Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000509-TA|BGIBMGA000509-PA|undefined
         (888 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130630-1|AAI30631.1|  830|Homo sapiens PHC2 protein protein.         51   2e-05
BC110863-1|AAI10864.2|  323|Homo sapiens polyhomeotic homolog 2 ...    51   2e-05
BC092492-1|AAH92492.1|  405|Homo sapiens PHC2 protein protein.         51   2e-05
BC068573-1|AAH68573.1|  405|Homo sapiens PHC2 protein protein.         51   2e-05
BC029269-1|AAH29269.1|  323|Homo sapiens polyhomeotic homolog 2 ...    51   2e-05
BC028396-1|AAH28396.3|  323|Homo sapiens polyhomeotic homolog 2 ...    51   2e-05
AL513327-5|CAI13957.1|  858|Homo sapiens polyhomeotic homolog 2 ...    51   2e-05
AL513327-4|CAI13956.1|  464|Homo sapiens polyhomeotic homolog 2 ...    51   2e-05
AL513327-3|CAI13955.1|  323|Homo sapiens polyhomeotic homolog 2 ...    51   2e-05
AJ419231-1|CAD11673.1|  858|Homo sapiens polyhomeotic 2 protein.       51   2e-05
BC131772-1|AAI31773.1|  983|Homo sapiens PHC3 protein protein.         50   3e-05
AJ320486-1|CAC86587.2|  983|Homo sapiens homolog of polyhomeotic...    50   3e-05
AF444193-1|AAM51781.1|  983|Homo sapiens polyhomeotic 3 protein ...    50   3e-05
AF380154-1|AAM46139.1|  964|Homo sapiens early development regul...    50   3e-05
BX640639-1|CAE45787.1|  610|Homo sapiens hypothetical protein pr...    49   8e-05
BC073964-1|AAH73964.1|  957|Homo sapiens PHC1 protein protein.         49   8e-05
BC017748-1|AAH17748.1|  447|Homo sapiens PHC1 protein protein.         49   8e-05
BC002871-1|AAH02871.2|  481|Homo sapiens PHC1 protein protein.         49   8e-05
AB209063-1|BAD92300.1| 1099|Homo sapiens Polyhomeotic-like prote...    49   8e-05
U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog pr...    48   2e-04
U89278-1|AAC51170.1|  433|Homo sapiens polyhomeotic 2 homolog pr...    41   0.017
AF087888-1|AAP97187.1|  269|Homo sapiens WW-domain binding prote...    34   1.9  
CR381696-3|CAI95411.1|  266|Homo sapiens dehydrogenase/reductase...    34   2.5  
BX649443-3|CAI95432.1|  266|Homo sapiens dehydrogenase/reductase...    34   2.5  
AF453950-1|AAL41025.1|  389|Homo sapiens unknown protein.              33   4.5  
AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation ...    33   4.5  
BC030578-1|AAH30578.1|  515|Homo sapiens EIF4G3 protein protein.       32   7.8  
AL672037-2|CAI16194.1|  630|Homo sapiens eukaryotic translation ...    32   7.8  
AL627311-2|CAI14553.1| 1585|Homo sapiens eukaryotic translation ...    32   7.8  
AL627311-1|CAI14552.1|  630|Homo sapiens eukaryotic translation ...    32   7.8  
AL606477-7|CAI12534.1| 1585|Homo sapiens eukaryotic translation ...    32   7.8  
AL358392-2|CAI12155.1| 1585|Homo sapiens eukaryotic translation ...    32   7.8  
AL358392-1|CAI12154.1|  630|Homo sapiens eukaryotic translation ...    32   7.8  
AF012072-1|AAC02903.2| 1585|Homo sapiens eIF4GII protein.              32   7.8  

>BC130630-1|AAI30631.1|  830|Homo sapiens PHC2 protein protein.
          Length = 830

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 836 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           P+A+VKP ILTHVIEG+VIQE  EPF V R
Sbjct: 532 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 561


>BC110863-1|AAI10864.2|  323|Homo sapiens polyhomeotic homolog 2
           (Drosophila) protein.
          Length = 323

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 836 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           P+A+VKP ILTHVIEG+VIQE  EPF V R
Sbjct: 25  PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 54


>BC092492-1|AAH92492.1|  405|Homo sapiens PHC2 protein protein.
          Length = 405

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 836 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           P+A+VKP ILTHVIEG+VIQE  EPF V R
Sbjct: 107 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 136


>BC068573-1|AAH68573.1|  405|Homo sapiens PHC2 protein protein.
          Length = 405

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 836 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           P+A+VKP ILTHVIEG+VIQE  EPF V R
Sbjct: 107 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 136


>BC029269-1|AAH29269.1|  323|Homo sapiens polyhomeotic homolog 2
           (Drosophila) protein.
          Length = 323

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 836 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           P+A+VKP ILTHVIEG+VIQE  EPF V R
Sbjct: 25  PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 54


>BC028396-1|AAH28396.3|  323|Homo sapiens polyhomeotic homolog 2
           (Drosophila) protein.
          Length = 323

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 836 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           P+A+VKP ILTHVIEG+VIQE  EPF V R
Sbjct: 25  PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 54


>AL513327-5|CAI13957.1|  858|Homo sapiens polyhomeotic homolog 2
           (Drosophila) protein.
          Length = 858

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 836 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           P+A+VKP ILTHVIEG+VIQE  EPF V R
Sbjct: 560 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 589


>AL513327-4|CAI13956.1|  464|Homo sapiens polyhomeotic homolog 2
           (Drosophila) protein.
          Length = 464

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 836 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           P+A+VKP ILTHVIEG+VIQE  EPF V R
Sbjct: 166 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 195


>AL513327-3|CAI13955.1|  323|Homo sapiens polyhomeotic homolog 2
           (Drosophila) protein.
          Length = 323

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 836 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           P+A+VKP ILTHVIEG+VIQE  EPF V R
Sbjct: 25  PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 54


>AJ419231-1|CAD11673.1|  858|Homo sapiens polyhomeotic 2 protein.
          Length = 858

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 836 PKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           P+A+VKP ILTHVIEG+VIQE  EPF V R
Sbjct: 560 PQAIVKPQILTHVIEGFVIQEGAEPFPVGR 589


>BC131772-1|AAI31773.1|  983|Homo sapiens PHC3 protein protein.
          Length = 983

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 1/45 (2%)

Query: 821 TPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           T  H S  +  +K  P+A+VKP ILTHVIEG+VIQE  EPF V+R
Sbjct: 679 TSMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEGLEPFPVSR 722


>AJ320486-1|CAC86587.2|  983|Homo sapiens homolog of polyhomeotic 3
           protein.
          Length = 983

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 1/45 (2%)

Query: 821 TPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           T  H S  +  +K  P+A+VKP ILTHVIEG+VIQE  EPF V+R
Sbjct: 679 TSMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEGLEPFPVSR 722


>AF444193-1|AAM51781.1|  983|Homo sapiens polyhomeotic 3 protein
           protein.
          Length = 983

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 1/45 (2%)

Query: 821 TPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           T  H S  +  +K  P+A+VKP ILTHVIEG+VIQE  EPF V+R
Sbjct: 679 TSMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEGLEPFPVSR 722


>AF380154-1|AAM46139.1|  964|Homo sapiens early development
           regulator 3 protein.
          Length = 964

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 1/45 (2%)

Query: 821 TPRHISQAAAHDKGLPKAMVKPNILTHVIEGYVIQEAGEPFAVNR 865
           T  H S  +  +K  P+A+VKP ILTHVIEG+VIQE  EPF V+R
Sbjct: 660 TSMHSSIPSIENKP-PQAIVKPQILTHVIEGFVIQEGLEPFPVSR 703


>BX640639-1|CAE45787.1|  610|Homo sapiens hypothetical protein
           protein.
          Length = 610

 Score = 48.8 bits (111), Expect = 8e-05
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 832 DKGLPKAMVKPNILTHVIEGYVIQEAGEPFAV 863
           D   P+A+VKP ILTH+IEG+VIQE  EPF V
Sbjct: 327 DSKPPQAIVKPQILTHIIEGFVIQEGAEPFPV 358


>BC073964-1|AAH73964.1|  957|Homo sapiens PHC1 protein protein.
          Length = 957

 Score = 48.8 bits (111), Expect = 8e-05
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 832 DKGLPKAMVKPNILTHVIEGYVIQEAGEPFAV 863
           D   P+A+VKP ILTH+IEG+VIQE  EPF V
Sbjct: 674 DSKPPQAIVKPQILTHIIEGFVIQEGAEPFPV 705


>BC017748-1|AAH17748.1|  447|Homo sapiens PHC1 protein protein.
          Length = 447

 Score = 48.8 bits (111), Expect = 8e-05
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 832 DKGLPKAMVKPNILTHVIEGYVIQEAGEPFAV 863
           D   P+A+VKP ILTH+IEG+VIQE  EPF V
Sbjct: 164 DSKPPQAIVKPQILTHIIEGFVIQEGAEPFPV 195


>BC002871-1|AAH02871.2|  481|Homo sapiens PHC1 protein protein.
          Length = 481

 Score = 48.8 bits (111), Expect = 8e-05
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 832 DKGLPKAMVKPNILTHVIEGYVIQEAGEPFAV 863
           D   P+A+VKP ILTH+IEG+VIQE  EPF V
Sbjct: 198 DSKPPQAIVKPQILTHIIEGFVIQEGAEPFPV 229


>AB209063-1|BAD92300.1| 1099|Homo sapiens Polyhomeotic-like protein
           1 variant protein.
          Length = 1099

 Score = 48.8 bits (111), Expect = 8e-05
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 832 DKGLPKAMVKPNILTHVIEGYVIQEAGEPFAV 863
           D   P+A+VKP ILTH+IEG+VIQE  EPF V
Sbjct: 816 DSKPPQAIVKPQILTHIIEGFVIQEGAEPFPV 847


>U89277-1|AAC51169.1| 1004|Homo sapiens polyhomeotic 1 homolog
           protein.
          Length = 1004

 Score = 47.6 bits (108), Expect = 2e-04
 Identities = 20/30 (66%), Positives = 24/30 (80%)

Query: 832 DKGLPKAMVKPNILTHVIEGYVIQEAGEPF 861
           D   P+A+VKP ILTH+IEG+VIQE  EPF
Sbjct: 721 DSKPPQAIVKPQILTHIIEGFVIQEGAEPF 750


>U89278-1|AAC51170.1|  433|Homo sapiens polyhomeotic 2 homolog
           protein.
          Length = 433

 Score = 41.1 bits (92), Expect = 0.017
 Identities = 17/24 (70%), Positives = 21/24 (87%)

Query: 836 PKAMVKPNILTHVIEGYVIQEAGE 859
           P+A+VKP ILTHVIEG+VIQE  +
Sbjct: 138 PQAIVKPQILTHVIEGFVIQEGAD 161


>AF087888-1|AAP97187.1|  269|Homo sapiens WW-domain binding protein
           1 protein.
          Length = 269

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 212 KQVLQGQAAPFPGYTTIPAIPTT--QNQTFVFSSNILPAHSQPT-VSGITQQQ 261
           + V+Q    P P YT  P  P T    QT   SS+  PAH + T V G++  Q
Sbjct: 128 EDVVQRPGTPHPPYTVAPGAPLTASSEQTCCSSSSSCPAHFEGTNVEGVSSHQ 180


>CR381696-3|CAI95411.1|  266|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 266

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 336 PQVWAGGL-QAGTLPAGGLLTPNPIFIRGTQPDAPPSMFIQHSPQNTVHHNSVSVACATP 394
           P+VW   L + G  P+       P  +  T P         H+P+   H  ++  AC  P
Sbjct: 32  PRVWPPRLSRVGLQPSSPRAAAPPRTL--TPPGHGRGPGGSHAPRPR-HQAALPAACGRP 88

Query: 395 TTAKPRASADGISKAPRPLSNILP 418
            TA+PR + +G S  PR L    P
Sbjct: 89  VTARPRQAPEGRSGRPRDLDPYPP 112


>BX649443-3|CAI95432.1|  266|Homo sapiens dehydrogenase/reductase
           (SDR family) X-linked protein.
          Length = 266

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 336 PQVWAGGL-QAGTLPAGGLLTPNPIFIRGTQPDAPPSMFIQHSPQNTVHHNSVSVACATP 394
           P+VW   L + G  P+       P  +  T P         H+P+   H  ++  AC  P
Sbjct: 32  PRVWPPRLSRVGLQPSSPRAAAPPRTL--TPPGHGRGPGGSHAPRPR-HQAALPAACGRP 88

Query: 395 TTAKPRASADGISKAPRPLSNILP 418
            TA+PR + +G S  PR L    P
Sbjct: 89  VTARPRQAPEGRSGRPRDLDPYPP 112


>AF453950-1|AAL41025.1|  389|Homo sapiens unknown protein.
          Length = 389

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 349 PAGGLLTPNPIFIRGTQPDAPPSMFIQHSPQNTVHHNSVSVACATPTTAKPRASADGISK 408
           P+   L P P F+  + P A P     H P +   H    V  ++PT  +P     G S 
Sbjct: 199 PSSMPLHPRP-FVHASSPTALPPCLFTHGPSSMPLHPRPFVHASSPTALRPCLFTHGPSS 257

Query: 409 A---PRPLSNILPSGGIRP 424
               PRP  +      +RP
Sbjct: 258 MPLHPRPFLHASSPTALRP 276


>AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 3 variant protein.
          Length = 1780

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 9/94 (9%)

Query: 348 LPAGGLLTPNPIFIRGTQPDAP---PSMFIQHSPQNTVHHNSVSVACATPTTA------K 398
           +  GG   P P   R T    P   PS   +HSP       S  +A +TP TA      +
Sbjct: 355 MSGGGSRNPTPPIGRPTSTPTPPQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQE 414

Query: 399 PRASADGISKAPRPLSNILPSGGIRPNSNVSTQT 432
            +   D + K+P P+  ++ SG  +     +++T
Sbjct: 415 EKPKPDPVLKSPSPVLRLVLSGEKKEQEGQTSET 448


>BC030578-1|AAH30578.1|  515|Homo sapiens EIF4G3 protein protein.
          Length = 515

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 348 LPAGGLLTPNPIFIRGTQPDAPP----SMFIQHSPQNTVHHNSVSVACATPTTA------ 397
           +  GG   P P   R T    PP    S   +HSP       S  +A +TP TA      
Sbjct: 170 ISGGGSRNPTPPIGRPTSTPTPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQ 229

Query: 398 KPRASADGISKAPRPLSNILPSGGIRPNSNVSTQT 432
           + +   D + K+P P+  ++ SG  +     +++T
Sbjct: 230 EEKPKPDPVLKSPSPVLRLVLSGEKKEQEGQTSET 264


>AL672037-2|CAI16194.1|  630|Homo sapiens eukaryotic translation
           initiation factor 4 gamma,udogene 1 protein.
          Length = 630

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 348 LPAGGLLTPNPIFIRGTQPDAPP----SMFIQHSPQNTVHHNSVSVACATPTTA------ 397
           +  GG   P P   R T    PP    S   +HSP       S  +A +TP TA      
Sbjct: 285 MSGGGSRNPTPPIGRPTSTPTPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQ 344

Query: 398 KPRASADGISKAPRPLSNILPSGGIRPNSNVSTQT 432
           + +   D + K+P P+  ++ SG  +     +++T
Sbjct: 345 EEKPKPDPVLKSPSPVLRLVLSGEKKEQEGQTSET 379


>AL627311-2|CAI14553.1| 1585|Homo sapiens eukaryotic translation
           initiation factor 4 gamma,actor receptor 3 (achondroplas
           protein.
          Length = 1585

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 348 LPAGGLLTPNPIFIRGTQPDAPP----SMFIQHSPQNTVHHNSVSVACATPTTA------ 397
           +  GG   P P   R T    PP    S   +HSP       S  +A +TP TA      
Sbjct: 159 MSGGGSRNPTPPIGRPTSTPTPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQ 218

Query: 398 KPRASADGISKAPRPLSNILPSGGIRPNSNVSTQT 432
           + +   D + K+P P+  ++ SG  +     +++T
Sbjct: 219 EEKPKPDPVLKSPSPVLRLVLSGEKKEQEGQTSET 253


>AL627311-1|CAI14552.1|  630|Homo sapiens eukaryotic translation
           initiation factor 4 gamma,-Asp/His) box polypeptide 11 (
           protein.
          Length = 630

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 348 LPAGGLLTPNPIFIRGTQPDAPP----SMFIQHSPQNTVHHNSVSVACATPTTA------ 397
           +  GG   P P   R T    PP    S   +HSP       S  +A +TP TA      
Sbjct: 285 MSGGGSRNPTPPIGRPTSTPTPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQ 344

Query: 398 KPRASADGISKAPRPLSNILPSGGIRPNSNVSTQT 432
           + +   D + K+P P+  ++ SG  +     +++T
Sbjct: 345 EEKPKPDPVLKSPSPVLRLVLSGEKKEQEGQTSET 379


>AL606477-7|CAI12534.1| 1585|Homo sapiens eukaryotic translation
           initiation factor 4 gamma,1 protein.
          Length = 1585

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 348 LPAGGLLTPNPIFIRGTQPDAPP----SMFIQHSPQNTVHHNSVSVACATPTTA------ 397
           +  GG   P P   R T    PP    S   +HSP       S  +A +TP TA      
Sbjct: 159 MSGGGSRNPTPPIGRPTSTPTPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQ 218

Query: 398 KPRASADGISKAPRPLSNILPSGGIRPNSNVSTQT 432
           + +   D + K+P P+  ++ SG  +     +++T
Sbjct: 219 EEKPKPDPVLKSPSPVLRLVLSGEKKEQEGQTSET 253


>AL358392-2|CAI12155.1| 1585|Homo sapiens eukaryotic translation
           initiation factor 4 gamma,fluid) protein.
          Length = 1585

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 348 LPAGGLLTPNPIFIRGTQPDAPP----SMFIQHSPQNTVHHNSVSVACATPTTA------ 397
           +  GG   P P   R T    PP    S   +HSP       S  +A +TP TA      
Sbjct: 159 MSGGGSRNPTPPIGRPTSTPTPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQ 218

Query: 398 KPRASADGISKAPRPLSNILPSGGIRPNSNVSTQT 432
           + +   D + K+P P+  ++ SG  +     +++T
Sbjct: 219 EEKPKPDPVLKSPSPVLRLVLSGEKKEQEGQTSET 253


>AL358392-1|CAI12154.1|  630|Homo sapiens eukaryotic translation
           initiation factor 4 gamma,e protein.
          Length = 630

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 348 LPAGGLLTPNPIFIRGTQPDAPP----SMFIQHSPQNTVHHNSVSVACATPTTA------ 397
           +  GG   P P   R T    PP    S   +HSP       S  +A +TP TA      
Sbjct: 285 MSGGGSRNPTPPIGRPTSTPTPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQ 344

Query: 398 KPRASADGISKAPRPLSNILPSGGIRPNSNVSTQT 432
           + +   D + K+P P+  ++ SG  +     +++T
Sbjct: 345 EEKPKPDPVLKSPSPVLRLVLSGEKKEQEGQTSET 379


>AF012072-1|AAC02903.2| 1585|Homo sapiens eIF4GII protein.
          Length = 1585

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 348 LPAGGLLTPNPIFIRGTQPDAPP----SMFIQHSPQNTVHHNSVSVACATPTTA------ 397
           +  GG   P P   R T    PP    S   +HSP       S  +A +TP TA      
Sbjct: 159 MSGGGSRNPTPPIGRPTSTPTPPQQLPSQVPEHSPVVYGTVESAHLAASTPVTAASDQKQ 218

Query: 398 KPRASADGISKAPRPLSNILPSGGIRPNSNVSTQT 432
           + +   D + K+P P+  ++ SG  +     +++T
Sbjct: 219 EEKPKPDPVLKSPSPVLRLVLSGEKKEQEGQTSET 253


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.314    0.128    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,860,339
Number of Sequences: 224733
Number of extensions: 4204858
Number of successful extensions: 7828
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 7770
Number of HSP's gapped (non-prelim): 60
length of query: 888
length of database: 73,234,838
effective HSP length: 97
effective length of query: 791
effective length of database: 51,435,737
effective search space: 40685667967
effective search space used: 40685667967
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 70 (32.3 bits)