Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000503-TA|BGIBMGA000503-PA|undefined
(587 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55227| Best HMM Match : Ank (HMM E-Value=1.9e-30) 55 2e-07
SB_38163| Best HMM Match : Complex1_30kDa (HMM E-Value=0.73) 36 0.12
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.28
SB_41392| Best HMM Match : Nanovirus_C8 (HMM E-Value=6.7) 33 0.64
SB_23919| Best HMM Match : Nanovirus_C8 (HMM E-Value=7.2) 33 0.64
SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007) 33 0.85
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_40037| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_16838| Best HMM Match : TolA (HMM E-Value=2) 32 1.5
SB_14204| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 31 2.6
SB_54371| Best HMM Match : ChaB (HMM E-Value=3.9) 31 3.4
SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.4
SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41) 31 3.4
SB_51861| Best HMM Match : RVT_1 (HMM E-Value=1.2e-10) 30 6.0
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 30 6.0
SB_26887| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 30 6.0
SB_7993| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 29 7.9
SB_52234| Best HMM Match : BRF1 (HMM E-Value=0.85) 29 7.9
SB_45659| Best HMM Match : E_Pc_C (HMM E-Value=1.2) 29 7.9
SB_40140| Best HMM Match : SASP_gamma (HMM E-Value=0.36) 29 7.9
>SB_55227| Best HMM Match : Ank (HMM E-Value=1.9e-30)
Length = 662
Score = 54.8 bits (126), Expect = 2e-07
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 427 PQMINEFMTQEKER-HRLRIQHLVEKEKLVLAVEQEILRVHGRAERAVANQSLPFSVCTI 485
P I+E E E +LR H VE+EKL ++ EQE++R+ G R++ + +PF VCTI
Sbjct: 555 PTKISEVKDMESEELSKLRTSHQVEQEKLRISFEQEVVRLFGNFARSLIRRDVPFGVCTI 614
Query: 486 LR------DREVYNVLAPEQEEKRNAQRSR 509
L+ REV + A +A+R R
Sbjct: 615 LKHQMTMQHREVLHPAASNSMRYPSAERIR 644
>SB_38163| Best HMM Match : Complex1_30kDa (HMM E-Value=0.73)
Length = 268
Score = 35.5 bits (78), Expect = 0.12
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 311 KRTIEGGKYILINHSSSCLELHPRKRKLKSSKDHSRESKSDSTQ-EASSLSHNITHSNPY 369
K+ GG + + ++ ++ H RK + + R ++ Q E S L ++H +PY
Sbjct: 98 KKAFRGGH--VNSRKNNRMDFHSRK-----DEPNKRSAEQGGLQSEYSRLRLVLSHIDPY 150
Query: 370 QMYIHIRKQIHHRQRGLFPVKPKPPKDFNKYLMNRC 405
+++ +R+Q+ R + + P++ P + K +RC
Sbjct: 151 KLHSALRRQLKRRNKDVHPLRKVPQRITPKLRKHRC 186
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 34.3 bits (75), Expect = 0.28
Identities = 28/115 (24%), Positives = 48/115 (41%)
Query: 432 EFMTQEKERHRLRIQHLVEKEKLVLAVEQEILRVHGRAERAVANQSLPFSVCTILRDREV 491
E ++ +E R R L EKE+ E +L + R + + + F R+RE+
Sbjct: 1628 EEASRSEEYERQRQLELQEKERRNKEEEDNLLDAYRRKQEQLLEKERIFEEEMARREREL 1687
Query: 492 YNVLAPEQEEKRNAQRSRCNGRQINSWLQEVDDKWEKIKEGMLRRQHTEAQTLHA 546
E+EE+R A+ + Q + D+ E++K+ R E L A
Sbjct: 1688 EERQKREEEERRVAEMEQVKVAQEQHLYAQETDELEQLKKTYEERIEREKGALEA 1742
>SB_41392| Best HMM Match : Nanovirus_C8 (HMM E-Value=6.7)
Length = 295
Score = 33.1 bits (72), Expect = 0.64
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 391 PKPPKD-FNKYLMNRCTYTLQRNVNPEPQIEIPHNLPP 427
P PK+ N++L + T Q+NV P+PQ IP L P
Sbjct: 1 PSSPKNTMNRFLRTQSTPGFQQNVYPQPQTLIPQALAP 38
>SB_23919| Best HMM Match : Nanovirus_C8 (HMM E-Value=7.2)
Length = 308
Score = 33.1 bits (72), Expect = 0.64
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 391 PKPPKD-FNKYLMNRCTYTLQRNVNPEPQIEIPHNLPP 427
P PK+ N++L + T Q+NV P+PQ IP L P
Sbjct: 18 PSSPKNTMNRFLRTQSTPGFQQNVYPQPQTLIPQALAP 55
>SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007)
Length = 881
Score = 32.7 bits (71), Expect = 0.85
Identities = 20/89 (22%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 412 NVNPEPQIEIPHNLPPQMINEFMTQEKERHRLRIQHLVEKEKLVLAVEQEILRVHGRAER 471
+++P+P ++ PPQ I ++KER+R + + +E+++ L E+E+ + ER
Sbjct: 616 HMHPKPNLK--EEKPPQKITSEEQKQKERNRQKHREEMERKREKLQKERELKKAKREKER 673
Query: 472 AVANQSLPFSVCTILRDREVYNVLAPEQE 500
N+ ++ + ++ + ++ PE E
Sbjct: 674 D-ENEKARKTLLELAKE-QALEIVVPEHE 700
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 32.3 bits (70), Expect = 1.1
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 492 YN-VLAPEQEEKRNAQRSRCNGRQINSWLQEVDDKWEKIKEGMLRRQ--HTEAQTL 544
YN LA + K N + N RQ N+ L+E+D+ ++KE + ++Q TE +T+
Sbjct: 2216 YNDALAQLMDRKYNLENDVTNARQFNATLEELDNWIPEVKERVAKQQPISTEPETV 2271
>SB_40037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 31.9 bits (69), Expect = 1.5
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 33 HLSRARDDNVKKGNASGNSECSKRNNMETLAQGENFEGKDATSQEKGSTENRDE 86
H ++ R ++ KKG G ++ +++N+E L + N EG S + G ++ +E
Sbjct: 57 HSTKRRTNSRKKGKLDGGNKSEEKDNLEYL-EKHNGEGDYIDSDDDGENDDNNE 109
>SB_16838| Best HMM Match : TolA (HMM E-Value=2)
Length = 371
Score = 31.9 bits (69), Expect = 1.5
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 324 HSSSCLELHPRKRKLKSSKDHSRESKSDSTQEASSLSHNITHSNPYQMYIHIRKQIHHRQ 383
H S L L +K KLK +K +K D AS + IT +P+Q I + QI Q
Sbjct: 144 HESEQLRLREQKNKLKQNK-----NKEDPESVASDI---ITQGSPWQPQIPTQGQISDYQ 195
Query: 384 R-GLFPVKPKPPK 395
G F + P P+
Sbjct: 196 HLGAFVISPLVPE 208
>SB_14204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 36 RARDDNVKKGNASGNSECSKRNNMETLAQGENFEGKDATSQ--EKGSTENRDE 86
R ++ ++GN GN E ++ N E +G E +D + E+G+ E +E
Sbjct: 9 RCNEEGNEEGNEKGNDEVNEGGNEEGNEEGNEEENEDGNEEENEEGNEEGNEE 61
Score = 29.9 bits (64), Expect = 6.0
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 39 DDNVKKGNASGNSECSKRNNMETLAQGENFEGKDATSQEKGSTENRDEXXXXXXXXXXXX 98
++ ++GN GN E ++ N E +G N EG + ++E+ N +E
Sbjct: 64 EEENEEGNEEGNEEGNEEGNEEGNEEG-NEEGNEEGNEEENEEGNEEENEEGNEEENEEG 122
Query: 99 XDD--ITSNKRQHAEDNQE 115
++ N++++ E N+E
Sbjct: 123 NEEGNEEGNEKENEEGNEE 141
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 39 DDNVKKGNASGNSECSKRNNMETLAQG---ENFEGKDATSQEKGSTENRDEXXXXXXXXX 95
++ ++GN GN E ++ N E +G EN EG + ++E EN +E
Sbjct: 88 EEGNEEGNEEGNEEENEEGNEEENEEGNEEENEEGNEEGNEEGNEKEN-EEGNEEGNEEG 146
Query: 96 XXXXDDITSNKRQHAEDNQE 115
+++ N+ + E+N+E
Sbjct: 147 NEEGNEV-GNEEGNEEENEE 165
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 31.1 bits (67), Expect = 2.6
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 314 IEG-GKYILINHSSSCLE--LHPRKRKLKSSKDHSRESKSDSTQEASSLSHNITHSNPY 369
+EG GK+ +N ++C+ LH +K KDHS E K D+ A LS H PY
Sbjct: 798 VEGVGKFCDLNIFANCMSASLHEFIKK----KDHSTEDKDDTMSTAELLSIMTDHVLPY 852
>SB_54371| Best HMM Match : ChaB (HMM E-Value=3.9)
Length = 557
Score = 30.7 bits (66), Expect = 3.4
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 320 ILINHSSSCLELHPRKRKLKSSKDHSRESKSDST-QEASSLSHNITHSNPYQ 370
+L NH +CL+++ + K+HS E++ + SL++ I N YQ
Sbjct: 296 VLTNHIENCLKINGTEAVKMPDKEHSTETRQMLLFTDTDSLTYEIETENAYQ 347
>SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 30.7 bits (66), Expect = 3.4
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 15 YTYWDRIELSTDSNARATHLSRARDDNVKKGNASGN-SECSKRNNMETLAQGENFEGKDA 73
+ + + LS+ R +A+ DN ++ + +G+ SE KR ++ +GE K+
Sbjct: 103 FAFNSNVFLSSAKKGREKKAPKAQRDNERRESTAGSESERDKRKSLSGDVEGETLHLKEL 162
Query: 74 TSQEKGSTENRDEXXXXXXXXXXXXXD-DITSNKRQHAEDNQETD 117
T ++K E D D + K H D++ D
Sbjct: 163 TPEDKDEDICVWETESSDLSPTKTSPDYDRSLEKDAHLHDDKRDD 207
>SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41)
Length = 1682
Score = 30.7 bits (66), Expect = 3.4
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 30 RATHLSRARDDNVKKGNASGNSECSKRNNMETLAQGENFEGKDA-TSQEKGSTENRDE 86
R T R R++ VKK SGN S + +GK A TS E S+E+ D+
Sbjct: 518 RTTRSERKRNELVKKEVLSGNDSESSLEKQNKKGTQKGKKGKQAKTSPESDSSESSDD 575
>SB_51861| Best HMM Match : RVT_1 (HMM E-Value=1.2e-10)
Length = 1318
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 215 DRKSPVASPKPHSSKDNSEDTDDQKTQESSGPKVPPLKI 253
+ SPV PKP +K N E + Q + S +VP L +
Sbjct: 797 ENPSPVVQPKPKYTKTNKERLEPQMIRASIDMRVPNLSM 835
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 29.9 bits (64), Expect = 6.0
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 9/147 (6%)
Query: 404 RCTYTLQRNVNPEPQIEIPHNLPPQMINEFMTQEKER---HRLRIQHLVE---KEKLVLA 457
R ++ NPE +E+ PQMI + T E E +L ++H E K+K++
Sbjct: 2440 RANNRTEQEENPEKAVEVEKLPGPQMIGQNTTYESEGGLFSKLGLRHPTEPPGKQKIIRQ 2499
Query: 458 VEQEILRVHGRAERAVANQSLPFSVCTILRDREVYNVLAPEQEEKRNAQR-SRCNGRQIN 516
V + + N+S S + V +V AP+Q++ R ++ +
Sbjct: 2500 VSKS--ESEAGPKTGTGNESRADSQQNPTKKVTVASVTAPKQQKMPEEGRFAKLMTNMLA 2557
Query: 517 SWLQEVDDKWEKIKEGMLRRQHTEAQT 543
Q D+ + +E R +++A T
Sbjct: 2558 QPTQNADNSKKPPQEKTQERLNSKADT 2584
>SB_26887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 29.9 bits (64), Expect = 6.0
Identities = 27/140 (19%), Positives = 56/140 (40%), Gaps = 2/140 (1%)
Query: 410 QRNVNPEPQIEIPHNLPPQMINEFMTQEKERHRLRIQHLVEKE-KLVLAVEQEILRVHGR 468
+R+ E ++E+ N+PPQ +E + K + H+ EKE + + Q +
Sbjct: 121 KRSAQAENELEVSENIPPQSQHEPKKEPKINSQAEGLHVKEKEAEHIPEQSQTVALKKAE 180
Query: 469 AERAVANQSLPFSVCTILRDREVYNVLAPEQEEKRNAQRSRCNGRQINSWLQEVDDKWEK 528
R + LP + + L+ ++ + R + + + ++K EK
Sbjct: 181 MHRQETVEKLPVNT-SGLKVEDIPREPRIVEPASRESSDDELEIEVLEKSRNDENEKVEK 239
Query: 529 IKEGMLRRQHTEAQTLHAVQ 548
E + ++H E + H Q
Sbjct: 240 QIELIHEKEHVEPEMRHGDQ 259
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 29.9 bits (64), Expect = 6.0
Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 385 GLFPVKPKPPKDFNKYLMNRCTYTLQRNVNP-EPQIEIPHNLPPQMINEFMTQ--EKERH 441
GL P PP + + T P + + + + N+ + Q EKE+
Sbjct: 272 GLVTAAPSPPDKKQSSVCHTPPKTPSSKTTPADAETKTSPSTTSPQTNKALRQKEEKEKQ 331
Query: 442 RLRIQHLVEKEKLVLAVEQEILRVHGRAERAVANQSLPFSVCTILRDREVYNVLAPEQEE 501
RL + EKE+L ++E R+ +AE+ + + RE + L E++E
Sbjct: 332 RLEAKAAKEKERLEAKQKKEQERLEKQAEKEKKEKER-----LEKKQREEKDRL--EKKE 384
Query: 502 KRNAQRSRCNGRQINSWLQEVDDKWEKIKE 531
K+ ++ R +IN+ ++E + EK K+
Sbjct: 385 KKEEEK-RKKEEEINAKIEEKKKREEKKKQ 413
>SB_7993| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 29.9 bits (64), Expect = 6.0
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 19 DRIELSTDSNARATHLSRARDDNVKKGNASGNSECSKRNNMETLAQGENFEGKDATS--Q 76
D ++ D NA+ + D + NA+ S ++ E A+ EN +GK ATS
Sbjct: 297 DTKAVNLDENAKTDSDGKPTGDEKMENNAA-QSVSDPKSRTEGSAESENQDGKSATSVTG 355
Query: 77 EKGSTENRDE 86
++ S N+D+
Sbjct: 356 KEASGTNKDD 365
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 29.5 bits (63), Expect = 7.9
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 33 HLSRARDDNVKKGNASGNSECSKRNNMETLAQGENFEGKDATSQEKGSTENRDE 86
H +AR N ++G E K N + Q EGK+ Q++ E +E
Sbjct: 227 HQKKARTKNTRRGQEQKTPEEGKNKNHQKQEQKTPEEGKNKNHQKRARIETPEE 280
>SB_52234| Best HMM Match : BRF1 (HMM E-Value=0.85)
Length = 371
Score = 29.5 bits (63), Expect = 7.9
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 216 RKSPVASPKPHSSKDNSEDTDDQK 239
++SP+ASP P S+D+ + DDQK
Sbjct: 202 QQSPLASPPPQLSEDDHLNEDDQK 225
>SB_45659| Best HMM Match : E_Pc_C (HMM E-Value=1.2)
Length = 1244
Score = 29.5 bits (63), Expect = 7.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 506 QRSRCNGRQINSWLQEVDDKWEKIKEGMLRRQHTEA 541
++ R N I +WL+ VD + E + +G LR TEA
Sbjct: 518 KKLRENPHDIAAWLELVDHQQEVVSKGQLRAGFTEA 553
>SB_40140| Best HMM Match : SASP_gamma (HMM E-Value=0.36)
Length = 704
Score = 29.5 bits (63), Expect = 7.9
Identities = 14/47 (29%), Positives = 29/47 (61%)
Query: 322 INHSSSCLELHPRKRKLKSSKDHSRESKSDSTQEASSLSHNITHSNP 368
I++SS+ P+KRKL+ ++H+ E + + AS + +++ S+P
Sbjct: 583 ISNSSNRANNPPQKRKLRDKRNHADEFLARNMGNASRSASDMSQSSP 629
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.128 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,468,059
Number of Sequences: 59808
Number of extensions: 636382
Number of successful extensions: 2041
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2012
Number of HSP's gapped (non-prelim): 39
length of query: 587
length of database: 16,821,457
effective HSP length: 86
effective length of query: 501
effective length of database: 11,677,969
effective search space: 5850662469
effective search space used: 5850662469
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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