRFLEHHDKI 240
VGY QGM+ +A LL+Y EE AF + LL ++ M L+ GF L + +
Sbjct: 237 RVGYVQGMASIAATLLIYYPEEQAFIMMVNLLENR--GMGDLFSSGFDTLLKAFDMLKHE 294
Query: 241 LTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWD-IYLLDGER 293
L+ + RH + G + ++ +W+ F + VPF LR+WD ++LL G +
Sbjct: 295 LS--FTQSGRHLAEIGAEPSAFATRWYLTVFHQCVPFHTQLRIWDLLFLLGGSK 346
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 89.0 bits (211), Expect = 2e-18
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 3/166 (1%)
Query: 159 ERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMDEEDAFWALAVLLSDKKYA 218
+ +E +L VL + ++ +VGY QGMS +AG LLM++ AF AL V L K Y
Sbjct: 676 DNIAESTANLHRVLRSLAIVLPQVGYTQGMSWIAGALLMHLPAPQAF-ALLVFLF-KNYH 733
Query: 219 MHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFS 278
+ ++ L+R L +++ +MP L HF + + Y+ +WF F + P
Sbjct: 734 LQNIFSSEMRGLSRVLHQFTRLVEDYMPSLAIHFKRQDIKTCSYASEWFLTLFAYKFPLE 793
Query: 279 LCLRVWDIYLLDGERVITAMAYTILKLHKKTIMKLNDMDLIVNYIQ 324
+ ++DI L G ++ +L +++++KLN MD +++Y++
Sbjct: 794 VVAHLYDILFLYGPGILFNFGLALLSHSQESLLKLN-MDRLISYLK 838
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 85.0 bits (201), Expect = 3e-17
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 9/252 (3%)
Query: 68 IELEREKKWLKMLEEWGTSET---KQKLHRRIYKGIPNSLRIGVWSKLLDVNRMRSDNPG 124
I K W++ L++ G + + + GIPN+LR +W R + G
Sbjct: 182 INENNSKSWIQYLKKNGANFNLIQTPNFQKLVQSGIPNNLRADIWETCSGSLFPRWKSKG 241
Query: 125 KYREML-KLAKLWSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVG 183
Y + + + +I+ D+ R ++ Y+ +L +L YS N EVG
Sbjct: 242 FYAKNIDSVINNRCEYSEEIEKDLTRSLPDYPAYQSPTGIN--TLRRILLFYSETNKEVG 299
Query: 184 YCQGMSGLAGVLLMYMDEEDAFWALAVLLSDKKYAMHGLYIEGFPKLTRFLEHHDKILTK 243
YCQ M+ + LL+Y EE A++ + L ++ + G Y + L L + +L
Sbjct: 300 YCQAMNIVLAALLVYCTEEQAYFLFSQLC---EFYIPGYYAKIIHGLLLDLTVFEYVLEH 356
Query: 244 FMPKLKRHFDKFGLDAILYSLKWFFVCFVERVPFSLCLRVWDIYLLDGERVITAMAYTIL 303
+P L + + +D L ++ WFF F++ R+ D ++G RV+ +A +
Sbjct: 357 TLPHLYQKIIELDMDLKLITINWFFSLFIKDFRLDYAFRILDCLFVNGPRVLFQVALALF 416
Query: 304 KLHKKTIMKLND 315
K++ + I+ D
Sbjct: 417 KVNAQGILNATD 428
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 80.2 bits (189), Expect = 8e-16
Identities = 75/291 (25%), Positives = 117/291 (40%), Gaps = 38/291 (13%)
Query: 72 REKKWLKMLEEWGTSETKQ----------KLHRRIYKGIPNSLRIGVWSKLLDVNRMRSD 121
RE++W L+E G Q K R I KGIP R W +
Sbjct: 263 REQRWKLFLQENGIDYIHQSPSIFPSRSAKTQRFIRKGIPPEYRGNAWFYYSGGYELLQR 322
Query: 122 NPGKYREMLKLAKLWS-TDVRQIDSDVNRQFREHQFYRERYSEKQCS------------- 167
NP Y + + A + +D I+ D+ R F ++ +R + + S
Sbjct: 323 NPKLYETLWRCACIKKPSDSDLIERDLYRTFPDNVHFRHKSKHSRNSSDASEHSSEEPDV 382
Query: 168 -----LFNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMDEEDAFWALAVLLSDKKYAMHGL 222
L VL ++ Y E GYCQ ++ LAG L++M EE AFW L + MH
Sbjct: 383 PMISKLRRVLMTFATYLPENGYCQSLNFLAGFFLLFMSEEKAFWMLVITCRKYLPKMHDA 442
Query: 223 YIEGFP-KLTRFLEHHDKILTKFMPKLKRHFDKFGLDAI--------LYSLKWFFVCFVE 273
+EG + + + L ++ +FD ++ I L + WF FV
Sbjct: 443 NLEGANIDQSVLMASVRESLPAVWSRISLNFDGIPVNDIVAKLPPITLVTAAWFMSAFVG 502
Query: 274 RVPFSLCLRVWDIYLLDGERVITAMAYTILKLHKKTIMKLNDMDLIVNYIQ 324
+P LRVWD + +G +V+ A IL+L + I ++ + IQ
Sbjct: 503 ILPTETALRVWDCFFYEGSKVLFMTALCILRLGEDDIKSKSEQTEVFQVIQ 553
>SPAC630.05 |gyp7||GTPase activating protein Gyp7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 52.8 bits (121), Expect = 1e-07
Identities = 74/350 (21%), Positives = 145/350 (41%), Gaps = 60/350 (17%)
Query: 17 IFQRYERGRENLVGLIDPWEDPEFEEYHKTDRYGFIHDERLPQKTAPQKINIELEREKKW 76
I ++ E V W D + EE + ++ E ++ P + ++W
Sbjct: 334 IVEQSESNNSQPVNNAGVWTDAQREEDSSLGPFELVYIEERVKRDDPLSV-------EQW 386
Query: 77 LKMLEEWGTSETKQKLHRRI----YKGIPNSLRIGVWSKLLDVNRMRSDNPGK------- 125
M G + +HR + + GI SLR VW LL V S + +
Sbjct: 387 NSMFNAHGKLQVD--VHRVLGIIFHGGIQPSLRKEVWPFLLSVYPWDSTSEERRVIYLSL 444
Query: 126 YREMLKLAKLWSTDVRQ-------------IDSDVNRQFREHQFYRER---YSEKQCS-- 167
E L + W D+ + I+ DV+R R+H++++ + + Q +
Sbjct: 445 QEEYCTLKRKWYEDIHKQFNDRWFIEQRNRIEKDVHRTDRQHEYFQIEDLPHPDPQSTFT 504
Query: 168 --------LFNVLCAYSLYNSEVGYCQGMSG-LAGVLLMYMDEEDAFWALAVLLSDKKYA 218
+ ++L Y+ Y++E+GY QGMS LA + + + D FW + L+
Sbjct: 505 GTNMNMEMMKDILLTYNEYDTELGYVQGMSDLLAPIYVTFNDNALTFWGMVGLMK----R 560
Query: 219 MHGLYIEGFPKLTRFLEHHDKILTKFM-PKLKRHFDKFGLDAILYSLKWFFVCFVERVPF 277
+H ++ + R L+ ++L +FM P+L H +K + + + F +
Sbjct: 561 LHFNFLRDQSGMHRQLDTL-RLLIEFMDPELFAHLEKTDSSNLFCFFRMLLIYFKREFDW 619
Query: 278 SLCLRVWDI----YLLDGERVITAMAYTILKLHKKTIM-KLNDMDLIVNY 322
+ L++WD+ YL + +AY I + H++ ++ + + D ++ Y
Sbjct: 620 EVLLKLWDVLFTNYLSYDYHIF--VAYAIAERHREVLLNQTSAFDEVLKY 667
>SPBC530.01 |gyp1||GTPase activating protein Gyp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 201 EEDAFWALAVLLSDKKYAMHGLYIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAI 260
E DA+W L+ LL + YI P + R + + ++ + L +H G+D +
Sbjct: 357 EADAYWCLSKLLD----GIQDNYIHAQPGIRRQVNNLRELTLRIDEPLVKHLQMEGVDFL 412
Query: 261 LYSLKWFFVCFVERVPFSLCLRVWDIYLLDG 291
+S +W + + S +R+WD Y+ +G
Sbjct: 413 QFSFRWMNCLLMRELSISNIIRMWDTYMAEG 443
>SPAC6F6.08c |cdc16|bub2|two-component GAP Cdc16|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 299
Score = 37.9 bits (84), Expect = 0.004
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 12/195 (6%)
Query: 98 KGIPNSLRIGVWSKLLDVNRMRSDNPGKYREMLKLAKLWSTDVRQIDSDVNRQFREHQFY 157
+G +S R VW+ LL+ +D +Y + + S ++I +DV+R +
Sbjct: 40 EGGNSSTRPYVWAVLLNAPPRNADEYIRY-----VRQGPSPMAQKIQNDVSRTLVVESQF 94
Query: 158 RERYSEKQCSLFNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMDEEDAFWALAVLLSDKKY 217
R S Q SL +L AY ++ Y QGM+ LA L E+ + L +
Sbjct: 95 HSRVS--QSSLSRLLNAY-VWKRGALYVQGMNVLASPFLYACKSENQAFQFFDRLLQNEC 151
Query: 218 AMHGL-YIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFVCFVERVP 276
++ L I+G + + L DK L +L + GL A +Y+L P
Sbjct: 152 PLYVLPNIDGVHRGAKLL---DKCLEVLDHRLYTYLLSKGLTAKIYALPSILTLSACTAP 208
Query: 277 FSLCLRVWDIYLLDG 291
S L +WD G
Sbjct: 209 LSEALTIWDFLFAYG 223
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 35.9 bits (79), Expect = 0.016
Identities = 21/71 (29%), Positives = 29/71 (40%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSPKKYKTYTDDHLKP 558
AP T+H T PP+ + VV N T P H + T T+ + P
Sbjct: 109 APPTTHVNSTTTVVPPTTHVNTTTVVPPTTHVNTTTVVPPTTHANTTSFVPTTTESSIHP 168
Query: 559 ISLGFYTSNGT 569
I+ GFY + T
Sbjct: 169 ITTGFYNTTFT 179
>SPAC1952.17c ||SPAC890.01c|GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 619
Score = 35.5 bits (78), Expect = 0.022
Identities = 25/132 (18%), Positives = 54/132 (40%), Gaps = 12/132 (9%)
Query: 171 VLCAYSLYNSEVGYCQGMSGLAGVLLMYMDEEDAFWALAVLLSDKKYAMHGLYIEGFPKL 230
+L Y+ N +GY QGM+ + L + + + + D + + ++
Sbjct: 255 ILFIYAKLNPGIGYVQGMNEILAPLYYVLATDPTYENYYLCECDAFFLFTQMMVQVRDLY 314
Query: 231 TRFLEHHDK-----ILTKFMPKLKRH-------FDKFGLDAILYSLKWFFVCFVERVPFS 278
+ L+H +++KF +LK++ ++ + YS +WF + P
Sbjct: 315 EKTLDHDSDHGIHFLMSKFTERLKKYDYELWENLEEKQIHPTYYSFRWFTCLLSQEFPLP 374
Query: 279 LCLRVWDIYLLD 290
+R+WD + D
Sbjct: 375 DVIRLWDSIIAD 386
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 33.9 bits (74), Expect = 0.066
Identities = 38/188 (20%), Positives = 71/188 (37%), Gaps = 5/188 (2%)
Query: 417 SQSDTVSEHSGLASGVRCDDSVSGLGSRRSLADTSVTSTADLSVFSSGRSHAPDNSLDTH 476
S S +S + S S S S S A TS S+ S+ SS + +
Sbjct: 575 SVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSS 634
Query: 477 SNVXXXXXXXXXXXVCGMSIQRAPSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTAS 536
+ + SI P +S + ++ PS+S + + V+ +P+ +S
Sbjct: 635 LMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASS 694
Query: 537 PSHLHPVSPKKYKTYTD--DHLKPISLGFYTSNGTNNVP---SDNRIRIQVPSEDLLTPV 591
S P S TY+ ++ SL + ++ +P + + + S LL+ +
Sbjct: 695 SSSPIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTSVNSSTLITASSSNTLLSSI 754
Query: 592 VDSGRIIN 599
S I++
Sbjct: 755 TSSSAIVS 762
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 31.5 bits (68), Expect = 0.35
Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 20/196 (10%)
Query: 377 DKKSKIGQRAENFSETEKQARANVILRREKAALELQELRVSQSDTVSEHSGLASGVRCDD 436
+K + +E+F+ + R + ++A+ + +LR Q + E A R ++
Sbjct: 473 NKVEIVSDSSESFAHKNNEKRFD-----KEASGRINDLRAEQQQIMLEARQKAIERRRNE 527
Query: 437 SVSGLGSRRSLADTSVTSTADLSVFSSGRSHAPDNSLDTHSNVXXXXXXXXXXXVCGMSI 496
SR + + ++ + SS + +P + + SNV SI
Sbjct: 528 EEELARSR----ERARKKAEEIKISSSKMNSSPTITNERSSNVESSKKVEAIYTKEPQSI 583
Query: 497 QRAPSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSPKKYK-TYTDDH 555
+P HS T PS SP D PL+ SH HP+ P + +T D
Sbjct: 584 TNSPEGLHSNQETTEIDPS-SPRDDS--------TPLSWR-SHSHPIPPVQVSPLFTSDK 633
Query: 556 LKPISLGFYTSNGTNN 571
P+ L + + T++
Sbjct: 634 NDPLQLNPQSDDSTSS 649
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 30.7 bits (66), Expect = 0.62
Identities = 41/181 (22%), Positives = 65/181 (35%), Gaps = 4/181 (2%)
Query: 342 LEKSMEELKRAKLDYPGLPPPN-ELPKRPLGVFVEPDKKSKIGQRAENFSETEKQARANV 400
LEKS ++ + K+ G PP G D+ +E+ SE + ++
Sbjct: 76 LEKSNDDSQ--KISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSS 133
Query: 401 ILRREKAALELQELRVSQSDTVSEHSGLASGVRCDDSVSGLGSRRSLADTSVTSTADLSV 460
E ++ E + S SD+ SE S S S S S D+S +S+ S
Sbjct: 134 DSESESSS-EDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESE 192
Query: 461 FSSGRSHAPDNSLDTHSNVXXXXXXXXXXXVCGMSIQRAPSTSHSTPRATPHPPSASPMS 520
SS S + +S D+ S S + S+ + S+S S
Sbjct: 193 SSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDS 252
Query: 521 D 521
D
Sbjct: 253 D 253
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.3 bits (65), Expect = 0.82
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 108 VWSKLLDVNRMRSDNPGKYREM----LKLAKLWSTDVRQIDSDVNRQFREHQFYRERYSE 163
V SK D+ R+ N K ++ KLA W T Q+ VN+ +H R++ S+
Sbjct: 1350 VKSKSEDLENERAQNQSKIEQLELKNTKLAAAWRTKYEQV---VNKSLEKHNQIRQQLSQ 1406
Query: 164 KQCSL 168
K L
Sbjct: 1407 KTSEL 1411
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 30.3 bits (65), Expect = 0.82
Identities = 26/122 (21%), Positives = 47/122 (38%)
Query: 417 SQSDTVSEHSGLASGVRCDDSVSGLGSRRSLADTSVTSTADLSVFSSGRSHAPDNSLDTH 476
S S + S S + S S S S + +S +S++ S SS S + +S +
Sbjct: 137 SSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 196
Query: 477 SNVXXXXXXXXXXXVCGMSIQRAPSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTAS 536
S+ S + S+S S+ ++ PS+S + + +T +
Sbjct: 197 SSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVT 256
Query: 537 PS 538
PS
Sbjct: 257 PS 258
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 115 VNRMRSDNPGKYREMLKLAKLWSTDVRQIDSDVNRQFREHQFYRERYSEKQ 165
V+R DN G M+++ +W VR + S +Q + F+ + + KQ
Sbjct: 412 VSRNAQDNMGMLAYMIRMVSIWGRVVRCLKSYSQKQSNPYPFWHAKSTFKQ 462
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Query: 167 SLFNVLCAYSLYNSEVGYCQGMSGLAGVLLMYMDEEDAFWALAVLLSDKKYAMHGLYIEG 226
S F +L + S G C+ + G+ + L+Y+ E+ + W +++L + ++ G
Sbjct: 544 SSFWILNPFVAIISTRGNCEAILGILSIALLYLIEKKSVWLASLILGFSVHFKIYPFMYG 603
Query: 227 FPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAILYSLKWFFVC 270
L F + K + FM K L ++ SL F +C
Sbjct: 604 IAFLVYFSK--PKKGSTFMEKFLSLLSINQLKIVVGSLFMFTIC 645
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1582 SPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSP--TSPSY-SPTSP 1625
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1603 SPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1646
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1610 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1653
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1617 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1660
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1624 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1667
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1631 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1674
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1681
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1645 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1688
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1652 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1695
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1659 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1702
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1666 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1709
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1673 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1716
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1680 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1723
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1687 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1730
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1694 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1737
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1701 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1744
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 499 APSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSP 545
+PS S ++P +P PS SP S +Y+P SPS+ P SP
Sbjct: 1708 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSY-SPTSP 1751
>SPBC651.03c |gyp10||GTPase activating protein
Gyp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 373
Score = 29.1 bits (62), Expect = 1.9
Identities = 47/261 (18%), Positives = 103/261 (39%), Gaps = 15/261 (5%)
Query: 69 ELEREKKWLKMLEEWGTSETKQKLHRRIYKGIPNSLRIGVWSKLLDVN-RMRSDNPGKYR 127
E+++ K +K+ ET + + + + SLR VW L ++ R R + +
Sbjct: 5 EIKQLKNEIKIALLNSDVETLSHIGKEGHGFLMKSLRKSVWVSLCGLSCRHRMECLSRST 64
Query: 128 EMLKLAKLWSTDVRQIDSDVNRQFREHQFYRERYSEKQCSLFNVLCAYSLYNSEVGYCQG 187
A D Q+ D R F +++ + + L +L + E+ Y QG
Sbjct: 65 SQSSYA-----DQNQVHLDSERSFFQYKLNPFLLRKHRSQLTKLLSVVFKHYPELCYYQG 119
Query: 188 MSGLAGVLLMYMDEEDAFWALAVLLSDKKYAMHGLYIEGFPKLTRFLEHHDKILTKFMPK 247
+ +A +LL+ + A + L+ Y + + + L+ ++ P
Sbjct: 120 LHDIAQILLLTLPFSHALPLMEHLVF---YRLRDFMLPTLDGTVKQLQLILAVIKARDPT 176
Query: 248 LKRHFDKFGLDAILYSLKWFFVCFVERV-PFSLCLRVWDIYLLDGERVITAMAYTILKLH 306
L + K + ++L W F V S+ R++D ++ + ++ +
Sbjct: 177 LYEYLIKADIQC-YFALSWLITWFAHDVSDISVVCRLFDFFISSHPLTVVYTCAQVVLDN 235
Query: 307 KKTIMKL----NDMDLIVNYI 323
+ +I++L + DL+ +Y+
Sbjct: 236 RTSIIELLWDNSGADLLHSYL 256
>SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 845
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 493 GMSIQRAPSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSH 539
G+S +T+ T +P PP S +D+ +R+ + Y P + P +
Sbjct: 274 GVSRSLNDATNMETYHWSPFPPQFSTFNDNALRLRIYYKPKSWLPKN 320
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 1.9
Identities = 30/130 (23%), Positives = 44/130 (33%)
Query: 425 HSGLASGVRCDDSVSGLGSRRSLADTSVTSTADLSVFSSGRSHAPDNSLDTHSNVXXXXX 484
+SG S S+ G + S TS +ST S SS S + +S + S+
Sbjct: 123 YSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSS 182
Query: 485 XXXXXXVCGMSIQRAPSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVS 544
S S+S S+ + PS+S S + AS S +
Sbjct: 183 SSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTTPASSSSSGAIV 242
Query: 545 PKKYKTYTDD 554
TDD
Sbjct: 243 SNAKTASTDD 252
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 495 SIQRAPSTSHSTPRATPHPPSASPMSDDVVRIHV-TYNPLTASPSHLHPVSPKKYK 549
S Q +PS + S P+AT SP S V IH+ + + L + S + P+ YK
Sbjct: 177 SSQSSPSVNESEPKATEDLDELSPGSYKVKEIHIRSPSNLIEAISDMSLDEPRIYK 232
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 28.3 bits (60), Expect = 3.3
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 425 HSGLASGVRCDDSVSGLGSRRSLADTSVTSTAD--------LSVFSSGRSHAPDNSLDTH 476
+S + S ++ + ++S S +SV+S+ D +S SSG+ H SL TH
Sbjct: 122 NSSITSKLQNNSNLSVTSSANRGRTSSVSSSYDPSFPWGPRMSSVSSGKQHLSSLSLHTH 181
Query: 477 SNVXXXXXXXXXXXVCGMSIQRAPSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTAS 536
N S Q+APS+S + ATP ++ +S+ + T++ A+
Sbjct: 182 FNPSSSSTVSSDS--LESSQQKAPSSSST---ATPASAASEIISNKDPVVEPTHSASNAA 236
Query: 537 PS 538
S
Sbjct: 237 NS 238
>SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 608
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 451 SVTSTADLSVFSSGRSHAP-DNSLDTHSNVXXXXXXXXXXXVCGMSIQRAPSTSHSTPRA 509
S T +D S + A +SL+T S + V S+ R P+ + + P+
Sbjct: 370 SNTFASDFSKVDRDATQAALSSSLETPSVLTSSYKPSSSSKVSAKSVSRKPTGAPAIPKL 429
Query: 510 TPHPPSASP 518
P PS P
Sbjct: 430 PPKHPSRQP 438
>SPCC4G3.17 |||HD domain|Schizosaccharomyces pombe|chr 3|||Manual
Length = 198
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 26 ENLVGLIDPWEDPEFEEYHKTDRYGFIHDERLPQKTAPQKINIELEREKKWLKMLEEWGT 85
E++VG I P E+ EE H+ + + + Q+ P ++++ E K+ E T
Sbjct: 73 ESIVGDITPHENVSKEEKHRMESEAMV---SITQQLIPLNLSLQAEEIKELFLEYESAST 129
Query: 86 SETK 89
E K
Sbjct: 130 PEAK 133
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.9 bits (59), Expect = 4.4
Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 5/142 (3%)
Query: 437 SVSGLGSRRSLADTSVTSTADLSVFSSGRSHAPDNSLD-THSN---VXXXXXXXXXXXVC 492
+ S + SLA +S+ ST + SS S +S T SN
Sbjct: 217 AASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQY 276
Query: 493 GMSIQRAPSTSHSTPRATPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSPKKYKTYT 552
S ST STP ++ + +A+ S + + +AS + L VS T T
Sbjct: 277 NTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTAT 336
Query: 553 DDHLKPI-SLGFYTSNGTNNVP 573
P+ S+ T+ ++ P
Sbjct: 337 STSSTPLSSVNSTTATSASSTP 358
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 377 DKKSKIGQRAENFSETEKQARANVILRREKAALELQELRVSQSDTVSEHSGLASGVRCDD 436
+ K + + EN E+ K+ + +++L RE+A L+ EL + D +E +S + +
Sbjct: 90 ESKDRRPKYMENLIESAKKRKRDLLLARERALLKKNEL---EGDDATEKFVTSSYKKHRE 146
Query: 437 SV-SGLGSRRSLADTSVTST 455
V + R+ + S+T T
Sbjct: 147 EVQKAIEDRKEEDEKSITDT 166
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 317 DLIVNYIQVKLHKDFGYEDDIVIY------QLEKSMEELKRAKLDYPGLPPPNELPKRPL 370
+L +I +LH+D + ++ + Q+E EE ++ ++ P P + RP
Sbjct: 518 NLFREFIDAELHRDLKFRQNLDVVRSEAKKQIEAQREEARKGNVNMPSALSPLRIRSRPS 577
Query: 371 GVFVEPD 377
+ + P+
Sbjct: 578 PLSLPPE 584
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/55 (30%), Positives = 22/55 (40%)
Query: 530 YNPLTASPSHLHPVSPKKYKTYTDDHLKPISLGFYTSNGTNNVPSDNRIRIQVPS 584
+N T SP P S Y D + I+ YTSN N DN + P+
Sbjct: 277 HNVETTSPPSSSPNSDDAYSPQVDSYSPSINSVPYTSNIVENPSEDNLSPLPPPA 331
>SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 327
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 223 YIEGFPKLTRFLEHHDKILTKFMPKLKRHFDKFGLDAIL 261
++E T F ++ +K L + P + R DKFG+ +L
Sbjct: 48 FLEESSFATLFPKYREKYLREVWPHVTRALDKFGITCVL 86
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 510 TPHPPSASPMSDDVVRIHVTYNPLTASPSHLHPVSPKKYKTYTDDHLKP 558
T + + S SDD IH Y P + P+ P P + T + KP
Sbjct: 498 TGYRDTGSCTSDDEDSIHEPYRPASTQPTENPPAMPDHNGSPTTEPPKP 546
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,969,994
Number of Sequences: 5004
Number of extensions: 137893
Number of successful extensions: 494
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 425
Number of HSP's gapped (non-prelim): 65
length of query: 613
length of database: 2,362,478
effective HSP length: 77
effective length of query: 536
effective length of database: 1,977,170
effective search space: 1059763120
effective search space used: 1059763120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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