Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000501-TA|BGIBMGA000501-PA|undefined
         (55 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   0.56 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          19   3.9  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 0.56
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 19  LIDVVKQDVGTTNDGNTARGFFRDAEGT 46
           L+D  + D+G+ + G    G F +  GT
Sbjct: 263 LVDASQHDLGSPSSGPAPPGDFTENMGT 290


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 19.0 bits (37), Expect = 3.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query: 4   GRNAVGGMVQVECGL 18
           G+N VGG V    G+
Sbjct: 258 GKNCVGGKVDETAGV 272


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.139    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,276
Number of Sequences: 317
Number of extensions: 310
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 55
length of database: 114,650
effective HSP length: 35
effective length of query: 20
effective length of database: 103,555
effective search space:  2071100
effective search space used:  2071100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.6 bits)
S2: 34 (17.8 bits)