Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000507-TA|BGIBMGA000507-PA|undefined
         (365 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.77 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.77 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   7.2  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   9.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 240 IGVPITAIVQIRINPSPTAETSGQFKAAKRGQSQT 274
           IG  I  +VQ+++N SP      +    K+G + T
Sbjct: 792 IGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTAT 826


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 240 IGVPITAIVQIRINPSPTAETSGQFKAAKRGQSQT 274
           IG  I  +VQ+++N SP      +    K+G + T
Sbjct: 788 IGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTAT 822


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 9/21 (42%), Positives = 15/21 (71%)

Query: 11   DENYWRRNIEDAKLDEENWKV 31
            +E  +R N+E AK +EE W++
Sbjct: 1075 NEGPFRLNVETAKTNEEMWEL 1095


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)

Query: 203 EEWRDKVYVDDFPTDG-PNLYVAITG 227
           ++WRDK +V     DG P+    I+G
Sbjct: 71  DQWRDKTFVTILRYDGVPSTLNVISG 96


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 11 DENYWRRNIEDAKLDE 26
          DENYW+ N +   ++E
Sbjct: 62 DENYWQCNDKKTDIEE 77


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.134    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,924
Number of Sequences: 429
Number of extensions: 4555
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 5
length of query: 365
length of database: 140,377
effective HSP length: 59
effective length of query: 306
effective length of database: 115,066
effective search space: 35210196
effective search space used: 35210196
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)