Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000507-TA|BGIBMGA000507-PA|undefined
         (365 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-P...    31   1.9  
AE014298-966|AAF46211.1|  933|Drosophila melanogaster CG4557-PA ...    30   4.4  
AE014297-409|AAF51912.1|  308|Drosophila melanogaster CG15585-PA...    30   5.8  
AE013599-851|AAF58949.1|  680|Drosophila melanogaster CG13954-PA...    30   5.8  
AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p pro...    29   7.6  
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P...    29   7.6  

>AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-PA
           protein.
          Length = 1317

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 9/105 (8%)

Query: 27  ENWKVKVTILEAAD----SDNARNYLNKFEIFATEEKRFVIKSIS-KTETTFMVNQLGGE 81
           EN K K T L  A+    SDN  +Y  K E+    ++   IK  S KT+ T + N     
Sbjct: 889 ENRKSKSTELTDANFSSLSDNNMSY--KIELDGLRKEENPIKEFSLKTDITAVSNTFTRS 946

Query: 82  KKNKEDDSCRVFEEGQLYLKE--KKEMPAHVQALIIKHLILKMKE 124
           K+N E+ +   F+E ++ L++    ++   ++  I K L  K+K+
Sbjct: 947 KENTENSNDTFFQESRITLQKYNHSKLSNAIKKQIDKSLQQKIKK 991


>AE014298-966|AAF46211.1|  933|Drosophila melanogaster CG4557-PA
           protein.
          Length = 933

 Score = 30.3 bits (65), Expect = 4.4
 Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 4/116 (3%)

Query: 20  EDAKLDEENWKVKVTILEAADSDNARNYLNKFEIFATEEKRFVIKSISKTETTFMVNQLG 79
           ++A+L E N +++  +  AA+S N+ +  +  +  +  EK+F      +      +  L 
Sbjct: 334 QNAELLERNQELRARVEAAANSANSPDAADAVQRLSALEKKFQASIRERDALRIQMKSLR 393

Query: 80  GEKKNK--EDDSCRVFEEGQLYLKEKKEMPAHV--QALIIKHLILKMKEEYLLIKR 131
            E +NK   D+     E       E +++   +  Q+ IIK L  K K    L+K+
Sbjct: 394 DELQNKIPRDELAECNEMIAALQSEGEKLSKEILQQSTIIKKLRAKEKTSDTLLKK 449


>AE014297-409|AAF51912.1|  308|Drosophila melanogaster CG15585-PA
           protein.
          Length = 308

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 25  DEENWKVKVTILEAADSDNARNYLNKFEIFATEEKRFVIKSISKTETTFMVNQLGGEKKN 84
           D   W   V + E AD     N     E     E   ++K + +   TF  N  G + + 
Sbjct: 103 DRGRWLRLVQLGEPADEVVVFNDAKSLE--GDSELTMILKFLKRAMETFGRNH-GLQLRL 159

Query: 85  KEDDSCRVFEEGQLYLKEKKEMPAHVQALIIKHLILKMKEEYL 127
             +   RV EE +  LK KK+     + LII  L++ MK  +L
Sbjct: 160 NSEGGARVMEESEARLKRKKK-----KWLIILPLVILMKIAHL 197


>AE013599-851|AAF58949.1|  680|Drosophila melanogaster CG13954-PA
           protein.
          Length = 680

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 11/31 (35%), Positives = 23/31 (74%)

Query: 251 RINPSPTAETSGQFKAAKRGQSQTELLKEKS 281
           ++ PSP A +SG+ +A  +G+++T+ ++E S
Sbjct: 116 QVQPSPAATSSGKARAQTKGKTRTDDIEEAS 146


>AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p
           protein.
          Length = 565

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 81  EKKNKEDDSCRVFEEGQLYLKEKKEMPAHVQALIIKHLILKMKEEYLLIKRRRLEVKEGM 140
           EK  +E +  +  +E +  LKEK+   A     + K + LK KEE L  K + L++KE  
Sbjct: 73  EKLKRETEERQREKEREEKLKEKER--AEKLKDLEKEVKLKEKEEQLKEKEKELKLKEKK 130

Query: 141 RRESITMVDRS 151
            ++ +   ++S
Sbjct: 131 EKDKVKEKEKS 141


>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
           protein.
          Length = 1168

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 81  EKKNKEDDSCRVFEEGQLYLKEKKEMPAHVQALIIKHLILKMKEEYLLIKRRRLEVKEGM 140
           EK  +E +  +  +E +  LKEK+   A     + K + LK KEE L  K + L++KE  
Sbjct: 676 EKLKRETEERQREKEREEKLKEKER--AEKLKDLEKEVKLKEKEEQLKEKEKELKLKEKK 733

Query: 141 RRESITMVDRS 151
            ++ +   ++S
Sbjct: 734 EKDKVKEKEKS 744


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.134    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,398,112
Number of Sequences: 52641
Number of extensions: 743901
Number of successful extensions: 2304
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2291
Number of HSP's gapped (non-prelim): 18
length of query: 365
length of database: 24,830,863
effective HSP length: 86
effective length of query: 279
effective length of database: 20,303,737
effective search space: 5664742623
effective search space used: 5664742623
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)