Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000501-TA|BGIBMGA000501-PA|undefined
         (55 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   1.6  

>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 87

 Score = 20.6 bits (41), Expect = 1.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 31 NDGNTARGFFRDAEGTAR 48
          +DG T  GF  D++G  R
Sbjct: 26 SDGQTDEGFVGDSQGFFR 43


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.139    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,482
Number of Sequences: 429
Number of extensions: 320
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 55
length of database: 140,377
effective HSP length: 35
effective length of query: 20
effective length of database: 125,362
effective search space:  2507240
effective search space used:  2507240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.0 bits)
S2: 35 (18.2 bits)