GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000506-TA|BGIBMGA000506-
PA|IPR003140|Phospholipase/Carboxylesterase
         (126 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   4.7  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    20   6.2  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    20   6.2  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 15/50 (30%), Positives = 18/50 (36%)

Query: 52  DELKNNTGVTYPPLLQIHGNQDDLVPLKWGEETYQKLKSLGIQGSFFVQE 101
           DE       T   L     + +D  P   G   YQ   +L I G   VQE
Sbjct: 84  DESDEEKPTTSFKLKDSSSDSEDERPRPGGGTKYQTFSNLNISGFGGVQE 133


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 10/40 (25%), Positives = 22/40 (55%)

Query: 85  YQKLKSLGIQGSFFVQERLGHSLNRRGIKIIKDWIDEKLP 124
           YQ    LG+ G+ +++++L  +L++     + + I   LP
Sbjct: 18  YQVQGQLGLAGNNYIEKQLLCALDKAPCDALGNQIKGALP 57


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 15  GFSMGGALAFHTGYRWDRKLAGVFAFS 41
           GF    ++A    Y  D  LAGV  +S
Sbjct: 324 GFDNPKSVALKAQYAKDNNLAGVMIWS 350


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.139    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,496
Number of Sequences: 317
Number of extensions: 1193
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 126
length of database: 114,650
effective HSP length: 50
effective length of query: 76
effective length of database: 98,800
effective search space:  7508800
effective search space used:  7508800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)