Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000498-TA|BGIBMGA000498-PA|undefined
(271 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0635 - 23847255-23847287,23847397-23848083,23848178-238485... 34 0.11
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 33 0.32
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 31 0.99
01_06_1409 - 37111954-37112061,37112295-37112330,37112434-371124... 31 0.99
06_03_1298 + 29141578-29141623,29142129-29142250,29143818-291438... 31 1.3
01_07_0016 - 40476014-40476333,40476598-40476740,40476945-404790... 30 1.7
12_02_1089 - 25987384-25987611,25988255-25988419,25988607-259886... 30 2.3
02_04_0344 - 22171401-22171448,22171725-22171760,22171996-221720... 29 3.0
07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,203... 29 4.0
12_02_0019 - 12366259-12366819,12367653-12367685,12368294-123683... 28 7.0
10_07_0061 + 12489552-12489674,12490761-12490836,12490916-124909... 28 7.0
07_01_0463 + 3502708-3503535 28 7.0
03_06_0341 - 33261210-33261327,33261411-33262057,33262950-332630... 28 7.0
08_02_0239 - 14680013-14680291,14680560-14680649,14680654-146810... 28 9.2
03_05_1147 - 30744180-30744350,30744439-30744924 28 9.2
03_02_0406 + 8182870-8184262,8184376-8184452,8184809-8184920,818... 28 9.2
>01_05_0635 -
23847255-23847287,23847397-23848083,23848178-23848540,
23848633-23848725,23848820-23848870,23849031-23849304,
23849766-23850595
Length = 776
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 155 DQAQIQEQLQRKHEELQQMILRQQEELRQVKEQLL 189
DQA++ +LQ+++ EL+Q + RQQ++L V+ Q L
Sbjct: 555 DQAKLVLELQKENSELRQQLARQQQKLLTVQAQTL 589
>08_02_0499 - 17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 32.7 bits (71), Expect = 0.32
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQL--LLARLGILQP---LINVPNPYANTE 210
Q+++ +Q Q ++ QQM L QQ+++ Q ++QL L + +LQ L +P N
Sbjct: 1036 QSELVQQQQVYFQQQQQMYLMQQQQMYQQQQQLQQQLLQQQLLQQQQYLSQMPQQQQNMT 1095
Query: 211 ETQQMQRLPTQVSYDRPAQRSISGYSQTQ 239
+ QQ+ + Q + + Q+ + Q Q
Sbjct: 1096 QQQQLFQQQQQQLFQQQQQQMVVLQQQQQ 1124
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 31.1 bits (67), Expect = 0.99
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQ----VKEQLLLARLGILQPLINVPNPYANTEE 211
Q Q+Q+Q ++H +LQ L Q++ Q ++Q+ + Q I ++
Sbjct: 691 QQQLQQQQLQQHMQLQTQGLPLQQQQSQGHPLQQQQMQQMQQQQQQQQIQQMQQQQQMQQ 750
Query: 212 TQQMQRLPTQVSYDRPAQRSISGYSQTQP 240
QQ Q+ P Q+ + Q +G Q QP
Sbjct: 751 MQQQQQQPQQLQQQQQPQMVGTGMGQQQP 779
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 155 DQAQIQEQLQRKHE-----ELQQM-ILRQQEELRQVKEQLLLARLGI-LQPLINVPNPYA 207
+Q Q Q QL ++H+ +LQQ L+QQ + +Q+++ + L G+ LQ + +P
Sbjct: 664 NQLQQQNQLHQQHQLQPQNQLQQQHQLQQQLQQQQLQQHMQLQTQGLPLQQQQSQGHPLQ 723
Query: 208 NTEETQQMQRLPTQVSYDRPAQRSISGYSQTQPPP 242
+ Q Q+ Q Q+ + Q Q P
Sbjct: 724 QQQMQQMQQQQQQQQIQQMQQQQQMQQMQQQQQQP 758
>01_06_1409 -
37111954-37112061,37112295-37112330,37112434-37112498,
37112610-37112688,37112967-37113041,37113623-37114147
Length = 295
Score = 31.1 bits (67), Expect = 0.99
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 158 QIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQMQR 217
Q Q+Q Q++ ++LQQ +QQ++L+Q ++Q Q N P + + R
Sbjct: 53 QQQQQQQQQQQKLQQQQQQQQQKLQQQQQQQQQKLQQQQQQQQNQPQHSSQQSQQTTTLR 112
Query: 218 LPTQVSYDRPAQRSISGYSQTQPP 241
Q+S + A+ +S + P
Sbjct: 113 NQQQISQQQTARTPVSMAQKLDSP 136
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/32 (37%), Positives = 25/32 (78%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQ 187
Q ++Q+Q Q++ ++LQQ +QQ++L+Q ++Q
Sbjct: 62 QQKLQQQQQQQQQKLQQQQQQQQQKLQQQQQQ 93
>06_03_1298 +
29141578-29141623,29142129-29142250,29143818-29143874,
29143983-29144138,29144220-29144304,29144575-29144665,
29144807-29144971,29145064-29145186,29145334-29145409,
29145513-29145642,29145951-29147824,29148339-29148529,
29148697-29148860,29149164-29149275,29149276-29149294
Length = 1136
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARL-GILQPLINVPNPYANTEETQQ 214
Q Q Q+Q Q++ ++ QQ +L+QQ++ +++Q L+++ L L N + T++ Q
Sbjct: 545 QQQQQQQQQQQQQQQQQKLLQQQQQQLLLQQQQQLSKMPAQLSSLAN--QQFQLTDQQLQ 602
Query: 215 MQRL 218
+Q L
Sbjct: 603 LQLL 606
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 160 QEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQMQRLP 219
Q+Q Q++ ++ QQ +QQ+ L+Q ++QLLL + L + + AN + Q+L
Sbjct: 543 QQQQQQQQQQQQQQQQQQQKLLQQQQQQLLLQQQQQLSKMPAQLSSLANQQFQLTDQQLQ 602
Query: 220 TQV 222
Q+
Sbjct: 603 LQL 605
>01_07_0016 -
40476014-40476333,40476598-40476740,40476945-40479099,
40479205-40480047,40480176-40480269,40480356-40481207,
40481367-40481437,40481750-40481821,40481977-40482019
Length = 1530
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/38 (36%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARL 193
Q Q Q QLQ++ + QQ++ +QQ++ +Q ++QL+L ++
Sbjct: 879 QEQHQRQLQQR--QAQQLLQQQQQQQQQQQQQLILEQM 914
>12_02_1089 -
25987384-25987611,25988255-25988419,25988607-25988678,
25989275-25989435,25989941-25989968
Length = 217
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
Query: 27 KNAKQESAEPDNVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNSYHRTSQLAH 86
+ +Q EP++ EA + S +++ MV +PS +D T H A
Sbjct: 17 RQKQQRQGEPEDQQEASVT--------STDSHTMVATPS-----TDYATPYAHHDMAHAM 63
Query: 87 GGVANVNEHPCYGSMMFPQSYKAGSEPALVPQHGIG 122
G +A N P YGS+ + P LV H G
Sbjct: 64 GQIAYANIDPYYGSLYAAYGGQPMMHPPLVGMHPAG 99
>02_04_0344 -
22171401-22171448,22171725-22171760,22171996-22172056,
22173246-22173304,22173384-22173497,22173575-22173646,
22173786-22173836,22173935-22174057,22175154-22175291
Length = 233
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 158 QIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLIN------VPNPYAN--- 208
+IQ++L++ +EE +L +++ +++ + L R ++Q + + + +P +
Sbjct: 39 EIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRSDVIQTIPDFWLTAFLSHPLLSELL 98
Query: 209 TEETQQMQRLPTQVSYDRPAQRSISGYSQT 238
TEE Q+M + V D ++ SGYS T
Sbjct: 99 TEEDQKMFKYLESVDVD-DSKDVKSGYSIT 127
>07_01_0276 +
2028983-2029070,2030084-2030151,2030317-2031246,
2031334-2031415,2031544-2031609,2032606-2033304,
2033422-2035424,2035599-2036173,2037060-2037223,
2037306-2037365,2037475-2037839
Length = 1699
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEEL------RQVKEQLLLARLGILQPLINVPNPYANT 209
Q Q+Q+Q+Q++ + QQM +Q++ L +Q ++QLLL + +L +I +
Sbjct: 872 QQQMQQQMQQQQQMQQQMQQQQKQRLQLLQLEQQQQQQLLLQQQHLLSQVIPHGHSSQQP 931
Query: 210 EETQQMQR--LPT 220
++ QR LPT
Sbjct: 932 DDLYGSQRTSLPT 944
>12_02_0019 -
12366259-12366819,12367653-12367685,12368294-12368363,
12368582-12368712,12369627-12369673,12369803-12369879,
12369963-12370027,12370105-12370191,12370300-12370389,
12370972-12371037,12371608-12371664,12371749-12371850,
12373018-12373554
Length = 640
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 30 KQESAEPDNVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNS 77
K +A D SEAD+S GT+ + + + S +D D F++S
Sbjct: 480 KPAAASTDQKSEADSSTGTVAKGNNASSAEVSNKESARNDKDDVFSDS 527
>10_07_0061 + 12489552-12489674,12490761-12490836,12490916-12490980,
12491089-12491166,12492156-12492236,12492813-12492974,
12493328-12493426,12493509-12494797,12495063-12495286,
12495373-12495500,12495596-12495634,12495724-12497178
Length = 1272
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/32 (34%), Positives = 23/32 (71%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQ 187
Q Q+Q+ Q++ ++ QQ I +QQ++ +Q ++Q
Sbjct: 1133 QQQLQQLQQQQQQQQQQQIQQQQQQQQQQQQQ 1164
>07_01_0463 + 3502708-3503535
Length = 275
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/34 (32%), Positives = 25/34 (73%)
Query: 155 DQAQIQEQLQRKHEELQQMILRQQEELRQVKEQL 188
D A+++ +L++ ++Q + ++++ LRQ+KEQL
Sbjct: 184 DPAKLKAKLEKIDTKIQDLQAKKEDILRQLKEQL 217
>03_06_0341 -
33261210-33261327,33261411-33262057,33262950-33263061,
33263313-33264097,33264797-33264867,33266323-33266635
Length = 681
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 156 QAQIQEQLQRKHEELQQ-MILRQQEELRQVKEQL 188
Q Q Q+Q Q++H++ QQ L+QQ + +Q +QL
Sbjct: 540 QQQQQQQFQQQHQQQQQSQQLQQQHQQQQQPQQL 573
>08_02_0239 -
14680013-14680291,14680560-14680649,14680654-14681047,
14682052-14682137,14683327-14683465,14683470-14683585
Length = 367
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 72 DAFTNSY-HRTSQLAHGGVANVNEHPCYGSMMFPQSYKAGSEPALVP 117
+A N Y H+ + H A++ + C F Q Y+ G EPA +P
Sbjct: 153 NATVNRYFHKVLNVVHAMAADIIK--CVDPNNFAQHYRLGQEPACLP 197
>03_05_1147 - 30744180-30744350,30744439-30744924
Length = 218
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 161 EQLQRKHEELQQMILRQQEELRQVKEQLL 189
EQ + E L+ + LRQ+EE+R +K+ +L
Sbjct: 157 EQKDTEVERLKDLCLRQREEIRTLKDAVL 185
>03_02_0406 +
8182870-8184262,8184376-8184452,8184809-8184920,
8185064-8185071,8185633-8186217
Length = 724
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 25 IAKNAKQESAEPDNVSEADASHGTIKDAPSEENNLMVMSPSYMSD 69
+A NA +E+AE VSE SH T+ + E + MS S S+
Sbjct: 373 VAMNALKEAAE--KVSEVKRSHPTMSQSKHEVMQMETMSASQCSN 415
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.310 0.125 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,528,414
Number of Sequences: 37544
Number of extensions: 241789
Number of successful extensions: 899
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 814
Number of HSP's gapped (non-prelim): 69
length of query: 271
length of database: 14,793,348
effective HSP length: 81
effective length of query: 190
effective length of database: 11,752,284
effective search space: 2232933960
effective search space used: 2232933960
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 59 (27.9 bits)
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