GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000501-TA|BGIBMGA000501-PA|undefined
         (55 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4KAD8 Cluster: Putative DNA-mediated transposase; n=1;...    53   1e-06
UniRef50_Q17F27 Cluster: Out at first protein; n=3; Culicidae|Re...    42   0.003
UniRef50_Q1D2L2 Cluster: Putative uncharacterized protein; n=2; ...    32   2.6  
UniRef50_UPI0000F20064 Cluster: PREDICTED: similar to LOC560949 ...    31   4.6  

>UniRef50_A4KAD8 Cluster: Putative DNA-mediated transposase; n=1;
           Helicoverpa zea|Rep: Putative DNA-mediated transposase -
           Heliothis zea (Corn earworm) (Bollworm)
          Length = 489

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 25/41 (60%), Positives = 29/41 (70%)

Query: 15  ECGLLIDVVKQDVGTTNDGNTARGFFRDAEGTARITGIHKD 55
           +  LLID+VKQ  GTTNDGNTAR FF   + TA ITG  +D
Sbjct: 320 DLNLLIDIVKQGSGTTNDGNTARRFFEFPDKTAAITGFDED 360


>UniRef50_Q17F27 Cluster: Out at first protein; n=3; Culicidae|Rep:
           Out at first protein - Aedes aegypti (Yellowfever
           mosquito)
          Length = 613

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 15  ECGLLIDVVKQDVGTTNDGNTARGFFRDAEGTARITGIHKD 55
           E GL ++      G +NDGNTAR FFR+ E  A ITG++++
Sbjct: 349 ELGLRLNEPLPGGGNSNDGNTARRFFREVEKVASITGLNRN 389


>UniRef50_Q1D2L2 Cluster: Putative uncharacterized protein; n=2;
           Cystobacterineae|Rep: Putative uncharacterized protein -
           Myxococcus xanthus (strain DK 1622)
          Length = 281

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 13  QVECGLLIDVVKQDVGTTNDGNTARGFFRDAEGTARITGIH 53
           Q +CGLL+DV    V   N G  AR F  DA    R+  IH
Sbjct: 172 QADCGLLLDVNNVYVNARNHGYDARAFV-DALPLERVVQIH 211


>UniRef50_UPI0000F20064 Cluster: PREDICTED: similar to LOC560949
           protein; n=2; Danio rerio|Rep: PREDICTED: similar to
           LOC560949 protein - Danio rerio
          Length = 583

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 1   MVHGRNAVGGMVQVECGLLIDVVKQDVGTTNDGNTARGFFRDA-EGTARITGIHK 54
           +V  +++VG    +EC  ++ V K  VG +  GNT  G  R A E  AR+T I K
Sbjct: 252 LVRSKSSVGTEKSLECVRIVLVGKTGVGKSATGNTILG--RSAFESRARMTSITK 304


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.320    0.139    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,416,730
Number of Sequences: 1657284
Number of extensions: 1791058
Number of successful extensions: 2997
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2995
Number of HSP's gapped (non-prelim): 4
length of query: 55
length of database: 575,637,011
effective HSP length: 35
effective length of query: 20
effective length of database: 517,632,071
effective search space: 10352641420
effective search space used: 10352641420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)