Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000502-TA|BGIBMGA000502-PA|IPR002110|Ankyrin
         (187 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   6.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.2  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 5/31 (16%)

Query: 156 DPFVKNSKGKMPSDYAAPHIYEYLQSLKGML 186
           D F++ S+     D   PH+ EY++SL  ++
Sbjct: 44  DAFIRTSE-----DDNDPHVNEYVESLASII 69


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 5/31 (16%)

Query: 156 DPFVKNSKGKMPSDYAAPHIYEYLQSLKGML 186
           D F++ S+     D   PH+ EY++SL  ++
Sbjct: 358 DAFIRTSE-----DDNDPHVNEYVESLASII 383


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 5/31 (16%)

Query: 156 DPFVKNSKGKMPSDYAAPHIYEYLQSLKGML 186
           D F++ S+     D   PH+ EY++SL  ++
Sbjct: 591 DAFIRTSE-----DDNDPHVNEYVESLASII 616


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 5/31 (16%)

Query: 156 DPFVKNSKGKMPSDYAAPHIYEYLQSLKGML 186
           D F++ S+     D   PH+ EY++SL  ++
Sbjct: 591 DAFIRTSE-----DDNDPHVNEYVESLASII 616


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.133    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,782
Number of Sequences: 317
Number of extensions: 1307
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 187
length of database: 114,650
effective HSP length: 53
effective length of query: 134
effective length of database: 97,849
effective search space: 13111766
effective search space used: 13111766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)