GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000499-TA|BGIBMGA000499-PA|undefined
         (265 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022200-1|AAY51594.1|  751|Drosophila melanogaster IP01101p pro...    54   3e-07
AE014296-685|AAF47785.1|  109|Drosophila melanogaster CG12029-PA...    53   5e-07
AY060248-1|AAL25287.1|  311|Drosophila melanogaster GH07217p pro...    33   0.31 
AY058645-1|AAL13874.1|  850|Drosophila melanogaster LD34489p pro...    33   0.31 
AE013599-3971|AAF47285.1|  536|Drosophila melanogaster CG30420-P...    33   0.31 
AE013599-3967|AAF47283.2|  850|Drosophila melanogaster CG30420-P...    33   0.31 

>BT022200-1|AAY51594.1|  751|Drosophila melanogaster IP01101p
           protein.
          Length = 751

 Score = 53.6 bits (123), Expect = 3e-07
 Identities = 33/119 (27%), Positives = 42/119 (35%)

Query: 143 PPSRLVYMSPLTPPGSDQGSPGNSMQGGXXXXXXXXXXXXXXXXXXQVQPHPGSHLHHQQ 202
           PP +  ++  L  P       G +  G                   Q Q  P      QQ
Sbjct: 552 PPYQQGHVMGLINPPPTLQLLGGAATGSNNSCTTTLTTLTPASAIQQQQQQPQQQQVPQQ 611

Query: 203 TMPQTLXXXXXXXXXXXXXXXXXXXLQHSRLAPPPPMKYNRRNNPELEKRRVHHCDFMG 261
             P T                       + L     ++YNRRNNPELEKRR+HHCDF+G
Sbjct: 612 QPPPTPRSSGGGRRGRHSHHQPGTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVG 670



 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 22/84 (26%)

Query: 52  DDAFLRPALWEDIASSIRNIDPENANMLAPLGATHVKXXXXXXXXX-------------- 97
           DD + RP LW+DI +SI+NIDPENA ML+  G+++                         
Sbjct: 223 DDPYQRPVLWDDITTSIQNIDPENALMLSSSGSSNNNGSSNSSSNTGESATSQLPQVKME 282

Query: 98  --------XXXTPLLSPLEIKTER 113
                      TPLLSPLEIKTE+
Sbjct: 283 AIDESLLETFSTPLLSPLEIKTEK 306



 Score = 37.1 bits (82), Expect = 0.025
 Identities = 15/23 (65%), Positives = 19/23 (82%)

Query: 145 SRLVYMSPLTPPGSDQGSPGNSM 167
           SR +++ PLTPP SD GSPG+SM
Sbjct: 513 SRHMFVPPLTPPSSDPGSPGSSM 535


>AE014296-685|AAF47785.1|  109|Drosophila melanogaster CG12029-PA
           protein.
          Length = 109

 Score = 52.8 bits (121), Expect = 5e-07
 Identities = 19/23 (82%), Positives = 23/23 (100%)

Query: 239 MKYNRRNNPELEKRRVHHCDFMG 261
           ++YNRRNNPELEKRR+HHCDF+G
Sbjct: 6   VRYNRRNNPELEKRRIHHCDFVG 28


>AY060248-1|AAL25287.1|  311|Drosophila melanogaster GH07217p
           protein.
          Length = 311

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 15  QVNNRKTSELESLLCKQEGASLAPAHMDLFDGGTSSRDDAFLRPAL 60
           Q   +   EL +L+ K +  S AP+H+ L +GG SS++   LR  L
Sbjct: 234 QSKEQPPHELNALINKLQKQSKAPSHLTLVNGGDSSQEQIVLRQHL 279


>AY058645-1|AAL13874.1|  850|Drosophila melanogaster LD34489p
           protein.
          Length = 850

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 15  QVNNRKTSELESLLCKQEGASLAPAHMDLFDGGTSSRDDAFLRPAL 60
           Q   +   EL +L+ K +  S AP+H+ L +GG SS++   LR  L
Sbjct: 590 QSKEQPPHELNALINKLQKQSKAPSHLTLVNGGDSSQEQIVLRQHL 635


>AE013599-3971|AAF47285.1|  536|Drosophila melanogaster CG30420-PB,
           isoform B protein.
          Length = 536

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 15  QVNNRKTSELESLLCKQEGASLAPAHMDLFDGGTSSRDDAFLRPAL 60
           Q   +   EL +L+ K +  S AP+H+ L +GG SS++   LR  L
Sbjct: 276 QSKEQPPHELNALINKLQKQSKAPSHLTLVNGGDSSQEQIVLRQHL 321


>AE013599-3967|AAF47283.2|  850|Drosophila melanogaster CG30420-PA,
           isoform A protein.
          Length = 850

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 15  QVNNRKTSELESLLCKQEGASLAPAHMDLFDGGTSSRDDAFLRPAL 60
           Q   +   EL +L+ K +  S AP+H+ L +GG SS++   LR  L
Sbjct: 590 QSKEQPPHELNALINKLQKQSKAPSHLTLVNGGDSSQEQIVLRQHL 635


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.315    0.132    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,299,338
Number of Sequences: 52641
Number of extensions: 435568
Number of successful extensions: 1535
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1526
Number of HSP's gapped (non-prelim): 9
length of query: 265
length of database: 24,830,863
effective HSP length: 84
effective length of query: 181
effective length of database: 20,409,019
effective search space: 3694032439
effective search space used: 3694032439
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)