GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000502-TA|BGIBMGA000502-PA|IPR002110|Ankyrin
         (187 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          41   3e-05
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   1.9  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 40.7 bits (91), Expect = 3e-05
 Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 1/103 (0%)

Query: 62  NERGETPLHVASIRGDHDQVKKLIDQGQDPDVPDFAGWTPLHEACSYGWYQXXXXXXXXX 121
           N+R ET LH+A        VK L+  G      D+ G TPLH A                
Sbjct: 781 NDRNETGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRAVVENVPDMVRLLLLQG 840

Query: 122 XXXXXXXXDDD-TPLHDATTSGNLKMVKFLIEHGADPFVKNSK 163
                   DD  T L  A  + NLK+ + L+E GA    K+ K
Sbjct: 841 GLRLDCTNDDGLTALQAAVYARNLKITRILLEAGASVREKDLK 883


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 62  NERGETPLHVASIRGDHDQVKKLIDQG 88
           N  G TPL VA +  +    K L+ QG
Sbjct: 458 NSDGLTPLDVAVLSNNRSMTKMLLQQG 484


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.133    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,051
Number of Sequences: 2123
Number of extensions: 5235
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 3
length of query: 187
length of database: 516,269
effective HSP length: 60
effective length of query: 127
effective length of database: 388,889
effective search space: 49388903
effective search space used: 49388903
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)