GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000504-TA|BGIBMGA000504-PA|undefined
         (340 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.7  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.7  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    26   1.7  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   3.0  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 124 RYAEPFAVGLVTVLIDIPYDIVAVKFVHWTWHDTDPNIFDRHYWVPWNS 172
           RY  P     +   +D P D   V+ +    + TD  I D+ Y + WN+
Sbjct: 13  RYPTPNGYPQINGEVDAPLDFRKVESLRR--NSTDTGIMDQQYCLRWNN 59


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 124 RYAEPFAVGLVTVLIDIPYDIVAVKFVHWTWHDTDPNIFDRHYWVPWNS 172
           RY  P     +   +D P D   V+ +    + TD  I D+ Y + WN+
Sbjct: 13  RYPTPNGYPQINGEVDAPLDFRKVESLRR--NSTDTGIMDQQYCLRWNN 59


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 124 RYAEPFAVGLVTVLIDIPYDIVAVKFVHWTWHDTDPNIFDRHYWVPWNS 172
           RY  P     +   +D P D   V+ +    + TD  I D+ Y + WN+
Sbjct: 13  RYPTPNGYPQINGEVDAPLDFRKVESLRR--NSTDTGIMDQQYCLRWNN 59


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 247 FFLLFAIYGTFVIHGLLSDREKSKEKLTLIDYILILQLALHYVIYWIF 294
           FFL  A+    VI G+L  +E       L+ YI I  + +  VIY +F
Sbjct: 666 FFLAVALQ--IVITGVLHPQEMEALPAGLVYYITIPSMYMLLVIYSVF 711


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.143    0.493 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,359
Number of Sequences: 2123
Number of extensions: 15366
Number of successful extensions: 74
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 74
Number of HSP's gapped (non-prelim): 4
length of query: 340
length of database: 516,269
effective HSP length: 64
effective length of query: 276
effective length of database: 380,397
effective search space: 104989572
effective search space used: 104989572
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 48 (23.4 bits)