GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000507-TA|BGIBMGA000507-PA|undefined
         (365 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            29   0.20 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.62 
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    25   4.4  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 29.1 bits (62), Expect = 0.20
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 192 KKYNTQLRVRGEEWRDKVYVDDFPTD 217
           +K  T L+  G +W +K Y+ DFP D
Sbjct: 771 QKEVTVLQFTGNDWVEKEYISDFPLD 796


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 27.5 bits (58), Expect = 0.62
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 198 LRVRGEEWRDKVYVDDFPTDG 218
           L+   + WR + Y D+FP DG
Sbjct: 783 LQYTSDRWRQQKYYDEFPLDG 803


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 105 EMPAHVQALIIKHLILKMKEEYLLIKRRRLEVKEGMRRES 144
           EMPA V     +    ++ E+    K RRLE++E  R+E+
Sbjct: 398 EMPATVVENFRERYFTQLAEDNGTRKERRLELREVGRKEA 437


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.134    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,848
Number of Sequences: 2123
Number of extensions: 13602
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 3
length of query: 365
length of database: 516,269
effective HSP length: 65
effective length of query: 300
effective length of database: 378,274
effective search space: 113482200
effective search space used: 113482200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)