GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000504-TA|BGIBMGA000504-PA|undefined
         (340 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.60 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.60 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.79 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.79 
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    25   1.0  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   4.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   4.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   7.4  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 251  FAIYGTFVIHGLLSDREKSKEKLTLIDYILILQLALHYVIYWIF 294
            F +   F+I  LL  +E +  K  +I Y+ +  + L  VIY +F
Sbjct: 982  FCMAAEFIIAALLHPQEFNCLKYGVIYYVTVPSMYLLLVIYSVF 1025


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 251  FAIYGTFVIHGLLSDREKSKEKLTLIDYILILQLALHYVIYWIF 294
            F +   F+I  LL  +E +  K  +I Y+ +  + L  VIY +F
Sbjct: 982  FCMAAEFIIAALLHPQEFNCLKYGVIYYVTVPSMYLLLVIYSVF 1025


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 270 KEKLTLIDYILILQLALHYVIYWIFVVFFHPEREW--STGL 308
           + K  L+ Y+L   +AL  VI +  ++    E+EW  STGL
Sbjct: 128 RHKKRLLCYLLARYVALALVILFSEILVIVSEQEWSFSTGL 168


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 270 KEKLTLIDYILILQLALHYVIYWIFVVFFHPEREW--STGL 308
           + K  L+ Y+L   +AL  VI +  ++    E+EW  STGL
Sbjct: 146 RHKKRLLCYLLARYVALALVILFSEILVIVSEQEWSFSTGL 186


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 463

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 56 WPYFWLGTVLHGIYADNFWHFVLPEYDNFWHSQTPIIFL 94
          WP+      +  I AD +  F    Y  ++H  TP + L
Sbjct: 2  WPFVVQKKHITEIIADIYRQFPTDRYVGYYHFMTPTLLL 40


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 254 YGTFVIHGLLSDREKSKEKLTLIDYILILQLALHYVIYWIFVVFFHPERE 303
           YG  V    L+   K+K +   +  I++L   + +  Y++  +++  +RE
Sbjct: 254 YGDSVTRSSLAFLGKAKVRTLKMTIIIVLVFFVCWTPYYVMCIWYWLDRE 303


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 254 YGTFVIHGLLSDREKSKEKLTLIDYILILQLALHYVIYWIFVVFFHPERE 303
           YG  V    L+   K+K +   +  I++L   + +  Y++  +++  +RE
Sbjct: 254 YGDSVTRSSLAFLGKAKVRTLKMTIIIVLVFFVCWTPYYVMCIWYWLDRE 303


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 3/26 (11%)

Query: 64  VLHGIYADNFWHFVLPEYDNFWHSQT 89
           VL   YA  +W     +Y++FWH  T
Sbjct: 112 VLTLCYAVYYWR---QQYEDFWHRYT 134


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)

Query: 256 TFVIHGLLSDREKSKEKLTL 275
           T +  GL+ DR KS+EKLT+
Sbjct: 548 TEIYKGLI-DRIKSREKLTM 566


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.327    0.143    0.493 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,283
Number of Sequences: 317
Number of extensions: 4091
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 9
length of query: 340
length of database: 114,650
effective HSP length: 57
effective length of query: 283
effective length of database: 96,581
effective search space: 27332423
effective search space used: 27332423
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 43 (21.4 bits)