Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000505-TA|BGIBMGA000505-PA|undefined
(120 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ682657-1|ABG89105.1| 546|Homo sapiens tricellulin isoform a1 ... 30 1.7
DQ682656-1|ABG89104.1| 558|Homo sapiens tricellulin isoform a p... 30 1.7
BC067746-1|AAH67746.1| 280|Homo sapiens C-type lectin domain fa... 30 1.7
BC039072-1|AAH39072.1| 280|Homo sapiens C-type lectin domain fa... 30 1.7
BC033689-1|AAH33689.1| 558|Homo sapiens MARVEL domain containin... 30 1.7
AY358587-1|AAQ88950.1| 280|Homo sapiens QAKY569 protein. 30 1.7
AK075114-1|BAC11410.1| 280|Homo sapiens protein ( Homo sapiens ... 30 1.7
AK055094-1|BAB70853.1| 457|Homo sapiens protein ( Homo sapiens ... 30 1.7
AF200949-1|AAF36830.1| 280|Homo sapiens C-type lectin-like rece... 30 1.7
AB219937-1|BAE54514.1| 457|Homo sapiens TRICbeta protein. 30 1.7
AB219936-1|BAE54513.1| 558|Homo sapiens TRIC protein. 30 1.7
U82812-1|AAB91989.1| 347|Homo sapiens Sp alpha protein. 28 8.8
BC033586-1|AAH33586.1| 347|Homo sapiens CD5 molecule-like protein. 28 8.8
AY358494-1|AAQ88858.1| 347|Homo sapiens CD5L protein. 28 8.8
AL139409-4|CAC19458.1| 347|Homo sapiens CD5 molecule-like protein. 28 8.8
AF011429-1|AAD01446.1| 347|Homo sapiens AIM protein. 28 8.8
>DQ682657-1|ABG89105.1| 546|Homo sapiens tricellulin isoform a1
protein.
Length = 546
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 59 VGGKKPPNGATWYTICGTPFTNRAEYIVLLTTILFLAAGVFYGLYFRTI 107
VGG G +YT TPF + +TTI+ L G+ +Y+RTI
Sbjct: 236 VGGLGSMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGM--SMYYRTI 282
>DQ682656-1|ABG89104.1| 558|Homo sapiens tricellulin isoform a
protein.
Length = 558
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 59 VGGKKPPNGATWYTICGTPFTNRAEYIVLLTTILFLAAGVFYGLYFRTI 107
VGG G +YT TPF + +TTI+ L G+ +Y+RTI
Sbjct: 236 VGGLGSMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGM--SMYYRTI 282
>BC067746-1|AAH67746.1| 280|Homo sapiens C-type lectin domain
family 1, member A protein.
Length = 280
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 44 FCPDQYDEGYFDFHCVGGKKPPNGATWYTICGTPFTNRAEYIVLLTT 90
F Q +F + G +P +G W + GTPFT+ +I++ T
Sbjct: 183 FAASQSYSEFFYSYWTGLLRPDSGKAWLWMDGTPFTSELFHIIIDVT 229
>BC039072-1|AAH39072.1| 280|Homo sapiens C-type lectin domain
family 1, member A protein.
Length = 280
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 44 FCPDQYDEGYFDFHCVGGKKPPNGATWYTICGTPFTNRAEYIVLLTT 90
F Q +F + G +P +G W + GTPFT+ +I++ T
Sbjct: 183 FAASQSYSEFFYSYWTGLLRPDSGKAWLWMDGTPFTSELFHIIIDVT 229
>BC033689-1|AAH33689.1| 558|Homo sapiens MARVEL domain containing 2
protein.
Length = 558
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 59 VGGKKPPNGATWYTICGTPFTNRAEYIVLLTTILFLAAGVFYGLYFRTI 107
VGG G +YT TPF + +TTI+ L G+ +Y+RTI
Sbjct: 236 VGGLGSMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGM--SMYYRTI 282
>AY358587-1|AAQ88950.1| 280|Homo sapiens QAKY569 protein.
Length = 280
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 44 FCPDQYDEGYFDFHCVGGKKPPNGATWYTICGTPFTNRAEYIVLLTT 90
F Q +F + G +P +G W + GTPFT+ +I++ T
Sbjct: 183 FAASQSYSEFFYSYWTGLLRPDSGKAWLWMDGTPFTSELFHIIIDVT 229
>AK075114-1|BAC11410.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ90633 fis, clone PLACE1003573, highly similar to
C-type lectin-like receptor-1. ).
Length = 280
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 44 FCPDQYDEGYFDFHCVGGKKPPNGATWYTICGTPFTNRAEYIVLLTT 90
F Q +F + G +P +G W + GTPFT+ +I++ T
Sbjct: 183 FAASQSYSEFFYSYWTGLLRPDSGKAWLWMDGTPFTSELFHIIIDVT 229
>AK055094-1|BAB70853.1| 457|Homo sapiens protein ( Homo sapiens
cDNA FLJ30532 fis, clone BRAWH2001129, weakly similar to
OCCLUDIN. ).
Length = 457
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 59 VGGKKPPNGATWYTICGTPFTNRAEYIVLLTTILFLAAGVFYGLYFRTI 107
VGG G +YT TPF + +TTI+ L G+ +Y+RTI
Sbjct: 236 VGGLGSMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGM--SMYYRTI 282
>AF200949-1|AAF36830.1| 280|Homo sapiens C-type lectin-like
receptor-1 protein.
Length = 280
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 44 FCPDQYDEGYFDFHCVGGKKPPNGATWYTICGTPFTNRAEYIVLLTT 90
F Q +F + G +P +G W + GTPFT+ +I++ T
Sbjct: 183 FAASQSYSEFFYSYWTGLLRPDSGKAWLWMDGTPFTSELFHIIIDVT 229
>AB219937-1|BAE54514.1| 457|Homo sapiens TRICbeta protein.
Length = 457
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 59 VGGKKPPNGATWYTICGTPFTNRAEYIVLLTTILFLAAGVFYGLYFRTI 107
VGG G +YT TPF + +TTI+ L G+ +Y+RTI
Sbjct: 236 VGGLGSMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGM--SMYYRTI 282
>AB219936-1|BAE54513.1| 558|Homo sapiens TRIC protein.
Length = 558
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 59 VGGKKPPNGATWYTICGTPFTNRAEYIVLLTTILFLAAGVFYGLYFRTI 107
VGG G +YT TPF + +TTI+ L G+ +Y+RTI
Sbjct: 236 VGGLGSMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGM--SMYYRTI 282
>U82812-1|AAB91989.1| 347|Homo sapiens Sp alpha protein.
Length = 347
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 57 HCVGGKKPPNGATWYTICGTPFTNRAEYIV 86
HC G + + WYT+C T ++ RA +V
Sbjct: 146 HCKGRVEVKHQNQWYTVCQTGWSLRAAKVV 175
>BC033586-1|AAH33586.1| 347|Homo sapiens CD5 molecule-like protein.
Length = 347
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 57 HCVGGKKPPNGATWYTICGTPFTNRAEYIV 86
HC G + + WYT+C T ++ RA +V
Sbjct: 146 HCKGRVEVKHQNQWYTVCQTGWSLRAAKVV 175
>AY358494-1|AAQ88858.1| 347|Homo sapiens CD5L protein.
Length = 347
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 57 HCVGGKKPPNGATWYTICGTPFTNRAEYIV 86
HC G + + WYT+C T ++ RA +V
Sbjct: 146 HCKGRVEVKHQNQWYTVCQTGWSLRAAKVV 175
>AL139409-4|CAC19458.1| 347|Homo sapiens CD5 molecule-like protein.
Length = 347
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 57 HCVGGKKPPNGATWYTICGTPFTNRAEYIV 86
HC G + + WYT+C T ++ RA +V
Sbjct: 146 HCKGRVEVKHQNQWYTVCQTGWSLRAAKVV 175
>AF011429-1|AAD01446.1| 347|Homo sapiens AIM protein.
Length = 347
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 57 HCVGGKKPPNGATWYTICGTPFTNRAEYIV 86
HC G + + WYT+C T ++ RA +V
Sbjct: 146 HCKGRVEVKHQNQWYTVCQTGWSLRAAKVV 175
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.324 0.141 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,676,198
Number of Sequences: 224733
Number of extensions: 921066
Number of successful extensions: 1223
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1213
Number of HSP's gapped (non-prelim): 16
length of query: 120
length of database: 73,234,838
effective HSP length: 81
effective length of query: 39
effective length of database: 55,031,465
effective search space: 2146227135
effective search space used: 2146227135
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 59 (27.9 bits)
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