GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000501-TA|BGIBMGA000501-PA|undefined
         (55 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023555-1|AAY84955.1|  206|Drosophila melanogaster IP09736p pro...    25   9.6  
BT023544-1|AAY84944.1|  206|Drosophila melanogaster IP09836p pro...    25   9.6  
BT023527-1|AAY84927.1|  280|Drosophila melanogaster IP09936p pro...    25   9.6  
AE014296-2608|AAF49560.2|  284|Drosophila melanogaster CG17028-P...    25   9.6  

>BT023555-1|AAY84955.1|  206|Drosophila melanogaster IP09736p
           protein.
          Length = 206

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 9   GGMVQVECGLLIDVVKQDVGTTNDGNTARGFFRDAEGTARITG 51
           GG V    G   DV+K D   T+    A+   +  EG  +I+G
Sbjct: 160 GGRVYHTSGARFDVMKPDCVCTSSEELAKSVIQLIEGADQISG 202


>BT023544-1|AAY84944.1|  206|Drosophila melanogaster IP09836p
           protein.
          Length = 206

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 9   GGMVQVECGLLIDVVKQDVGTTNDGNTARGFFRDAEGTARITG 51
           GG V    G   DV+K D   T+    A+   +  EG  +I+G
Sbjct: 160 GGRVYHTSGARFDVMKPDCVCTSSEELAKSVIQLIEGADQISG 202


>BT023527-1|AAY84927.1|  280|Drosophila melanogaster IP09936p
           protein.
          Length = 280

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 9   GGMVQVECGLLIDVVKQDVGTTNDGNTARGFFRDAEGTARITG 51
           GG V    G   DV+K D   T+    A+   +  EG  +I+G
Sbjct: 234 GGRVYHTSGARFDVMKPDCVCTSSEELAKSVIQLIEGADQISG 276


>AE014296-2608|AAF49560.2|  284|Drosophila melanogaster CG17028-PA
           protein.
          Length = 284

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 9   GGMVQVECGLLIDVVKQDVGTTNDGNTARGFFRDAEGTARITG 51
           GG V    G   DV+K D   T+    A+   +  EG  +I+G
Sbjct: 238 GGRVYHTSGARFDVMKPDCVCTSSEELAKSVIQLIEGADQISG 280


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.139    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,622,732
Number of Sequences: 52641
Number of extensions: 74154
Number of successful extensions: 121
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117
Number of HSP's gapped (non-prelim): 4
length of query: 55
length of database: 24,830,863
effective HSP length: 36
effective length of query: 19
effective length of database: 22,935,787
effective search space: 435779953
effective search space used: 435779953
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)