GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000503-TA|BGIBMGA000503-PA|undefined
         (587 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    32   0.037
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    32   0.037
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    32   0.037
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    31   0.065
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    24   9.8  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   9.8  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   9.8  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 32.3 bits (70), Expect = 0.037
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 19  DRIELSTDSNARATHLSRARDD-----NVKKGNASGNSECSKRNNMETLAQGEN 67
           DR    TDS  R+  +  +RD+     N    N++ N+  S  NN  T++   N
Sbjct: 167 DRYSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNN 220


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 32.3 bits (70), Expect = 0.037
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 19  DRIELSTDSNARATHLSRARDD-----NVKKGNASGNSECSKRNNMETLAQGEN 67
           DR    TDS  R+  +  +RD+     N    N++ N+  S  NN  T++   N
Sbjct: 167 DRYSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNN 220


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 32.3 bits (70), Expect = 0.037
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 19  DRIELSTDSNARATHLSRARDD-----NVKKGNASGNSECSKRNNMETLAQGEN 67
           DR    TDS  R+  +  +RD+     N    N++ N+  S  NN  T++   N
Sbjct: 119 DRYSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNN 172


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 31.5 bits (68), Expect = 0.065
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 19  DRIELSTDSNARATHLSRARDD-----NVKKGNASGNSECSKRNNMETLAQGEN 67
           DR    TDS  R+  +  +RD+     N    N++ N+  S  NN  T++   N
Sbjct: 167 DRYSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNSSGNNNNNTISSNNN 220


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 9.8
 Identities = 13/54 (24%), Positives = 25/54 (46%)

Query: 315 EGGKYILINHSSSCLELHPRKRKLKSSKDHSRESKSDSTQEASSLSHNITHSNP 368
           E  +Y++  + SS  EL+ R++       ++ E   D+ Q+  S    I +  P
Sbjct: 177 EPHRYVVQRYESSEEELYARRQNCYYYYYYNEEEDDDTYQDYYSCKKRIAYDGP 230


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 9.8
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 6   LATSGFNIWYTYWDRIELSTDSNARATHLSR 36
           + +  FN W T W     +   NA   H SR
Sbjct: 116 IISGDFNAWATEWGSKSTNARGNAVLEHFSR 146


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.2 bits (50), Expect = 9.8
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 498 EQEEKRNAQRSRCNGRQINSWLQEVDDKWEKIKEGMLRRQHTEAQTLHAVQTMGWE 553
           +Q++++  Q+ R   RQ     Q+   + ++ ++   R+Q  + Q  H  Q   W+
Sbjct: 316 QQQQQQRQQQQRQQQRQ-QQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQ 370


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.128    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,402
Number of Sequences: 2123
Number of extensions: 17789
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 24
Number of HSP's gapped (non-prelim): 8
length of query: 587
length of database: 516,269
effective HSP length: 68
effective length of query: 519
effective length of database: 371,905
effective search space: 193018695
effective search space used: 193018695
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 50 (24.2 bits)