Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000503-TA|BGIBMGA000503-PA|undefined
(587 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 35 0.14
Z29094-15|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 34 0.32
Z29094-11|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 34 0.32
Z29094-10|CAA82347.3| 960|Caenorhabditis elegans Hypothetical p... 34 0.32
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 34 0.32
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 33 0.74
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 33 0.74
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 31 1.7
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 31 1.7
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 30 4.0
AF000262-10|AAN60530.1| 350|Caenorhabditis elegans Twik family ... 30 4.0
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 29 6.9
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 29 6.9
Z81128-4|CAB03403.1| 898|Caenorhabditis elegans Hypothetical pr... 29 9.2
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 29 9.2
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 29 9.2
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 29 9.2
U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective phary... 29 9.2
AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein. 29 9.2
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 35.1 bits (77), Expect = 0.14
Identities = 45/216 (20%), Positives = 93/216 (43%), Gaps = 12/216 (5%)
Query: 320 ILINHSSSCLELHPRKRKLKSSK-DHSRESKSDSTQEASSLSHNITHSNPYQMYIHIRKQ 378
+L +H + EL + ++ S K D + SD+ +E S + + Y + I K+
Sbjct: 160 VLDSHEAHRDELKKKDMEIDSLKADFQQIMDSDAFKEGGSTTKRLMEH--YHIEIDNLKE 217
Query: 379 IHHRQRGLFPVKPKPPKDFNKYLMNRCTYTLQRNVNPEPQIEIPHNLPPQMINEFMTQEK 438
H + K +++++ + ++ N E E + Q N+ M + K
Sbjct: 218 AHSEEMYKIKRKYSTLEEYSEEINWELKLKVENLGNLEMNFETVYQ-DLQTANDNMEKYK 276
Query: 439 ERHRLRIQHLVEKEKLVLAVEQEILRVHGRAERAVANQSLPFSVCTILRDREVYNVLAPE 498
RIQ L+E++K + E+EI R +E+ Q L + +DRE+ E
Sbjct: 277 SSESERIQKLLEEQKAEILKEEEIKRKE-LSEQIKKIQELK-DRQNVEKDREI------E 328
Query: 499 QEEKRNAQRSRCNGRQINSWLQEVDDKWEKIKEGML 534
+++ ++S + ++ + D+ ++KI + L
Sbjct: 329 DLKEKIGRKSVLSSTEVEKMAKIFDENYQKIVDAAL 364
>Z29094-15|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 33.9 bits (74), Expect = 0.32
Identities = 29/137 (21%), Positives = 58/137 (42%), Gaps = 6/137 (4%)
Query: 347 ESKSDSTQEASSLSHNITHSNPYQMYIHIRKQIHHRQRGLFPVKPKPPKDFNKYLMNRCT 406
++ S+ + E + + H +P+QM + ++Q H +Q + + Y +
Sbjct: 62 QAMSEDSIEMRDYNSGVHHMHPHQMQMQQQQQHHQQQYNMSYHNHQQQMQQMHYHQQQQQ 121
Query: 407 YTLQRNVNPE---PQIEIPHNLPPQMINEFMTQEKERHRLRIQHLVEKEKLVLA---VEQ 460
Y Q+ + + PQI+ P Q + Q+ ++ +QH+ E L A ++
Sbjct: 122 YQQQQAQHHQMYAPQIQQQQQQPQQQSQQQSAQQPQQSSAALQHVNESSNLSSAGSISDR 181
Query: 461 EILRVHGRAERAVANQS 477
E + G +R A QS
Sbjct: 182 EPEQHGGTPQRPTAPQS 198
>Z29094-11|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 33.9 bits (74), Expect = 0.32
Identities = 29/137 (21%), Positives = 58/137 (42%), Gaps = 6/137 (4%)
Query: 347 ESKSDSTQEASSLSHNITHSNPYQMYIHIRKQIHHRQRGLFPVKPKPPKDFNKYLMNRCT 406
++ S+ + E + + H +P+QM + ++Q H +Q + + Y +
Sbjct: 129 QAMSEDSIEMRDYNSGVHHMHPHQMQMQQQQQHHQQQYNMSYHNHQQQMQQMHYHQQQQQ 188
Query: 407 YTLQRNVNPE---PQIEIPHNLPPQMINEFMTQEKERHRLRIQHLVEKEKLVLA---VEQ 460
Y Q+ + + PQI+ P Q + Q+ ++ +QH+ E L A ++
Sbjct: 189 YQQQQAQHHQMYAPQIQQQQQQPQQQSQQQSAQQPQQSSAALQHVNESSNLSSAGSISDR 248
Query: 461 EILRVHGRAERAVANQS 477
E + G +R A QS
Sbjct: 249 EPEQHGGTPQRPTAPQS 265
>Z29094-10|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 33.9 bits (74), Expect = 0.32
Identities = 29/137 (21%), Positives = 58/137 (42%), Gaps = 6/137 (4%)
Query: 347 ESKSDSTQEASSLSHNITHSNPYQMYIHIRKQIHHRQRGLFPVKPKPPKDFNKYLMNRCT 406
++ S+ + E + + H +P+QM + ++Q H +Q + + Y +
Sbjct: 129 QAMSEDSIEMRDYNSGVHHMHPHQMQMQQQQQHHQQQYNMSYHNHQQQMQQMHYHQQQQQ 188
Query: 407 YTLQRNVNPE---PQIEIPHNLPPQMINEFMTQEKERHRLRIQHLVEKEKLVLA---VEQ 460
Y Q+ + + PQI+ P Q + Q+ ++ +QH+ E L A ++
Sbjct: 189 YQQQQAQHHQMYAPQIQQQQQQPQQQSQQQSAQQPQQSSAALQHVNESSNLSSAGSISDR 248
Query: 461 EILRVHGRAERAVANQS 477
E + G +R A QS
Sbjct: 249 EPEQHGGTPQRPTAPQS 265
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 33.9 bits (74), Expect = 0.32
Identities = 29/137 (21%), Positives = 58/137 (42%), Gaps = 6/137 (4%)
Query: 347 ESKSDSTQEASSLSHNITHSNPYQMYIHIRKQIHHRQRGLFPVKPKPPKDFNKYLMNRCT 406
++ S+ + E + + H +P+QM + ++Q H +Q + + Y +
Sbjct: 129 QAMSEDSIEMRDYNSGVHHMHPHQMQMQQQQQHHQQQYNMSYHNHQQQMQQMHYHQQQQQ 188
Query: 407 YTLQRNVNPE---PQIEIPHNLPPQMINEFMTQEKERHRLRIQHLVEKEKLVLA---VEQ 460
Y Q+ + + PQI+ P Q + Q+ ++ +QH+ E L A ++
Sbjct: 189 YQQQQAQHHQMYAPQIQQQQQQPQQQSQQQSAQQPQQSSAALQHVNESSNLSSAGSISDR 248
Query: 461 EILRVHGRAERAVANQS 477
E + G +R A QS
Sbjct: 249 EPEQHGGTPQRPTAPQS 265
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 32.7 bits (71), Expect = 0.74
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 354 QEASSLSHNITHSNPYQMYIHIRKQIHHRQRGLFPVKPK-----PPKDFNKYLMNRCTYT 408
Q+ S+ S + H + +Q+HHR +G P+ P+ PP M +
Sbjct: 48 QQQSNQSAHFMHQQLQAVQQQQAQQMHHRLQGA-PINPQQFMVPPPTMMQPQQMQQAQ-- 104
Query: 409 LQRNVNPEPQIEIPHNLPPQMINEFMTQEKERHRLRIQH 447
Q+ Q++I H PQM+ + Q H+ QH
Sbjct: 105 -QQQAQQMHQMQIHHQQHPQMMQQHAQQGYHPHQQNQQH 142
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 32.7 bits (71), Expect = 0.74
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 354 QEASSLSHNITHSNPYQMYIHIRKQIHHRQRGLFPVKPK-----PPKDFNKYLMNRCTYT 408
Q+ S+ S + H + +Q+HHR +G P+ P+ PP M +
Sbjct: 172 QQQSNQSAHFMHQQLQAVQQQQAQQMHHRLQGA-PINPQQFMVPPPTMMQPQQMQQAQ-- 228
Query: 409 LQRNVNPEPQIEIPHNLPPQMINEFMTQEKERHRLRIQH 447
Q+ Q++I H PQM+ + Q H+ QH
Sbjct: 229 -QQQAQQMHQMQIHHQQHPQMMQQHAQQGYHPHQQNQQH 266
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/83 (22%), Positives = 43/83 (51%)
Query: 431 NEFMTQEKERHRLRIQHLVEKEKLVLAVEQEILRVHGRAERAVANQSLPFSVCTILRDRE 490
NE M K+ + L+I L ++ K + A+++E L+V +++R + ++ S L+ +
Sbjct: 665 NEQMKAIKQEYELKITDLRKELKKIEALDKEHLKVIAKSQRELQEKTRLKSEVVDLKKAK 724
Query: 491 VYNVLAPEQEEKRNAQRSRCNGR 513
V + +++K+ + N R
Sbjct: 725 VELIKKMNEDKKKQKTQQLANAR 747
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/83 (22%), Positives = 43/83 (51%)
Query: 431 NEFMTQEKERHRLRIQHLVEKEKLVLAVEQEILRVHGRAERAVANQSLPFSVCTILRDRE 490
NE M K+ + L+I L ++ K + A+++E L+V +++R + ++ S L+ +
Sbjct: 665 NEQMKAIKQEYELKITDLRKELKKIEALDKEHLKVIAKSQRELQEKTRLKSEVVDLKKAK 724
Query: 491 VYNVLAPEQEEKRNAQRSRCNGR 513
V + +++K+ + N R
Sbjct: 725 VELIKKMNEDKKKQKTQQLANAR 747
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/83 (22%), Positives = 43/83 (51%)
Query: 431 NEFMTQEKERHRLRIQHLVEKEKLVLAVEQEILRVHGRAERAVANQSLPFSVCTILRDRE 490
NE M K+ + L+I L ++ K + A+++E L+V +++R + ++ S L+ +
Sbjct: 669 NEQMKAIKQEYELKITDLRKELKKIEALDKEHLKVIAKSQRELQEKTRLKSEVVDLKKAK 728
Query: 491 VYNVLAPEQEEKRNAQRSRCNGR 513
V + +++K+ + N R
Sbjct: 729 VELIKKMNEDKKKQKTQQLANAR 751
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 30.3 bits (65), Expect = 4.0
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 335 KRKLKSSKDHSRESKSDSTQEASSLSHNITHSN-----PYQMYIHIRKQIHHRQRGLFPV 389
+RK + +D RE K D H + S P+Q+ R++ R+R P
Sbjct: 18 ERKRREDRDRDRERKRDRKDRERKRRHRSSSSEGSQAEPHQLGSIFREERRRRERNESPK 77
Query: 390 KPKPP 394
P PP
Sbjct: 78 LPPPP 82
>AF000262-10|AAN60530.1| 350|Caenorhabditis elegans Twik family of
potassium channelsprotein 37 protein.
Length = 350
Score = 30.3 bits (65), Expect = 4.0
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 428 QMINEFMTQEKERHRLRIQHLVEKEKLVLAVEQEILRVHGRAERAVANQSLPFSVCTILR 487
++IN+F+ ++ E+ QHLV K+ ++ VE++ RAER P + TILR
Sbjct: 7 RLINKFIKRQMEKSSPETQHLVRKQSILKFVERK-----SRAER-----PKPTKLRTILR 56
Query: 488 DREVYNVL 495
+N +
Sbjct: 57 KIRKFNTI 64
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 29.5 bits (63), Expect = 6.9
Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 24 STDSNARATHLSRARDDNVKKGNASGNSECSKRNNMETLAQGENFEGKDATSQEKGSTEN 83
S+DS++ ++ S + + KK + E SK+ E + + + + K A S EN
Sbjct: 718 SSDSSSDSSSSSESEPEPPKKKKKKNSEESSKKKEKENIGRRDRGD-KRAERHRDQSVEN 776
Query: 84 RDEXXXXXXXXXXXXXDDITSNKRQHAEDNQETD 117
+D+ + +++ ++D + D
Sbjct: 777 KDKDRRRRQDSDENRRPERGDDRKDRSKDRRRQD 810
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 29.5 bits (63), Expect = 6.9
Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 24 STDSNARATHLSRARDDNVKKGNASGNSECSKRNNMETLAQGENFEGKDATSQEKGSTEN 83
S+DS++ ++ S + + KK + E SK+ E + + + + K A S EN
Sbjct: 718 SSDSSSDSSSSSESEPEPPKKKKKKNSEESSKKKEKENIGRRDRGD-KRAERHRDQSVEN 776
Query: 84 RDEXXXXXXXXXXXXXDDITSNKRQHAEDNQETD 117
+D+ + +++ ++D + D
Sbjct: 777 KDKDRRRRQDSDENRRPERGDDRKDRSKDRRRQD 810
>Z81128-4|CAB03403.1| 898|Caenorhabditis elegans Hypothetical
protein T23D8.4 protein.
Length = 898
Score = 29.1 bits (62), Expect = 9.2
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 413 VNPEPQIEIPHNLPPQMINEFMTQEKERHRLRIQHLVEKEKLVLAVEQEIL 463
V+ +P+ E+ H++ + +NE M+ +R R QH+ KL+ E++ L
Sbjct: 291 VHFDPKEEVTHDVMIKKLNEVMSARGKRTTDRNQHVANLRKLLEVSEEKEL 341
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 29.1 bits (62), Expect = 9.2
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 323 NHSSSCLELHPRKRKLKSSKDHSRESKSDSTQEASSLSHNITHSNPYQMYIHIRK--QIH 380
N S + + + L+S+ ++S ST+ + S+ ++ YQ+ ++K Q+
Sbjct: 252 NDEFSGADFYTIQYSLQSTPNNSTNMTIPSTESSISICDSMLQGEAYQIIATVQKGGQVS 311
Query: 381 HRQRGLFPVKPKPPKDF 397
F ++P PP DF
Sbjct: 312 EPLITKFQLRPLPPIDF 328
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 29.1 bits (62), Expect = 9.2
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 323 NHSSSCLELHPRKRKLKSSKDHSRESKSDSTQEASSLSHNITHSNPYQMYIHIRK--QIH 380
N S + + + L+S+ ++S ST+ + S+ ++ YQ+ ++K Q+
Sbjct: 252 NDEFSGADFYTIQYSLQSTPNNSTNMTIPSTESSISICDSMLQGEAYQIIATVQKGGQVS 311
Query: 381 HRQRGLFPVKPKPPKDF 397
F ++P PP DF
Sbjct: 312 EPLITKFQLRPLPPIDF 328
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 29.1 bits (62), Expect = 9.2
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 22 ELSTDSNARATHLSRARDDNVKKGNASGNSECSKRNNMETLAQGENFEGKDATSQEK 78
+L T+ R L R N+ K A E KR+N+E A E E K A QE+
Sbjct: 398 DLGTEETRRKEALKR-HQANISKAEAEKEKEVKKRSNLE--AAPEKAERKIAKCQEE 451
>U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective pharynx
development protein2 protein.
Length = 225
Score = 29.1 bits (62), Expect = 9.2
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 492 YNVLAPEQEEKRNAQRSRCNGRQINSWLQEVDDKWEKIKE 531
+ L+P QE K+ A+ + RQ+ +W Q KW ++++
Sbjct: 157 HKYLSP-QERKKLAKSLSLSERQVKTWFQNRRAKWRRVRK 195
>AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein.
Length = 170
Score = 29.1 bits (62), Expect = 9.2
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 492 YNVLAPEQEEKRNAQRSRCNGRQINSWLQEVDDKWEKIKE 531
+ L+P QE K+ A+ + RQ+ +W Q KW ++++
Sbjct: 102 HKYLSP-QERKKLAKSLSLSERQVKTWFQNRRAKWRRVRK 140
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.128 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,021,437
Number of Sequences: 27539
Number of extensions: 472995
Number of successful extensions: 1514
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1506
Number of HSP's gapped (non-prelim): 28
length of query: 587
length of database: 12,573,161
effective HSP length: 85
effective length of query: 502
effective length of database: 10,232,346
effective search space: 5136637692
effective search space used: 5136637692
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)
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