Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000498-TA|BGIBMGA000498-PA|undefined
(271 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g37860.1 68418.m04559 copper-binding family protein similar t... 33 0.20
At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911... 33 0.20
At1g17440.2 68414.m02133 transcription initiation factor IID (TF... 32 0.36
At1g17440.1 68414.m02132 transcription initiation factor IID (TF... 32 0.36
At2g30590.1 68415.m03727 WRKY family transcription factor 32 0.47
At5g62165.2 68418.m07803 MADS-box protein (AGL42) 31 0.62
At5g62165.1 68418.m07802 MADS-box protein (AGL42) 31 0.62
At1g25540.1 68414.m03171 phytochrome and flowering time regulato... 31 0.62
At1g30330.1 68414.m03709 auxin-responsive factor (ARF6) identica... 30 1.4
At2g42440.1 68415.m05251 LOB domain protein 17 / lateral organ b... 29 2.5
At1g15780.1 68414.m01893 expressed protein 29 2.5
At5g62090.2 68418.m07793 expressed protein 29 3.3
At5g62090.1 68418.m07792 expressed protein 29 3.3
At4g04790.1 68417.m00701 pentatricopeptide (PPR) repeat-containi... 29 3.3
At5g55580.1 68418.m06929 mitochondrial transcription termination... 29 4.4
At1g72390.1 68414.m08373 expressed protein 29 4.4
At1g68790.1 68414.m07863 expressed protein 29 4.4
At2g37080.1 68415.m04550 myosin heavy chain-related low similari... 28 5.8
At5g27000.1 68418.m03221 kinesin motor protein-related non-conse... 28 7.7
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 28 7.7
At3g17820.1 68416.m02272 glutamine synthetase (GS1) identical to... 28 7.7
At2g35630.1 68415.m04369 microtubule organization 1 protein (MOR... 28 7.7
At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyo... 28 7.7
At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyo... 28 7.7
>At5g37860.1 68418.m04559 copper-binding family protein similar to
copper homeostasis factor gi:3168840 from Arabidopsis
thaliana; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 262
Score = 33.1 bits (72), Expect = 0.20
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 51 DAPSEENNLMVMSPSYMSDASDAFTNSY--HRTSQLAHGGVAN---VNEHPCYGSMMFPQ 105
+ P NN + P+ M D ++N+Y T + GG N VNE +G MM +
Sbjct: 159 EIPQRHNNYEDVKPNLMRDMDLGYSNAYPAAETMNMQIGGRVNNMMVNERGFHGQMMNER 218
Query: 106 SY--KAGSEPALVPQ 118
+ + + P+LVPQ
Sbjct: 219 GFHGQMMNGPSLVPQ 233
>At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911:
Plant protein of unknown function (DUF869)
Length = 982
Score = 33.1 bits (72), Expect = 0.20
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 161 EQLQRKHEE---LQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYAN---TEETQQ 214
+ +Q+ H+E L + +L +EE + +KE L R LQ N+ AN T E Q
Sbjct: 345 DNMQKFHKENDLLTERLLAMEEETKMLKEALA-KRNSELQVSRNLCAKTANRLQTLEAQM 403
Query: 215 MQRLPTQVSYDRPAQRSISGYSQTQPP 241
M + PT+ ++ PA+ S + + PP
Sbjct: 404 MSKSPTKRGFEMPAE-IFSRQNASNPP 429
>At1g17440.2 68414.m02133 transcription initiation factor IID
(TFIID) subunit A family protein similar to SP|Q16514
Transcription initiation factor TFIID 20/15 kDa subunits
(TAFII-20/TAFII-15) {Homo sapiens}; contains Pfam
profile PF03847: Transcription initiation factor TFIID
subunit A
Length = 683
Score = 32.3 bits (70), Expect = 0.36
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEE-TQQ 214
Q Q Q+QL M L QQ+ + +++Q ++LG Q +N + ++ QQ
Sbjct: 400 QQQQQQQLSSPQLHQSSMSLNQQQISQIIQQQQQQSQLG--QSQMNQSHSQQQLQQMQQQ 457
Query: 215 MQRLPTQVSYDRPAQRSISGYSQTQPPP 242
+Q+ P Q + Q+ +Q QP P
Sbjct: 458 LQQQPQQQMQQQQQQQQQMQINQQQPSP 485
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/34 (32%), Positives = 24/34 (70%)
Query: 155 DQAQIQEQLQRKHEELQQMILRQQEELRQVKEQL 188
+Q+ Q+QLQ+ ++LQQ +Q ++ +Q ++Q+
Sbjct: 443 NQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQM 476
>At1g17440.1 68414.m02132 transcription initiation factor IID
(TFIID) subunit A family protein similar to SP|Q16514
Transcription initiation factor TFIID 20/15 kDa subunits
(TAFII-20/TAFII-15) {Homo sapiens}; contains Pfam
profile PF03847: Transcription initiation factor TFIID
subunit A
Length = 683
Score = 32.3 bits (70), Expect = 0.36
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEE-TQQ 214
Q Q Q+QL M L QQ+ + +++Q ++LG Q +N + ++ QQ
Sbjct: 400 QQQQQQQLSSPQLHQSSMSLNQQQISQIIQQQQQQSQLG--QSQMNQSHSQQQLQQMQQQ 457
Query: 215 MQRLPTQVSYDRPAQRSISGYSQTQPPP 242
+Q+ P Q + Q+ +Q QP P
Sbjct: 458 LQQQPQQQMQQQQQQQQQMQINQQQPSP 485
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/34 (32%), Positives = 24/34 (70%)
Query: 155 DQAQIQEQLQRKHEELQQMILRQQEELRQVKEQL 188
+Q+ Q+QLQ+ ++LQQ +Q ++ +Q ++Q+
Sbjct: 443 NQSHSQQQLQQMQQQLQQQPQQQMQQQQQQQQQM 476
>At2g30590.1 68415.m03727 WRKY family transcription factor
Length = 380
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLAR 192
Q Q Q+Q Q+ HE LQ L QQ++L++ + +L+L +
Sbjct: 169 QQQQQQQQQQFHERLQAHHLHQQQQLQKHQAELMLRK 205
>At5g62165.2 68418.m07803 MADS-box protein (AGL42)
Length = 210
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 157 AQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQMQ 216
+Q+Q L + E Q+ Q E+L+ ++QLL + + Q NV NP+ + QQ +
Sbjct: 129 SQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQK--NVINPWRGSSTDQQQE 186
Query: 217 R 217
+
Sbjct: 187 K 187
>At5g62165.1 68418.m07802 MADS-box protein (AGL42)
Length = 210
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 157 AQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQMQ 216
+Q+Q L + E Q+ Q E+L+ ++QLL + + Q NV NP+ + QQ +
Sbjct: 129 SQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQK--NVINPWRGSSTDQQQE 186
Query: 217 R 217
+
Sbjct: 187 K 187
>At1g25540.1 68414.m03171 phytochrome and flowering time regulatory
protein (PFT1) PMID: 12815435
Length = 836
Score = 31.5 bits (68), Expect = 0.62
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 156 QAQIQEQLQRK-HEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQ 214
Q QIQ+Q Q++ H + QQM QQ++ + ++Q +L LQ ++ QQ
Sbjct: 696 QQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQLSQLQH----HQQQQQQQQQQQ 751
Query: 215 MQRLPTQVSYDRPAQRSISGYSQTQ 239
Q TQ+ + Q+ S +Q Q
Sbjct: 752 QQHQLTQLQHHHQQQQQASPLNQMQ 776
>At1g30330.1 68414.m03709 auxin-responsive factor (ARF6) identical
to ARF6 [Arabidopsis thaliana] GI:4102600 (Science 276
(5320), 1865-1868 (1997))
Length = 933
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQM 215
Q Q+ +Q Q++ + QQ L QQ++ + ++Q A LG+ P + P A ++ +
Sbjct: 500 QQQLSQQQQQQLSQQQQQQLSQQQQQQLSQQQQQQAYLGV--PETHQPQSQAQSQSNNHL 557
Query: 216 QRLPTQV 222
+ QV
Sbjct: 558 SQQQQQV 564
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 157 AQIQEQLQRKHEELQQMILRQQEELRQVKEQLL 189
+Q Q+QL ++ ++ QQ+ +QQ++L Q ++Q L
Sbjct: 487 SQQQQQLSQQQQQQQQLSQQQQQQLSQQQQQQL 519
>At2g42440.1 68415.m05251 LOB domain protein 17 / lateral organ
boundaries domain protein 17 (LBD17) nearly identical to
SP|Q9SLB6 LOB domain protein 17 {Arabidopsis thaliana};
identical to ASYMMETRIC LEAVES2-like protein 15
[Arabidopsis thaliana] GI:19919001
Length = 187
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 170 LQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTE 210
LQQ ++ Q +L +K+Q + + I P I PN Y +T+
Sbjct: 33 LQQQVVNLQTQLEILKQQATQSMMAIDSPSIENPNYYQDTK 73
>At1g15780.1 68414.m01893 expressed protein
Length = 1335
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 166 KHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQMQRLPTQ---- 221
K ++ QQM L+QQ + RQ+++Q L AR Q + A ++ M L ++
Sbjct: 831 KQQQDQQMQLKQQFQQRQMQQQQLQARQQQQQQQLQARQQAAQLQQMNDMNDLTSRQGMN 890
Query: 222 VSYDRPAQRSISGYSQTQP 240
VS Q S+ G P
Sbjct: 891 VSRGMFQQHSMQGQRANYP 909
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/38 (31%), Positives = 26/38 (68%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARL 193
Q Q+++Q Q++ + QQ+ RQQ++ +Q++ + A+L
Sbjct: 837 QMQLKQQFQQRQMQQQQLQARQQQQQQQLQARQQAAQL 874
>At5g62090.2 68418.m07793 expressed protein
Length = 816
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 163 LQRKHEELQQMILRQQEELRQ-VKEQLLLARLGILQPLINVPNPYANTEETQQ-MQRLPT 220
LQR + QQ + +QQ+ +Q ++Q L + G+ L P PY N+ ++ MQ L
Sbjct: 243 LQRVQLQQQQQVQQQQQLQQQHQQQQQQLQQQGMQMQLTGGPRPYENSVCARRLMQYLYH 302
Query: 221 QVSYDRPAQRSI 232
Q RP++ SI
Sbjct: 303 Q--RQRPSESSI 312
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 155 DQAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQ 214
D Q Q+Q Q++ + Q IL QQ++LRQ ++Q L + L PL V ++ QQ
Sbjct: 204 DILQQQQQQQQQGQNPQFQILLQQQKLRQ-QQQYLQS----LPPLQRV--QLQQQQQVQQ 256
Query: 215 MQRLPTQ 221
Q+L Q
Sbjct: 257 QQQLQQQ 263
>At5g62090.1 68418.m07792 expressed protein
Length = 816
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 163 LQRKHEELQQMILRQQEELRQ-VKEQLLLARLGILQPLINVPNPYANTEETQQ-MQRLPT 220
LQR + QQ + +QQ+ +Q ++Q L + G+ L P PY N+ ++ MQ L
Sbjct: 243 LQRVQLQQQQQVQQQQQLQQQHQQQQQQLQQQGMQMQLTGGPRPYENSVCARRLMQYLYH 302
Query: 221 QVSYDRPAQRSI 232
Q RP++ SI
Sbjct: 303 Q--RQRPSESSI 312
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 155 DQAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQ 214
D Q Q+Q Q++ + Q IL QQ++LRQ ++Q L + L PL V ++ QQ
Sbjct: 204 DILQQQQQQQQQGQNPQFQILLQQQKLRQ-QQQYLQS----LPPLQRV--QLQQQQQVQQ 256
Query: 215 MQRLPTQ 221
Q+L Q
Sbjct: 257 QQQLQQQ 263
>At4g04790.1 68417.m00701 pentatricopeptide (PPR)
repeat-containing protein contains Pfam profile
PF01535: PPR repeat
Length = 713
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 15 ESTKASCNADIAKNAKQESAEPDNVSEADASHGTIKDAPSEENNLMVMSPSY 66
ES+ AS N DIA ++ A D +S ++S T D S E NL + PS+
Sbjct: 24 ESSIASGNKDIAGTSQ---AVKDLLSSKNSSSVTTSDKSSLEKNLFLKIPSF 72
>At5g55580.1 68418.m06929 mitochondrial transcription termination
factor family protein / mTERF family protein weak
similarity to mtDBP protein [Paracentrotus lividus]
GI:4584695; contains Pfam profile PF02536: mTERF
Length = 496
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 166 KHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPN 204
KH ++++M+LRQ + L+ E L A + L L +PN
Sbjct: 232 KHRDIKRMLLRQPQILQYTVENNLKAHISFLMGL-GIPN 269
>At1g72390.1 68414.m08373 expressed protein
Length = 1088
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 157 AQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARL-GILQPLINVPNPYANTEETQQM 215
+Q +QL + ++ QQ+ +Q + Q ++Q + L +L P V +P A + Q
Sbjct: 950 SQPSQQLAQSPQQQQQLQQHEQPQQAQQQQQATASPLQSVLSPP-QVGSPSAGITQQQLQ 1008
Query: 216 QRLPTQVSYDRP 227
Q P Q+S P
Sbjct: 1009 QSSPQQMSQRTP 1020
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/32 (31%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQ 187
Q+++++Q+ + +E ++++L+++EEL+Q KE+
Sbjct: 501 QSELKQQIDKVKQE-EELLLKEREELKQDKER 531
>At2g37080.1 68415.m04550 myosin heavy chain-related low similarity
to myosin heavy chain [Rana catesbeiana] GI:4249701
Length = 583
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 158 QIQEQLQRKHEELQQMILRQQEELRQVKEQL 188
+IQ++ K EL I + QEEL++ KEQL
Sbjct: 67 EIQKKRTGKTPELASQISQLQEELKKAKEQL 97
>At5g27000.1 68418.m03221 kinesin motor protein-related
non-consensus AT donor splice site at exon 12;
non-consensus AC acceptor splice site at exon 13
Length = 987
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/40 (27%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 159 IQEQLQR---KHEELQQMILRQQEELRQVKEQLLLARLGI 195
++++ QR +H E Q+++L QQ+ ++++K+ L + G+
Sbjct: 307 VEKKFQRTNFEHHEEQKILLNQQKHIQELKQTLYTTKAGM 346
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQM 215
+A+ Q+ Q +H ++ Q +QQ++ Q+ +QLLL R Q + + ++ QQ
Sbjct: 85 KAREQQLQQSQHPQVSQQQQQQQQQQIQM-QQLLLQRAQQQQQQQQQQHHHHQQQQQQQQ 143
Query: 216 QRLPTQVSYDRPAQRSISGYSQTQ 239
Q+ Q + Q Q Q
Sbjct: 144 QQQQQQQQQQQQHQNQPPSQQQQQ 167
>At3g17820.1 68416.m02272 glutamine synthetase (GS1) identical to
glutamine synthetase, cytosolic isozyme (glutamate--
ammonia ligase, GS1) [Arabidopsis thaliana]
SWISS-PROT:Q9LVI8
Length = 354
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 50 KDAPSEENNLMVMSPSYMSDASDAFTNSYHRTSQL-AHGGVANVNEHPCYG 99
KD + NN++VM +Y TN H +++ +H VA E P YG
Sbjct: 79 KDPFRKGNNILVMCDAYTPAGDPIPTNKRHNAAKIFSHPDVA--KEEPWYG 127
>At2g35630.1 68415.m04369 microtubule organization 1 protein (MOR1)
identical to microtubule organization 1 protein
GI:14317953 from [Arabidopsis thaliana]
Length = 1978
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 26 AKNAKQESAEPDNVSEADASHGTIKDAPSEE 56
AK ++ +E D EA+AS + D PSEE
Sbjct: 232 AKPTRKIRSEQDKEPEAEASSDVVGDGPSEE 262
>At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 160 QEQLQRKHEELQQMILRQQEELRQVKEQLLLARL------GILQPLINVPNPYANTEET 212
Q++L + +L+ + + QEELR +KEQL A L PNP A EE+
Sbjct: 60 QKKLGGRISDLESQLGQAQEELRLLKEQLANAEAVKKQAQDELHKKSKKPNPLARVEES 118
>At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 160 QEQLQRKHEELQQMILRQQEELRQVKEQLLLARL------GILQPLINVPNPYANTEET 212
Q++L + +L+ + + QEELR +KEQL A L PNP A EE+
Sbjct: 60 QKKLGGRISDLESQLGQAQEELRLLKEQLANAEAVKKQAQDELHKKSKKPNPLARVEES 118
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.310 0.125 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,193,273
Number of Sequences: 28952
Number of extensions: 193823
Number of successful extensions: 819
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 748
Number of HSP's gapped (non-prelim): 70
length of query: 271
length of database: 12,070,560
effective HSP length: 80
effective length of query: 191
effective length of database: 9,754,400
effective search space: 1863090400
effective search space used: 1863090400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 59 (27.9 bits)
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