GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000511-TA|BGIBMGA000511-PA|IPR002347|Glucose/ribitol
dehydrogenase, IPR002198|Short-chain dehydrogenase/reductase SDR
         (255 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    27   0.53 
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    27   0.53 
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    26   1.2  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    25   1.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   1.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   3.7  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   6.5  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   8.6  

>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 184 GIRVVTIAPGLFRTPMMEQLPEPA 207
           G ++  I+PG F+T MM  +PE A
Sbjct: 209 GRKIFEISPGTFKTMMMNGMPELA 232


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 23  LLVKQGGRV--VICDLPSTKGQN-TAKSLGE--NAVFAPVDV-TSEDDVKEALQITLDKF 76
           LL+KQG     V+  +    G++ TA+ + +    +   +D+  +E D+++ALQI L+K 
Sbjct: 120 LLLKQGADAGAVLGKIHEAVGESGTARVVADMGEVIIPNIDMLATEADIRKALQIALEKE 179

Query: 77  GRLDALIN 84
             L ALIN
Sbjct: 180 AML-ALIN 186


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
          precursor protein.
          Length = 260

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 5  LVALVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTAK 46
          L+ +V  G S  GK  +  L  +GG  V C+ PS+ G  T +
Sbjct: 10 LLLVVLSGVSAGGKYCSSDLCPRGGPHVGCNPPSSSGGPTCQ 51


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 1   MFKGLVALVTGGSSGLGKATAELLVKQGGRVVICDL 36
           M  G V +V G    +GK  A+ L   GGRV+I ++
Sbjct: 210 MIAGKVCVVAGYGD-VGKGCAQALRGSGGRVLITEI 244


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 1/102 (0%)

Query: 138 DGQRGVVINTASVAAFDGQI-GQAAYSASKAGVVGMTLPLARDMAKQGIRVVTIAPGLFR 196
           D   G V    S     G I G   ++    GV G+ LPL  ++      +V + PG   
Sbjct: 687 DTSEGPVERHISAGVPQGSILGPTLWNMMYDGVFGVGLPLGAEIIGYADDLVLLVPGTTP 746

Query: 197 TPMMEQLPEPAIKSLEASVPFPSRLGHPQEFALLVQSIIQNP 238
           T       E      +  +     L H +    ++ S+ Q P
Sbjct: 747 TTAAAAAEEAVAAVKQWLLEHRLELAHSKTEMTVISSLKQPP 788


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 205 EPAIKSLEASVPFPSRLGHPQEFA-LLVQSIIQNP 238
           E +I   E++ P P+ LG P  FA   V S +Q P
Sbjct: 41  ERSISGTESTKPVPTVLGGPNLFAPSAVSSQLQRP 75


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)

Query: 2   FKGLVALVTGGSSGLG 17
           F GLV  + GG SGLG
Sbjct: 437 FSGLVGALGGGLSGLG 452


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 157 IGQAAYSASKAGVVGMTLPLARDMAKQGIRVVTIAPGLFRTPMMEQ-LPEPAIKSLEASV 215
           +G   ++    GV+G+ LP   ++      +V +APG   TP     + E A+ +++  +
Sbjct: 646 LGPTLWNVMYDGVLGVELPPGAELIGYADDLVLLAPG--TTPAAAAVVAEEAVSAVDRWL 703

Query: 216 -PFPSRLGHPQEFALLVQSIIQNP 238
                 L H +    ++ S+ Q P
Sbjct: 704 REHHLELAHAKTEMTVISSLQQPP 727


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.135    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,591
Number of Sequences: 2123
Number of extensions: 8931
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 9
length of query: 255
length of database: 516,269
effective HSP length: 63
effective length of query: 192
effective length of database: 382,520
effective search space: 73443840
effective search space used: 73443840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)