Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000503-TA|BGIBMGA000503-PA|undefined
(587 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157... 36 0.068
05_01_0580 + 5210002-5210170,5210466-5210524,5210883-5211668,521... 33 0.48
08_02_0707 - 20212190-20214592 32 1.5
02_04_0591 - 24159654-24160155,24160233-24160316,24160898-241609... 31 2.6
07_03_1013 + 23299569-23300630 31 3.4
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489... 31 3.4
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 31 3.4
05_05_0177 - 22993844-22994617 30 4.5
10_08_1063 - 22628642-22628716,22628806-22629012,22629325-226294... 30 5.9
07_03_1632 + 28271559-28271645,28272641-28272713,28273030-282733... 29 7.8
03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499... 29 7.8
>04_04_0411 -
25014511-25015015,25015098-25015169,25015700-25015734,
25015805-25015873,25015993-25016044,25016444-25016526,
25016625-25016726,25017150-25017884,25017962-25018012,
25018792-25018983,25019066-25019216,25020012-25020193,
25020329-25020532,25020752-25020859
Length = 846
Score = 36.3 bits (80), Expect = 0.068
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 25 TDSNARATHLSRARDDNVKKG-NASGNSECSKRNNMETLAQGENFEGKDATSQEKGSTEN 83
+DS RAT A+DD++K +G E SK+ E L Q E+ + T ++ +
Sbjct: 485 SDSGGRATR-RLAKDDDIKSSFKKTGEGESSKKKQKENLKQQEDTPPDEDTDEDLSLKDI 543
Query: 84 RDEXXXXXXXXXXXXXDDITSNKRQHAEDNQET 116
D +KR+ A++ +ET
Sbjct: 544 VSPKSSAKTGKNKGQAGDSGGSKRKRAQEAEET 576
>05_01_0580 +
5210002-5210170,5210466-5210524,5210883-5211668,
5211898-5212737
Length = 617
Score = 33.5 bits (73), Expect = 0.48
Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
Query: 427 PQMINEFMTQEKERHRLR--IQHLVEKEKLVLAVEQEILRVHGRAERAVANQSLPFSVCT 484
P++ E T+ E LR ++ L E+EK +E ++L +G E+ VA + L +
Sbjct: 145 PRVSEEDATKTPEIFELREMVRSLQEREK---TLELQLLESYGLQEQDVAVRELENQLKI 201
Query: 485 ILRDREVYNV-LAPEQEEKRNAQRSRCNGRQINSWLQEVDDKWEKIKEGMLRRQHTEAQT 543
+ ++Y + + Q E Q ++ S L+ K + +K+ + + +
Sbjct: 202 NTVESKLYTLKIESLQSENERLQAQLTESSKLASELEAARMKCKLLKKKLRQDAEQAKER 261
Query: 544 LHAVQTMGWEWKLKEL 559
+ ++Q M W+ KE+
Sbjct: 262 IASLQEMADSWQCKEI 277
>08_02_0707 - 20212190-20214592
Length = 800
Score = 31.9 bits (69), Expect = 1.5
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 322 INHSSSCLELHPRKRKLKSSKDHSRESKSDS-----TQEASSLSHNITHSNPYQMYIHIR 376
+NH+ +C E H K H S +S T+ + +H+ H + + + H
Sbjct: 533 VNHNGACCEHHGDANKSHHHDHHHDSSNEESHHNSLTENSCKENHSHCHGHDHHHHHHHD 592
Query: 377 KQIHHRQRG 385
HH+Q G
Sbjct: 593 HSEHHQQSG 601
>02_04_0591 -
24159654-24160155,24160233-24160316,24160898-24160944,
24161035-24161103,24161259-24161310,24161693-24161775,
24162312-24162422,24162808-24163211,24163308-24163380,
24163460-24163510,24163882-24164073,24164176-24164302,
24164753-24164934,24165023-24165226,24165738-24165836
Length = 759
Score = 31.1 bits (67), Expect = 2.6
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 20 RIELSTDSNARATHLSRARDDNVKKGNASGNSECSKRNNMETLAQGENFEGKDATSQE-- 77
++E +TDS + + S ++DD+ + + SK+ +L Q + + K+ T+++
Sbjct: 384 KVEETTDSTGKLSKQS-SKDDSKSSTRKASGAGSSKKQQKISLKQKDETDSKEDTAKDLS 442
Query: 78 -KGSTENRDEXXXXXXXXXXXXXDDITSNKRQHAEDNQET 116
K + D+ S +++ ED QET
Sbjct: 443 LKEMVSPKSVSKGSAKTKGSQGQDNNGSKRKRSQEDEQET 482
>07_03_1013 + 23299569-23300630
Length = 353
Score = 30.7 bits (66), Expect = 3.4
Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 365 HSNPYQMYIHIRKQIHHRQRGLFPVKPKPPKDFNKYLMNRCTYTLQRNVNPEPQIEIPHN 424
H + + +H H ++ + +P K + YL LQ +++ EP+ ++ H
Sbjct: 91 HRDEQEEKLHHYLDEEHEKKLQDHLDEEPEKKLHHYLDEEQEKKLQDHLDEEPEKKLHHY 150
Query: 425 LPPQMINEFMTQEKERHRLRIQHLVEKEKLVLAVEQE 461
L + F Q++E + Q+L E +K + + E
Sbjct: 151 LDEEQEKLFQDQDEEEKTPK-QYLDEDQKTLQQCQDE 186
>05_07_0247 + 28643862-28644310,28645151-28645207,28645644-28648950,
28649069-28649144,28649356-28649426,28649524-28649589,
28649677-28649766,28649874-28650050,28650513-28650548
Length = 1442
Score = 30.7 bits (66), Expect = 3.4
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 434 MTQEKERHRLRIQHLV-EKEKLVLAVEQEILRVHGRAERAVANQSLPFSVCTILRDREVY 492
+ +E+ER +L Q E+EK LAVE+ H RA ++ ++ + R+
Sbjct: 1138 IAEERERKKLEEQEREREREKDRLAVERATREAHERAFAEARERAEKIALERVTAARQRA 1197
Query: 493 NVLAPEQEEKRNAQRSRCNGRQINSWLQEVDDKWEKIKEGMLRRQHTEAQTLHA 546
+ A E+EE+ + + + +I + V+ + +E + + E A
Sbjct: 1198 SAEAREKEERASTEAAAERAARIKAERAAVERATAEARERAIEKAKAEKAAAEA 1251
>03_05_0520 +
25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 30.7 bits (66), Expect = 3.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 221 ASPKPHSSKDNSEDTDDQKTQESSGPKVPPLKI 253
A+P S+D +E+T Q++ S P+ PP K+
Sbjct: 268 AAPSLSVSQDQAEETASQESNPESAPQTPPSKV 300
>05_05_0177 - 22993844-22994617
Length = 257
Score = 30.3 bits (65), Expect = 4.5
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 337 KLKSSKDHSRESKSDSTQEAS-SLSHNITHSNPYQMYIHIRKQIHHRQRGLFPVKPKPPK 395
+ +SSK + +D+T A + S +T S+P ++ + L P PP+
Sbjct: 7 RTRSSKSKPAAAAADTTSTALVAASKRLTFSSPSLK--DLQSLLVPPHAALSSSSPSPPR 64
Query: 396 DFNKYLMNRCTYTLQRNVNPEPQIEIPH 423
F++ + C + RN+ Q + PH
Sbjct: 65 VFHRIRVAACALRVLRNLQSAGQQQQPH 92
>10_08_1063 -
22628642-22628716,22628806-22629012,22629325-22629433,
22629547-22629657,22630466-22630513,22630636-22630713,
22632151-22632254,22632360-22632470,22632555-22632791
Length = 359
Score = 29.9 bits (64), Expect = 5.9
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 380 HHRQRGLFPVKPKPPKDFNKYLMNRCTYTLQRNVNPEPQIEIPHNLPPQMINEFMTQEKE 439
HHR++ P+ P K L+N Y N + +P P + M +
Sbjct: 121 HHREKLNLPINPYTVKSLLWQLLNGLNYLHSENTGLHNIVHLPQKSPAFDLLSKMLEYDP 180
Query: 440 RHRLRIQHLVEKE-KLVL 456
R R+ +E E +LV+
Sbjct: 181 RKRITAAQALEHEIRLVI 198
>07_03_1632 +
28271559-28271645,28272641-28272713,28273030-28273361,
28273455-28274791,28275451-28275848,28275963-28277644,
28277727-28277884,28278645-28278802,28279110-28279270,
28279826-28280014
Length = 1524
Score = 29.5 bits (63), Expect = 7.8
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 316 GGKYILINHSSSCLELHPRKRKLKSSKDHSRESKSDSTQEASSLSHNITHSNPYQMYIHI 375
GGK + + S EL P+K K+ + + S +E SS N H+ + +H+
Sbjct: 494 GGKDDTLENGSGLGELRPKKI-WKNDSERDSDMPGTSKREISSSLKNDRHTPAEEQRMHV 552
Query: 376 RKQIHHRQRGLFPVKPKP 393
+ P+ P P
Sbjct: 553 PPSVSAPTANAAPMLPAP 570
>03_05_1122 +
30546314-30549277,30549615-30549693,30549857-30549945,
30550422-30550538,30550873-30551111,30552279-30552365,
30552732-30552831,30553319-30553532,30553617-30553777
Length = 1349
Score = 29.5 bits (63), Expect = 7.8
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 217 KSPVASPKPHSSKDNSEDTDDQKTQESSGPKV 248
+SPVA P ++D S DT+ ++ + SSG K+
Sbjct: 505 ESPVAIPSLKKARDTSSDTELEQPKMSSGKKL 536
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.128 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,910,961
Number of Sequences: 37544
Number of extensions: 523305
Number of successful extensions: 1383
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1379
Number of HSP's gapped (non-prelim): 12
length of query: 587
length of database: 14,793,348
effective HSP length: 86
effective length of query: 501
effective length of database: 11,564,564
effective search space: 5793846564
effective search space used: 5793846564
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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