Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000507-TA|BGIBMGA000507-PA|undefined
(365 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g40020.1 68417.m05666 hypothetical protein 38 0.014
At3g57250.1 68416.m06373 emsy N terminus domain-containing prote... 35 0.074
At5g42520.1 68418.m05176 expressed protein 34 0.17
At5g39630.1 68418.m04799 vesicle transport v-SNARE family protei... 32 0.69
At2g19930.1 68415.m02329 RNA-dependent RNA polymerase family pro... 32 0.69
At1g49650.1 68414.m05568 cell death associated protein-related s... 30 2.8
At1g67230.1 68414.m07652 expressed protein 29 3.7
At1g50770.1 68414.m05710 hypothetical protein 29 4.9
At5g41140.1 68418.m05001 expressed protein 29 6.5
At3g51000.1 68416.m05584 epoxide hydrolase, putative similar to ... 29 6.5
At3g03290.1 68416.m00326 universal stress protein (USP) family p... 29 6.5
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 28 8.5
At3g54760.1 68416.m06059 dentin sialophosphoprotein-related cont... 28 8.5
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 28 8.5
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 37.5 bits (83), Expect = 0.014
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 2 APKKSKDVADENYWRRNIEDAKLDEENWKVKVTILEAADSDNARNYLNKFEIFATEEKRF 61
A SK +EN+ R+I ++E N + + A++ N ++ L E EE +F
Sbjct: 284 AENLSKKAKEENHKVRDILKQAINEANVAKEAAGIARAENSNLKDALLDKE----EELQF 339
Query: 62 VIKSISKTETTFMV--NQLGGEKKNKEDDSCRVFEEGQLYLKEKKEMPAHVQALIIKHLI 119
+K I + + V + + KK + + EE Q L ++ MP V ++ K +
Sbjct: 340 ALKEIERVKVNEAVANDNIKKLKKMLSEIEVAMEEEKQRSLNRQESMPKEVVEVVEKKIE 399
Query: 120 LK-MKEEYLLIKRRRLEVKEGMRRESITMVDRSE 152
K KEE K+ + E K+ + S D+ +
Sbjct: 400 EKEKKEEKKENKKEKKESKKEKKEHSEKKEDKEK 433
>At3g57250.1 68416.m06373 emsy N terminus domain-containing protein
/ ENT domain-containing protein contains Pfam profile
PF03735: ENT domain
Length = 142
Score = 35.1 bits (77), Expect = 0.074
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 51 FEIFATEEKRFVIKSISKTETTFMVNQLGGEKKNKEDDSCRVFEEGQLYLKEKKEM--PA 108
+E + +EK+ +IK I + ++ G EKK DD + Q +EK++M A
Sbjct: 6 YEKLSEQEKKQMIKEIQEQAYEALLYAFGVEKKMISDDVKNLLNIEQESAEEKRKMAYEA 65
Query: 109 HVQALIIKHLILKMKEEYLLIKRRRLEVKEGMRRE 143
+ A H + K ++ L + +L + + RE
Sbjct: 66 TLLAATFSHSLAKDRDGVLATLKNQLHITDDFHRE 100
>At5g42520.1 68418.m05176 expressed protein
Length = 342
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 251 RINPSPTAETSGQFKAAKRGQSQTELLKEKSFKFWDDLQNLRVQKDTADVFTDTAFVVFS 310
R+NP T +T+ A KRG +K++S + + ++ D D + ++ S
Sbjct: 171 RVNPKATTQTA----ANKRGPKNQRKVKKESEDDLNKIMFVKTTHDYTDEDSSKHILIGS 226
Query: 311 PPYWDNEKMSGSPDKIYDE 329
W +++M G +YDE
Sbjct: 227 KSDWKSQEMVGLNQVVYDE 245
>At5g39630.1 68418.m04799 vesicle transport v-SNARE family protein
similar to v-SNARE AtVTI1a (GI:10177700) Arabidopsis
thaliana; contains Pfam profile PF05008: Vesicle
transport v-SNARE protein
Length = 207
Score = 31.9 bits (69), Expect = 0.69
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 53 IFATEEKRFVIKSISKTETTFMVNQL-GGEKKNKEDDSCRVFEEGQLYLKEKKEMPAHVQ 111
+F ++++ SI+ ++ + L GGEKK K + E + + + +++
Sbjct: 4 VFHEYDQQYSELSINLSKKCSLAFSLKGGEKKEKLSEITYDLENAEKLISKMDHAASNLP 63
Query: 112 ALIIKHLILKMKEEYLLIKRRRLEVKEGMRRESITMVDRSEI 153
I L+ K+KE +KR R E+K E++ + R E+
Sbjct: 64 PNIKSILLEKLKESKSSLKRLRNEIKRN-TSENLKVTTREEV 104
>At2g19930.1 68415.m02329 RNA-dependent RNA polymerase family
protein contains Pfam domain, PF05183: RNA dependent RNA
polymerase
Length = 977
Score = 31.9 bits (69), Expect = 0.69
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 23 KLDEENWKVKVTILEAADSDNARNYLNKFEIFATEEKRFVIKSISKTETTFMVNQLGGEK 82
++D++N + + D + +NYL+ + TE+ + TE+ +++ +
Sbjct: 552 EMDDQNAAQMILVGIPLDEPHLKNYLSI--LLKTEKNDLKAGKLPVTESYYLMGTVDPTG 609
Query: 83 KNKEDDSCRVFEEGQL 98
KED+ C + E GQ+
Sbjct: 610 ALKEDEVCVILESGQI 625
>At1g49650.1 68414.m05568 cell death associated protein-related
similar to PrMC3 [Pinus radiata] GI:5487873; weak
similarity to cell death associated protein [Nicotiana
tabacum] GI:7417008, hsr203J [Nicotiana tabacum]
GI:22830761
Length = 374
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 14 YWRRNIE-DAKLDEENWKVKVTILEAADSDNARNYLN-KFEIFATEEKRFV 62
+WR+ + AKL + WK +V ++E D ++ + LN E + KRFV
Sbjct: 319 FWRQGLAYAAKLKKSGWKGEVEVIEEEDEEHCFHLLNPSSENAPSFMKRFV 369
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 57 EEKRFVIKSISKTETTFMVNQLGGEKKNKEDDSCRVFEEGQL-YLKEKKEMPAHVQALII 115
E+K ++ + E NQ + NKE D RV EE + YL+ + E+ ++
Sbjct: 443 EDKEIILNLKALVEKVSGENQAQLSEINKEKDELRVTEEERSEYLRLQTELKEQIEKCRS 502
Query: 116 KHLILKMKEEYLLIKRRRLE 135
+ +L+ + E L +R E
Sbjct: 503 QQELLQKEAEDLKAQRESFE 522
>At1g50770.1 68414.m05710 hypothetical protein
Length = 632
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 65 SISKTETTFMVNQLGGEKKNK---EDDSCRVFEEGQLYLKEKKEMPAHVQALIIKHLILK 121
++ +++ T N++ EK+NK E D C Y K+ +E+ V+AL IK ILK
Sbjct: 556 NVLESDETLKSNEVN-EKRNKDFGEGDDCN-----DSYGKKFQELK--VEALSIKERILK 607
Query: 122 MKEEYLLIKRRR 133
+E +K+RR
Sbjct: 608 AQETVTWLKKRR 619
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/69 (21%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 92 VFEEGQLYLKEKKEMPAHVQALIIKHLILKMKEEYLLIKRRRLEVKEGMRRE---SITMV 148
++ E ++Y ++K+++ V+ L + + ILK + + K + +V+E ++ + S ++V
Sbjct: 484 LYNEIEIYKRDKEDLEIQVEQLSLDYEILKQENHDISYKLEQSQVQEQLKMQYECSSSLV 543
Query: 149 DRSEIRGIV 157
+ +E+ V
Sbjct: 544 NVNELENHV 552
>At3g51000.1 68416.m05584 epoxide hydrolase, putative similar to
epoxide hydrolase [Glycine max] GI:2764806; contains
Pfam profile PF00561: hydrolase, alpha/beta fold family
Length = 323
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 81 EKKNKEDDSCRVFEEGQLYLKEKKEMPAHVQALIIKHLILKMKEEYLLIKR 131
+ K K D ++F +G LY+ + ++ P +A KH L + +++LLI R
Sbjct: 135 DPKLKPSDFFKIFGDG-LYITQFQK-PGRAEAAFAKHDCLSVMKKFLLITR 183
>At3g03290.1 68416.m00326 universal stress protein (USP) family
protein contains Pfam profile: PF00582 universal stress
protein family
Length = 274
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 65 SISKTETTFMVNQLGGEKKNKE-DDSCRVFEEGQLYLKEKKEMPAHVQAL 113
S S+ E + GGE + +E DD C++ E G Y E +E A V+A+
Sbjct: 50 STSEYEEFEEEKERGGEGEGEEQDDGCKIVESG--YKSEHEETEAAVEAV 97
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/64 (25%), Positives = 37/64 (57%)
Query: 81 EKKNKEDDSCRVFEEGQLYLKEKKEMPAHVQALIIKHLILKMKEEYLLIKRRRLEVKEGM 140
E + KE++ ++ E +L KEK+ + A +A I + L +++E + ++ + + +E +
Sbjct: 820 ETREKEENKKKLREAIELEEKEKRLIEAFERAEIERRLKEDLEQEEMRMRLQEAKERERL 879
Query: 141 RRES 144
RE+
Sbjct: 880 HREN 883
>At3g54760.1 68416.m06059 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor (Dentin phosphophoryn DPP,
Dentin sialoprotein DSP) [Homo sapiens]
Length = 792
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 23 KLDEENWKVKVTILEAADSDNARNYLNKFEIFATEEKRFVIKSISKTET 71
++D E + +V + AD++ A N +F IF T+ ++ + S + TET
Sbjct: 724 EVDREKNRARVVFRKGADAEVAYNSAGRFNIFGTKVVKYEL-SRNVTET 771
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/69 (21%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 92 VFEEGQLYLKEKKEMPAHVQALIIKHLILKMKEEYLLIKRRRLEVKEGMRRE---SITMV 148
++ E ++Y ++K E+ ++ L + + ILK + + K + +++E ++ + S ++V
Sbjct: 474 LYNEIEIYKRDKDELEIQMEQLALDYEILKQQNHDISYKLEQSQLQEQLKIQYECSSSLV 533
Query: 149 DRSEIRGIV 157
D +E+ V
Sbjct: 534 DVTELENQV 542
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.134 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,703,543
Number of Sequences: 28952
Number of extensions: 374282
Number of successful extensions: 1069
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1065
Number of HSP's gapped (non-prelim): 15
length of query: 365
length of database: 12,070,560
effective HSP length: 82
effective length of query: 283
effective length of database: 9,696,496
effective search space: 2744108368
effective search space used: 2744108368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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