Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000508-TA|BGIBMGA000508-PA|undefined
         (726 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY555274-1|AAS66753.1| 2223|Homo sapiens PF6 protein.                  54   1e-06
AL513191-1|CAH71478.1| 2223|Homo sapiens sperm associated antige...    54   1e-06
AL139345-2|CAI22957.1| 2223|Homo sapiens sperm associated antige...    54   1e-06
AL121993-5|CAI22740.1| 2223|Homo sapiens sperm associated antige...    54   1e-06
AK091816-1|BAC03753.1|  922|Homo sapiens protein ( Homo sapiens ...    54   2e-06

>AY555274-1|AAS66753.1| 2223|Homo sapiens PF6 protein.
          Length = 2223

 Score = 54.4 bits (125), Expect = 1e-06
 Identities = 25/99 (25%), Positives = 47/99 (47%)

Query: 33  EKPSSHLIDDFDYFEDFTGISAFQIILEAFNTFNCVDYKYCEVTDTFVLMFFNSHNKDGI 92
           +K     + D+ + E F      Q++ EA   + CVD  Y    ++ +L+F N  N+  +
Sbjct: 772 KKTQQRSLMDWSFTEHFKPKVLLQVLQEAHKQYRCVDSYYHTQDNSLLLVFHNPMNRQRL 831

Query: 93  ACEEWRSHIPTPLCLQDFFDYTLEEHYEWIQKEEKAYDE 131
            CE W   + + +  +++ +   +   +WI KEE  Y E
Sbjct: 832 HCEYWNIALHSNVGFRNYLELVAKSIQDWITKEEAIYQE 870



 Score = 35.9 bits (79), Expect = 0.51
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 362  ATDFCLGEIFSRRTDGTNILLNKDGVQVVSFPDGTRIITKY 402
            ATD   G + + R D   I+  KDG ++V   DGTRI T Y
Sbjct: 1422 ATDPVNGTVMTTREDKVVIVERKDGTRIVDHADGTRITTFY 1462


>AL513191-1|CAH71478.1| 2223|Homo sapiens sperm associated antigen
           17 protein.
          Length = 2223

 Score = 54.4 bits (125), Expect = 1e-06
 Identities = 25/99 (25%), Positives = 47/99 (47%)

Query: 33  EKPSSHLIDDFDYFEDFTGISAFQIILEAFNTFNCVDYKYCEVTDTFVLMFFNSHNKDGI 92
           +K     + D+ + E F      Q++ EA   + CVD  Y    ++ +L+F N  N+  +
Sbjct: 772 KKTQQRSLMDWSFTEHFKPKVLLQVLQEAHKQYRCVDSYYHTQDNSLLLVFHNPMNRQRL 831

Query: 93  ACEEWRSHIPTPLCLQDFFDYTLEEHYEWIQKEEKAYDE 131
            CE W   + + +  +++ +   +   +WI KEE  Y E
Sbjct: 832 HCEYWNIALHSNVGFRNYLELVAKSIQDWITKEEAIYQE 870



 Score = 35.9 bits (79), Expect = 0.51
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 362  ATDFCLGEIFSRRTDGTNILLNKDGVQVVSFPDGTRIITKY 402
            ATD   G + + R D   I+  KDG ++V   DGTRI T Y
Sbjct: 1422 ATDPVNGTVMTTREDKVVIVERKDGTRIVDHADGTRITTFY 1462


>AL139345-2|CAI22957.1| 2223|Homo sapiens sperm associated antigen
           17 protein.
          Length = 2223

 Score = 54.4 bits (125), Expect = 1e-06
 Identities = 25/99 (25%), Positives = 47/99 (47%)

Query: 33  EKPSSHLIDDFDYFEDFTGISAFQIILEAFNTFNCVDYKYCEVTDTFVLMFFNSHNKDGI 92
           +K     + D+ + E F      Q++ EA   + CVD  Y    ++ +L+F N  N+  +
Sbjct: 772 KKTQQRSLMDWSFTEHFKPKVLLQVLQEAHKQYRCVDSYYHTQDNSLLLVFHNPMNRQRL 831

Query: 93  ACEEWRSHIPTPLCLQDFFDYTLEEHYEWIQKEEKAYDE 131
            CE W   + + +  +++ +   +   +WI KEE  Y E
Sbjct: 832 HCEYWNIALHSNVGFRNYLELVAKSIQDWITKEEAIYQE 870



 Score = 35.9 bits (79), Expect = 0.51
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 362  ATDFCLGEIFSRRTDGTNILLNKDGVQVVSFPDGTRIITKY 402
            ATD   G + + R D   I+  KDG ++V   DGTRI T Y
Sbjct: 1422 ATDPVNGTVMTTREDKVVIVERKDGTRIVDHADGTRITTFY 1462


>AL121993-5|CAI22740.1| 2223|Homo sapiens sperm associated antigen
           17 protein.
          Length = 2223

 Score = 54.4 bits (125), Expect = 1e-06
 Identities = 25/99 (25%), Positives = 47/99 (47%)

Query: 33  EKPSSHLIDDFDYFEDFTGISAFQIILEAFNTFNCVDYKYCEVTDTFVLMFFNSHNKDGI 92
           +K     + D+ + E F      Q++ EA   + CVD  Y    ++ +L+F N  N+  +
Sbjct: 772 KKTQQRSLMDWSFTEHFKPKVLLQVLQEAHKQYRCVDSYYHTQDNSLLLVFHNPMNRQRL 831

Query: 93  ACEEWRSHIPTPLCLQDFFDYTLEEHYEWIQKEEKAYDE 131
            CE W   + + +  +++ +   +   +WI KEE  Y E
Sbjct: 832 HCEYWNIALHSNVGFRNYLELVAKSIQDWITKEEAIYQE 870



 Score = 35.9 bits (79), Expect = 0.51
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 362  ATDFCLGEIFSRRTDGTNILLNKDGVQVVSFPDGTRIITKY 402
            ATD   G + + R D   I+  KDG ++V   DGTRI T Y
Sbjct: 1422 ATDPVNGTVMTTREDKVVIVERKDGTRIVDHADGTRITTFY 1462


>AK091816-1|BAC03753.1|  922|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34497 fis, clone HLUNG2005133. ).
          Length = 922

 Score = 53.6 bits (123), Expect = 2e-06
 Identities = 25/99 (25%), Positives = 46/99 (46%)

Query: 33  EKPSSHLIDDFDYFEDFTGISAFQIILEAFNTFNCVDYKYCEVTDTFVLMFFNSHNKDGI 92
           +K     + D+ + E F      Q++ EA   + CVD  Y     + +L+F N  N+  +
Sbjct: 772 KKTQQRSLMDWSFTEHFKPKVLLQVLQEAHKQYRCVDSYYHTQDHSLLLVFHNPMNRQRL 831

Query: 93  ACEEWRSHIPTPLCLQDFFDYTLEEHYEWIQKEEKAYDE 131
            CE W   + + +  +++ +   +   +WI KEE  Y E
Sbjct: 832 HCEYWNIALHSNVGFRNYLELVAKSIQDWITKEEAIYQE 870


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,400,479
Number of Sequences: 224733
Number of extensions: 3536356
Number of successful extensions: 7875
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7858
Number of HSP's gapped (non-prelim): 9
length of query: 726
length of database: 73,234,838
effective HSP length: 95
effective length of query: 631
effective length of database: 51,885,203
effective search space: 32739563093
effective search space used: 32739563093
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 69 (31.9 bits)