Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000498-TA|BGIBMGA000498-PA|undefined
(271 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 33 0.033
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 30 0.41
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 29 0.71
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 29 0.71
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 29 0.94
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 28 1.2
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 28 1.2
SPAC1F3.04c |||DUF367 family protein|Schizosaccharomyces pombe|c... 28 1.6
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 1.6
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 28 1.6
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 2.9
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 27 2.9
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 27 3.8
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 27 3.8
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 26 5.0
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 5.0
SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificit... 26 6.6
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 26 6.6
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 26 6.6
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 25 8.7
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 25 8.7
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 8.7
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 33.5 bits (73), Expect = 0.033
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 15 ESTKASCNADIAKNAKQESAEPDNVSEADASHGT-IKDAPSEENNLMVMSPSYMSDASDA 73
ES S + DIA + S P + SEA S T I PS ++ S SY+ + S
Sbjct: 226 ESAYTSSSVDIAASTTASSTLPVSTSEATVSFSTDIPATPSTLSSPASSSSSYLVETSST 285
Query: 74 FTNSYHRT 81
T+S T
Sbjct: 286 LTDSVFTT 293
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 29.9 bits (64), Expect = 0.41
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 14 NESTKASCNADIAKNAKQESAEPDNVSEADASHGTIKDAPSEE 56
N ST +S NA AK S VS+ DA+ T KDA + +
Sbjct: 745 NASTSSSLNAAPNTTAKSSSQTAPPVSKGDATEKTEKDASANQ 787
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 29.1 bits (62), Expect = 0.71
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 158 QIQEQLQRKHEELQQMILRQQEELRQVK-EQLLLARLGILQPLINVPNPYANTEETQQMQ 216
Q E L+RKHE Q +I +Q +L ++ L+ L + L+N+ +P+ + +E Q+
Sbjct: 325 QCLEALRRKHEGKQHIIPFRQSKLTELLFHSGHLSGLAGINMLVNI-DPFGSFDENAQVM 383
Query: 217 R 217
R
Sbjct: 384 R 384
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 29.1 bits (62), Expect = 0.71
Identities = 18/85 (21%), Positives = 40/85 (47%)
Query: 158 QIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQMQR 217
Q E ++RK LQQ ++ Q++ + ++Q A+ + + P T + Q++
Sbjct: 291 QFIENVRRKRAILQQRQMQMQQQQKAQQQQSPKAQQPPAHLVQSAPVQRKTTPKIQRLPP 350
Query: 218 LPTQVSYDRPAQRSISGYSQTQPPP 242
Q+ +P Q+ + + ++ PP
Sbjct: 351 SSIQIPPPKPMQKFPANAASSESPP 375
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 28.7 bits (61), Expect = 0.94
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQM 215
Q Q Q+Q Q++ ++ QQ +QQ++ +Q ++Q A PNP N Q +
Sbjct: 257 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQAPQNAF-----FPNPQGNV-GAQSL 310
Query: 216 QRLPTQVSYDRPAQRSISGYSQTQPP 241
Q + Q D+P+ + PP
Sbjct: 311 QSMSPQ---DQPSTQQQQPQRTAAPP 333
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 189 LLARLGILQPLINVPNPYANTE-ETQQMQRLPTQVSYDRPAQRSISGYS 236
LL+R+ +L+ +N + ++ E QQ LP+ S D QR+I S
Sbjct: 78 LLSRVSMLEKRLNEVGTKSQSDYENQQSHNLPSTPSADAETQRNIGSLS 126
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 4 ELQKPLTCDLNESTKASCNADIAKNAKQESAEPDNV 39
E Q+PL D N + N+D +ES+E DNV
Sbjct: 376 EAQQPLGVDGNSGLQLFSNSDAIDTVDRESSEIDNV 411
>SPAC1F3.04c |||DUF367 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 156 QAQIQEQLQRKHEE-LQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQ 214
Q + +Q K ++ L++M QE+ Q + + A +P +N + ++N+EE++
Sbjct: 176 QCHDAQDIQEKEKKYLEEMEASYQEQRNQTTDDIWSAGNLNHKPTLNTSSTHSNSEESRS 235
Query: 215 MQRLPTQVS 223
P++ S
Sbjct: 236 PLHEPSEAS 244
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 57 NNLMVMSPSYMSDASDAFT--NSYHRTSQLAHGGVANVNEHPCYGSMMFPQSYKAGSE 112
N+L SP+ S +D+ + NS S G + +++P +FP SY + +E
Sbjct: 377 NHLHSPSPNSNSGPTDSLSAPNSTSSPSMAHANGASFASQYPSLNKSIFPASYSSSAE 434
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 27.9 bits (59), Expect = 1.6
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 22 NADIAKNAKQESAEPDNVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNSYHRT 81
N D + ++ E + S+ T +P+ + V+SPS MSD S A +++Y
Sbjct: 5 NLDRLRLKSRQGFETSVSKPSTPSYSTYSLSPTFSDK-SVLSPSTMSD-SYALSSTYTAG 62
Query: 82 SQLAHGGVANVNEHPCYGSMMFPQSYKAGSEP 113
S +G E +GS+ P S K+ + P
Sbjct: 63 SSYQNG------ESDYFGSLPTPSSDKSSTSP 88
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Query: 155 DQAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLL 190
++ ++QEQ +RK E Q+ LR++EE ++++++ +L
Sbjct: 133 ERIRLQEQQRRKEERDQK--LREKEEAQRLRQEQIL 166
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 69 DASDAFTNSYHRTSQLAHGGVANVN 93
DAS N+YH TS L H V+N +
Sbjct: 47 DASFVAQNAYHTTSVLKHHNVSNTS 71
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 35 EPDNVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNS 77
E +N+S S D SE N++ PS+ +D+ + F NS
Sbjct: 405 ERNNLSAEGTSASPSLDKKSESTNIVQPIPSHPNDSLNPFYNS 447
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 26.6 bits (56), Expect = 3.8
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 155 DQAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQ 214
++A++ QL+ K E+ L ++E+ Q K Q L R P + N++ET
Sbjct: 151 ERAEVDLQLRLKREK---DALFEEEQTLQNKIQDELQRRSYETPQSSSKKK-TNSKETTS 206
Query: 215 MQRLPTQVSYD 225
++ LPT + +D
Sbjct: 207 LETLPTSIYFD 217
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 26.2 bits (55), Expect = 5.0
Identities = 8/33 (24%), Positives = 24/33 (72%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQL 188
Q I Q +RK +++++++ +Q+EE ++++ ++
Sbjct: 11 QTTIPTQQKRKSKKMEELLSKQREECKELQSKI 43
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 104 PQSYKAGSEPA--LVPQHGIGAQYLEPDPYVS 133
PQS A + P+ P HG+G++ L DP S
Sbjct: 2 PQSQVATASPSQNAQPNHGMGSKVLSSDPNAS 33
>SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificity
factor complex subunit Rna14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 733
Score = 25.8 bits (54), Expect = 6.6
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Query: 37 DNVSEADASHGTIKDAP--SEENNLMVMSPSYMSDASDAFTNSYHR---TSQLAHGGVAN 91
DNV EADAS IKD+P E+ N ++ S + S ++ R + L
Sbjct: 5 DNV-EADASSNIIKDSPKIKEQENTSTVNESDVLATSTTASSGVKRKRLPNDLVGQLRDK 63
Query: 92 VNEHPCYGSMMFPQSYKAGSEPALVPQHGIGAQYLEPDPYV 132
+ E+P S + + GS+ Q L P PYV
Sbjct: 64 IQENPNDISSWYALVEEYGSKGKHEELRETYEQMLRPFPYV 104
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 197 QPLINVPNPYANTEETQQMQRLP 219
QP +PY N +TQQ+ LP
Sbjct: 436 QPAYGSSSPYVNGHQTQQISSLP 458
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 22 NADIAKNAKQ-ESAEPDNVSEADASHGTIKDAPSEE 56
N++I + K+ E A P+N D SH +++ P E+
Sbjct: 11 NSEIERIIKEAEDAGPENALTLDLSHLNLRELPYEQ 46
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 25.4 bits (53), Expect = 8.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 65 SYMSDASDAFTNSYH-RTSQLAHGGVANVNEHPCYGSMMFPQSYKAGSEPALVPQH 119
S++SD SDAFT S R ++ A + + + + G EPA VPQ+
Sbjct: 166 SFLSDVSDAFTESLRGRINEAEKEIDARLEVINSFEEEILGLWSELGVEPADVPQY 221
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 25.4 bits (53), Expect = 8.7
Identities = 8/32 (25%), Positives = 19/32 (59%)
Query: 158 QIQEQLQRKHEELQQMILRQQEELRQVKEQLL 189
Q++++ KH E++ + ++EEL+ + L
Sbjct: 12 QLRQRFPSKHSEIEDEVANEKEELKDATKSAL 43
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.4 bits (53), Expect = 8.7
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 33 SAEPDNVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNSYHRTSQLAHGGVANV 92
S P +S S+ +D +E+N+++ +SP+ S S H+T + N+
Sbjct: 200 SLSPTKLSFLSTSNIDPEDL-TEDNSILPVSPTRDSTKS-------HKTLNFSPSRKNNL 251
Query: 93 NEHPCYGSMMFPQSYKAGSEPALVPQ 118
N P S+ S + S+P PQ
Sbjct: 252 NARPLTMSLYTNTSEEKDSQPTRAPQ 277
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.125 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,025,245
Number of Sequences: 5004
Number of extensions: 39137
Number of successful extensions: 169
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 137
Number of HSP's gapped (non-prelim): 31
length of query: 271
length of database: 2,362,478
effective HSP length: 72
effective length of query: 199
effective length of database: 2,002,190
effective search space: 398435810
effective search space used: 398435810
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 53 (25.4 bits)
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