Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000508-TA|BGIBMGA000508-PA|undefined
(726 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 36 0.10
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 36 0.10
AC090999-21|AAK26150.1| 530|Caenorhabditis elegans Hypothetical... 32 1.2
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 32 1.6
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 32 1.6
AC006656-3|AAF39882.1| 549|Caenorhabditis elegans Hypothetical ... 32 1.6
AL033536-5|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 31 2.2
Z48783-1|CAA88701.1| 780|Caenorhabditis elegans Hypothetical pr... 31 2.9
AF233652-1|AAF63475.1| 780|Caenorhabditis elegans RFX-type tran... 31 2.9
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 30 5.0
Z35663-12|CAA84736.2| 718|Caenorhabditis elegans Hypothetical p... 30 6.6
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 30 6.6
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 30 6.6
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 30 6.6
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 30 6.6
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 30 6.6
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 30 6.6
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 30 6.6
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 30 6.6
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 30 6.6
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 30 6.6
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 30 6.6
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 30 6.6
AC006790-6|AAF60734.1| 299|Caenorhabditis elegans Hypothetical ... 30 6.6
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 8.8
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 8.8
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 8.8
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 8.8
AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical ... 29 8.8
AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical ... 29 8.8
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical protein
F31D5.5 protein.
Length = 1788
Score = 35.9 bits (79), Expect = 0.10
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 482 SVKNIYTIEHKNFTTITVNTLN---ETVSVESPNKTKITLDKYNHFEFDLDSVTKASFNG 538
S N TI T+ TV T + TV+ +P T D NHF FD+ V N
Sbjct: 921 STVNSTTITSTTITSTTVTTSSPSTSTVTTTTPPSTTTQDDVRNHFLFDISLV--EGKNN 978
Query: 539 DTVNIDYTACVDCESKTKCEIEIRAE 564
+ +T+ + C S +CE I+ +
Sbjct: 979 SMKEVKFTSIMTC-SPEECEYSIKVD 1003
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 35.9 bits (79), Expect = 0.10
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 482 SVKNIYTIEHKNFTTITVNTLN---ETVSVESPNKTKITLDKYNHFEFDLDSVTKASFNG 538
S N TI T+ TV T + TV+ +P T D NHF FD+ V N
Sbjct: 890 STVNSTTITSTTITSTTVTTSSPSTSTVTTTTPPSTTTQDDVRNHFLFDISLV--EGKNN 947
Query: 539 DTVNIDYTACVDCESKTKCEIEIRAE 564
+ +T+ + C S +CE I+ +
Sbjct: 948 SMKEVKFTSIMTC-SPEECEYSIKVD 972
>AC090999-21|AAK26150.1| 530|Caenorhabditis elegans Hypothetical
protein Y82E9BR.2 protein.
Length = 530
Score = 32.3 bits (70), Expect = 1.2
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 11 SIKFVFDCPDISELVSETEIVNEKPSS---HLIDDFDYFEDFTGISAFQIILEAFNTFNC 67
S+KF + P+++EL + NEK S I DF+Y E I+ Q L + ++
Sbjct: 279 SLKFAYKTPNLTELTKKMCCCNEKTKSIYFERILDFNYSESIDIINYIQDFLCSIDSPAN 338
Query: 68 VDYKYCEVTDTFVLMF-FNSHNKDGI 92
V Y EV D V++F N D +
Sbjct: 339 V-YFNSEVFDPNVVLFGVNGRQNDNV 363
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
protein W06A7.3c protein.
Length = 2484
Score = 31.9 bits (69), Expect = 1.6
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 539 DTVNIDYTACVDCESKTKCE---IEIRAEKEKIDPKSLQKWLKMRDSFNKKIVVNEEGAI 595
+T + + ES CE I+I A + ++P K I+ +E
Sbjct: 43 ETEPVSSAKVIALESSGDCEEGNIKISANENSVEPDGADKPAHTEQEIPTIILPSETTVT 102
Query: 596 NIEDHHCSSENINSGISKNDIGADVVSDYNLEGVED 631
+EDH +E +N++ + + S+ N+ G+ED
Sbjct: 103 QLEDHLSETEE-----KQNEVESSIKSEKNVIGLED 133
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
protein W06A7.3a protein.
Length = 2607
Score = 31.9 bits (69), Expect = 1.6
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 539 DTVNIDYTACVDCESKTKCE---IEIRAEKEKIDPKSLQKWLKMRDSFNKKIVVNEEGAI 595
+T + + ES CE I+I A + ++P K I+ +E
Sbjct: 43 ETEPVSSAKVIALESSGDCEEGNIKISANENSVEPDGADKPAHTEQEIPTIILPSETTVT 102
Query: 596 NIEDHHCSSENINSGISKNDIGADVVSDYNLEGVED 631
+EDH +E +N++ + + S+ N+ G+ED
Sbjct: 103 QLEDHLSETEE-----KQNEVESSIKSEKNVIGLED 133
>AC006656-3|AAF39882.1| 549|Caenorhabditis elegans Hypothetical
protein H12I13.3 protein.
Length = 549
Score = 31.9 bits (69), Expect = 1.6
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 26/187 (13%)
Query: 453 NNTVDTLNISYIKNNEEIETDIERNDGYVSVKNIYTIEHKNFTTITVNTLNETVSVESPN 512
NN+V + I+N I + +D ++K I KN T IT + L SVE
Sbjct: 344 NNSVFGKTMENIRNRVNIRL-VTDDDS--ALKLIRKPNFKNSTIITEDLL----SVEL-T 395
Query: 513 KTKITLDKYNHFEFDLDSVTKASFNGDTVNIDY--TACVDCESKTKCEIEIRAE-KEKID 569
KTK+ DK +F +D+ GD + + Y T + E +T+ E KE D
Sbjct: 396 KTKLVFDKPIYFHYDV----MQKHYGDKIKLCYQDTDSLIYEVETEDIYEDMGNMKEWFD 451
Query: 570 PKSLQKWLKMRDSFNKKIVVNEEGAINIEDHHCSSENINSGISKNDIGADVVSDYNLEGV 629
K + D NKK++ + +N +N++ G+ D+N+EG
Sbjct: 452 FSDYPKNHPLYDESNKKVIGKFKDELN-------GKNMDEGVFLKP----KQYDFNVEGA 500
Query: 630 EDEKFEG 636
E +K +G
Sbjct: 501 EKKKSKG 507
>AL033536-5|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 31.5 bits (68), Expect = 2.2
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 430 DSESTKSKVSASQKSGRSSYLETNNTVDTLNISYIKNNEEIETDIERNDGYVSVKNIYTI 489
DS S S S + G SS + T+D + + +E IE + S + T
Sbjct: 696 DSTIITSTSSTSTRPGTSSTATDSPTMDDTSKTSTVTSEGTTLSIESTESSASPSDFTTP 755
Query: 490 EHKNFTTITVNTLNETVSVESPNKTKITLD 519
+ FT+ +V+ +E S SP+ T+D
Sbjct: 756 DFIGFTS-SVSRTSEQYSSSSPSSDTTTMD 784
>Z48783-1|CAA88701.1| 780|Caenorhabditis elegans Hypothetical
protein F33H1.1a protein.
Length = 780
Score = 31.1 bits (67), Expect = 2.9
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 433 STKSKVSASQKSGRSSYLETNNTVDTLNISYIKNNEEIE-TDIERNDGYVSVKNIYTIEH 491
S + K+ ++ K +S ET+NT+ T + S +++E D++ N + + +
Sbjct: 72 SGERKLRSASKDSKSLSKETHNTISTRSSSSGTPRKKMEPEDVKPNIKMLKKSLPVSFQC 131
Query: 492 KNFTTITVNTLNETV--SVESPNKTKITLDKYNHFEF 526
N TV E + S + PN T+ D YN E+
Sbjct: 132 SNLNDGTVGDEMEVIQHSTDDPNGTREEFD-YNQIEY 167
>AF233652-1|AAF63475.1| 780|Caenorhabditis elegans RFX-type
transcription factor DAF-19 short variant protein.
Length = 780
Score = 31.1 bits (67), Expect = 2.9
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 433 STKSKVSASQKSGRSSYLETNNTVDTLNISYIKNNEEIE-TDIERNDGYVSVKNIYTIEH 491
S + K+ ++ K +S ET+NT+ T + S +++E D++ N + + +
Sbjct: 72 SGERKLRSASKDSKSLSKETHNTISTRSSSSGTPRKKMEPEDVKPNIKMLKKSLPVSFQC 131
Query: 492 KNFTTITVNTLNETV--SVESPNKTKITLDKYNHFEF 526
N TV E + S + PN T+ D YN E+
Sbjct: 132 SNLNDGTVGDEMEVIQHSTDDPNGTREEFD-YNQIEY 167
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 30.3 bits (65), Expect = 5.0
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 652 TLRFFVLKRTLEQQWSDKERETLKGAKELLFAVLRYRQVLEDDR--QRLLDMSVLDQR 707
T +FF L ++ + +DK RE K ++L V ++ ++D ++ L +VLD R
Sbjct: 198 TEKFFQLMKSTNKDLTDKRREAAKEIEQLKMEVQSLKRAAQEDAAIKKTLKKTVLDLR 255
>Z35663-12|CAA84736.2| 718|Caenorhabditis elegans Hypothetical
protein T04A8.15 protein.
Length = 718
Score = 29.9 bits (64), Expect = 6.6
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 611 ISKNDIGADVVSDYNLEGVEDEKFEGPSLSHGKC----RDVYLAKTLRFFVLKRTLEQQW 666
I +N+ +V S + + D+ E P+ KC RD+ L R + + + +
Sbjct: 31 IVRNESDKNVPSPFEEITLSDDDEEAPAKKPVKCATCARDMTLWMNSRRDIHVKVCKAKQ 90
Query: 667 SDKERETLKGAKELLFAVLRYRQVLE 692
S+KE+ET + +K L + + QV E
Sbjct: 91 SEKEKETTRKSKTLTETIEKDDQVYE 116
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 220 YYVCSLNTDERLRCVNVNGEVIIFKKSGQVETLRPDGSIIKII 262
Y+ + + CV G VII +V+ + PDGS+ K I
Sbjct: 139 YFAVVTRVRQEVHCVGPEGGVIISSVVPRVQAIFPDGSLTKTI 181
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 220 YYVCSLNTDERLRCVNVNGEVIIFKKSGQVETLRPDGSIIKII 262
Y+ + + CV G VII +V+ + PDGS+ K I
Sbjct: 249 YFAVVTRVRQEVHCVGPEGGVIISSVVPRVQAIFPDGSLTKTI 291
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 220 YYVCSLNTDERLRCVNVNGEVIIFKKSGQVETLRPDGSIIKII 262
Y+ + + CV G VII +V+ + PDGS+ K I
Sbjct: 1153 YFAVVTRVRQEVHCVGPEGGVIISSVVPRVQAIFPDGSLTKTI 1195
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 220 YYVCSLNTDERLRCVNVNGEVIIFKKSGQVETLRPDGSIIKII 262
Y+ + + CV G VII +V+ + PDGS+ K I
Sbjct: 1153 YFAVVTRVRQEVHCVGPEGGVIISSVVPRVQAIFPDGSLTKTI 1195
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 220 YYVCSLNTDERLRCVNVNGEVIIFKKSGQVETLRPDGSIIKII 262
Y+ + + CV G VII +V+ + PDGS+ K I
Sbjct: 1153 YFAVVTRVRQEVHCVGPEGGVIISSVVPRVQAIFPDGSLTKTI 1195
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 220 YYVCSLNTDERLRCVNVNGEVIIFKKSGQVETLRPDGSIIKII 262
Y+ + + CV G VII +V+ + PDGS+ K I
Sbjct: 1159 YFAVVTRVRQEVHCVGPEGGVIISSVVPRVQAIFPDGSLTKTI 1201
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 220 YYVCSLNTDERLRCVNVNGEVIIFKKSGQVETLRPDGSIIKII 262
Y+ + + CV G VII +V+ + PDGS+ K I
Sbjct: 1159 YFAVVTRVRQEVHCVGPEGGVIISSVVPRVQAIFPDGSLTKTI 1201
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 220 YYVCSLNTDERLRCVNVNGEVIIFKKSGQVETLRPDGSIIKII 262
Y+ + + CV G VII +V+ + PDGS+ K I
Sbjct: 1153 YFAVVTRVRQEVHCVGPEGGVIISSVVPRVQAIFPDGSLTKTI 1195
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 220 YYVCSLNTDERLRCVNVNGEVIIFKKSGQVETLRPDGSIIKII 262
Y+ + + CV G VII +V+ + PDGS+ K I
Sbjct: 1159 YFAVVTRVRQEVHCVGPEGGVIISSVVPRVQAIFPDGSLTKTI 1201
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 220 YYVCSLNTDERLRCVNVNGEVIIFKKSGQVETLRPDGSIIKII 262
Y+ + + CV G VII +V+ + PDGS+ K I
Sbjct: 1159 YFAVVTRVRQEVHCVGPEGGVIISSVVPRVQAIFPDGSLTKTI 1201
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 220 YYVCSLNTDERLRCVNVNGEVIIFKKSGQVETLRPDGSIIKII 262
Y+ + + CV G VII +V+ + PDGS+ K I
Sbjct: 256 YFAVVTRVRQEVHCVGPEGGVIISSVVPRVQAIFPDGSLTKTI 298
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 29.9 bits (64), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 220 YYVCSLNTDERLRCVNVNGEVIIFKKSGQVETLRPDGSIIKII 262
Y+ + + CV G VII +V+ + PDGS+ K I
Sbjct: 329 YFAVVTRVRQEVHCVGPEGGVIISSVVPRVQAIFPDGSLTKTI 371
>AC006790-6|AAF60734.1| 299|Caenorhabditis elegans Hypothetical
protein Y49F6B.8 protein.
Length = 299
Score = 29.9 bits (64), Expect = 6.6
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Query: 511 PNKTKITL---DKYNHFEFDLDSVTKASFNGDTVNIDY-TACVDCESKTKCEIEIRAEKE 566
P K + TL +K E L V N V ++ T D K E+ + AEK
Sbjct: 33 PQKIQFTLNVMEKDGSVENSLKYVLDGQINEGRVAMESKTFRTDPHGKDLSELMVSAEKN 92
Query: 567 KIDPKSLQKWLKMRDSFNKKIVVNEEGA-INIEDHHCSSENINSGISKN 614
+ + + +W+ RD F + EEGA I E + + I + KN
Sbjct: 93 EQELELETQWVYDRDDFADLKYLLEEGAPIETETSESNFDAITAKFPKN 141
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 29.5 bits (63), Expect = 8.8
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 657 VLKRTLEQQWSDKERETLKGAKELLFAVLRYRQVLEDDRQRLLDMSVLDQRAEDERHIDD 716
+L+ LE + ++ER L+ A+E L+ R+ + +RQRL D + +R E+ER +
Sbjct: 455 LLRERLELERIERERRELE-ARERQELELQRREAEDRERQRLEDEAREMRRREEERREAE 513
Query: 717 II 718
++
Sbjct: 514 LV 515
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.5 bits (63), Expect = 8.8
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 657 VLKRTLEQQWSDKERETLKGAKELLFAVLRYRQVLEDDRQRLLDMSVLDQRAEDERHIDD 716
+L+ LE + ++ER L+ A+E L+ R+ + +RQRL D + +R E+ER +
Sbjct: 455 LLRERLELERIERERRELE-ARERQELELQRREAEDRERQRLEDEAREMRRREEERREAE 513
Query: 717 II 718
++
Sbjct: 514 LV 515
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.5 bits (63), Expect = 8.8
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 657 VLKRTLEQQWSDKERETLKGAKELLFAVLRYRQVLEDDRQRLLDMSVLDQRAEDERHIDD 716
+L+ LE + ++ER L+ A+E L+ R+ + +RQRL D + +R E+ER +
Sbjct: 455 LLRERLELERIERERRELE-ARERQELELQRREAEDRERQRLEDEAREMRRREEERREAE 513
Query: 717 II 718
++
Sbjct: 514 LV 515
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.5 bits (63), Expect = 8.8
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 657 VLKRTLEQQWSDKERETLKGAKELLFAVLRYRQVLEDDRQRLLDMSVLDQRAEDERHIDD 716
+L+ LE + ++ER L+ A+E L+ R+ + +RQRL D + +R E+ER +
Sbjct: 455 LLRERLELERIERERRELE-ARERQELELQRREAEDRERQRLEDEAREMRRREEERREAE 513
Query: 717 II 718
++
Sbjct: 514 LV 515
>AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical
protein C02E11.1b protein.
Length = 1123
Score = 29.5 bits (63), Expect = 8.8
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 477 NDGYVSVKNIYTIEHKNFTTITVNTLNETVSVESPNKTKITLDKYNHFEFDLDSVTKASF 536
+ GY+ ++N+ EH T NT TV + K+ + +FD+ + S
Sbjct: 336 SQGYLKIENLKEDEHTTITAKAPNTQFSTVHA-NVKFPKVEIQDVTVQKFDICGQVEKSE 394
Query: 537 NGDTVNIDYTACVDCESKTKCEIEIRAEKEKIDPKS 572
NG + +T D K EI+ +A+ P S
Sbjct: 395 NGVLGKLTFTRKDD---KRSLEIQPKADGSFCQPVS 427
>AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical
protein C02E11.1a protein.
Length = 1121
Score = 29.5 bits (63), Expect = 8.8
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 477 NDGYVSVKNIYTIEHKNFTTITVNTLNETVSVESPNKTKITLDKYNHFEFDLDSVTKASF 536
+ GY+ ++N+ EH T NT TV + K+ + +FD+ + S
Sbjct: 334 SQGYLKIENLKEDEHTTITAKAPNTQFSTVHA-NVKFPKVEIQDVTVQKFDICGQVEKSE 392
Query: 537 NGDTVNIDYTACVDCESKTKCEIEIRAEKEKIDPKS 572
NG + +T D K EI+ +A+ P S
Sbjct: 393 NGVLGKLTFTRKDD---KRSLEIQPKADGSFCQPVS 425
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.134 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,114,644
Number of Sequences: 27539
Number of extensions: 735684
Number of successful extensions: 2171
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2153
Number of HSP's gapped (non-prelim): 36
length of query: 726
length of database: 12,573,161
effective HSP length: 87
effective length of query: 639
effective length of database: 10,177,268
effective search space: 6503274252
effective search space used: 6503274252
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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