BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000498-TA|BGIBMGA000498-PA|undefined
(271 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 31 0.011
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 28 0.10
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 28 0.10
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 28 0.10
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 28 0.10
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 28 0.10
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 28 0.10
AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex det... 28 0.10
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 28 0.10
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 25 0.72
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 25 0.72
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 0.72
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 25 0.72
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 25 0.72
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 25 0.72
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 0.72
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 25 0.72
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 24 1.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.8
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 21 8.9
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 8.9
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 8.9
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 21 8.9
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 31.1 bits (67), Expect = 0.011
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 157 AQIQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQMQ 216
A +Q+Q Q++ ++ QQ +QQ++ +Q ++ R G+ + +N+ QM
Sbjct: 1206 AMVQQQQQQQQQQQQQQ--QQQQQQQQQQQHQAREREGVGAGIAETSAGTSNSRGAAQMS 1263
Query: 217 RLPTQVS 223
++P VS
Sbjct: 1264 KVPRDVS 1270
Score = 27.5 bits (58), Expect = 0.13
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQ 187
QAQ Q Q Q++ ++ QQ +QQ++ +Q ++Q
Sbjct: 823 QAQAQAQPQQQQQQQQQQPQQQQQQQQQQQQQ 854
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQ 187
QAQ Q Q Q++ ++ Q +QQ++ +Q +++
Sbjct: 825 QAQAQPQQQQQQQQQQPQQQQQQQQQQQQQQR 856
Score = 23.0 bits (47), Expect = 2.9
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 172 QMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEETQQMQRLPTQVSY 224
Q +QQ + +Q ++Q + QP P P ++ QQ Q Q Y
Sbjct: 1498 QKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEY 1550
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQ 187
Q Q Q+Q Q++ ++ Q +QQ + +Q ++Q
Sbjct: 1506 QQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQ 1537
Score = 21.4 bits (43), Expect = 8.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQEELRQVKEQ 187
Q Q Q+Q Q+ ++ Q +QQ++ +Q +Q
Sbjct: 1514 QQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQ 1545
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.9 bits (59), Expect = 0.10
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 159 IQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEET 212
IQ++ +R+HE L++ ++ + ELR+ +E+ L R P + +NT +T
Sbjct: 44 IQQEREREHERLKKKMILEY-ELRRAREKKLSKRSKSRSPESRGRSNASNTSKT 96
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.9 bits (59), Expect = 0.10
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 159 IQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEET 212
IQ++ +R+HE L++ ++ + ELR+ +E+ L R P + +NT +T
Sbjct: 44 IQQEREREHERLKKKMILEY-ELRRAREKKLSKRSKSRSPESRGRSNASNTSKT 96
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.9 bits (59), Expect = 0.10
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 159 IQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEET 212
IQ++ +R+HE L++ ++ + ELR+ +E+ L R P + +NT +T
Sbjct: 44 IQQEREREHERLKKKMILEY-ELRRAREKKLSKRSKSRSPESRGRSNASNTSKT 96
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.9 bits (59), Expect = 0.10
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 159 IQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEET 212
IQ++ +R+HE L++ ++ + ELR+ +E+ L R P + +NT +T
Sbjct: 44 IQQEREREHERLKKKMILEY-ELRRAREKKLSKRSKSRSPESRGRSNASNTSKT 96
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.9 bits (59), Expect = 0.10
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 159 IQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEET 212
IQ++ +R+HE L++ ++ + ELR+ +E+ L R P + +NT +T
Sbjct: 44 IQQEREREHERLKKKMILEY-ELRRAREKKLSKRSKSRSPESRGRSNASNTSKT 96
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.9 bits (59), Expect = 0.10
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 159 IQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEET 212
IQ++ +R+HE L++ ++ + ELR+ +E+ L R P + +NT +T
Sbjct: 44 IQQEREREHERLKKKMILEY-ELRRAREKKLSKRSKSRSPESRGRSNASNTSKT 96
>AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 27.9 bits (59), Expect = 0.10
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 159 IQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEET 212
IQ++ +R+HE L++ ++ + ELR+ +E+ L R P + +NT +T
Sbjct: 44 IQQEREREHERLKKKMILEY-ELRRAREKKLSKRSKSRSPESRGRSNASNTSKT 96
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.9 bits (59), Expect = 0.10
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 159 IQEQLQRKHEELQQMILRQQEELRQVKEQLLLARLGILQPLINVPNPYANTEET 212
IQ++ +R+HE L++ ++ + ELR+ +E+ L R P + +NT +T
Sbjct: 44 IQQEREREHERLKKKMILEY-ELRRAREKKLSKRSKSRSPESRGRSNASNTSKT 96
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 25.0 bits (52), Expect = 0.72
Identities = 13/29 (44%), Positives = 23/29 (79%), Gaps = 3/29 (10%)
Query: 159 IQEQLQRKHEEL-QQMILRQQEELRQVKE 186
IQ++ +R+HE L ++MIL + ELR+++E
Sbjct: 45 IQQEREREHERLMKKMIL--EYELRRIRE 71
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.72
Identities = 13/29 (44%), Positives = 23/29 (79%), Gaps = 3/29 (10%)
Query: 159 IQEQLQRKHEEL-QQMILRQQEELRQVKE 186
IQ++ +R+HE L ++MIL + ELR+++E
Sbjct: 45 IQQEREREHERLMKKMIL--EYELRRIRE 71
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 25.0 bits (52), Expect = 0.72
Identities = 13/29 (44%), Positives = 23/29 (79%), Gaps = 3/29 (10%)
Query: 159 IQEQLQRKHEEL-QQMILRQQEELRQVKE 186
IQ++ +R+HE L ++MIL + ELR+++E
Sbjct: 45 IQQEREREHERLMKKMIL--EYELRRIRE 71
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.72
Identities = 13/29 (44%), Positives = 23/29 (79%), Gaps = 3/29 (10%)
Query: 159 IQEQLQRKHEEL-QQMILRQQEELRQVKE 186
IQ++ +R+HE L ++MIL + ELR+++E
Sbjct: 45 IQQEREREHERLMKKMIL--EYELRRIRE 71
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.72
Identities = 13/29 (44%), Positives = 23/29 (79%), Gaps = 3/29 (10%)
Query: 159 IQEQLQRKHEEL-QQMILRQQEELRQVKE 186
IQ++ +R+HE L ++MIL + ELR+++E
Sbjct: 45 IQQEREREHERLMKKMIL--EYELRRIRE 71
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.72
Identities = 13/29 (44%), Positives = 23/29 (79%), Gaps = 3/29 (10%)
Query: 159 IQEQLQRKHEEL-QQMILRQQEELRQVKE 186
IQ++ +R+HE L ++MIL + ELR+++E
Sbjct: 45 IQQEREREHERLMKKMIL--EYELRRIRE 71
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.72
Identities = 13/29 (44%), Positives = 23/29 (79%), Gaps = 3/29 (10%)
Query: 159 IQEQLQRKHEEL-QQMILRQQEELRQVKE 186
IQ++ +R+HE L ++MIL + ELR+++E
Sbjct: 45 IQQEREREHERLMKKMIL--EYELRRIRE 71
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 25.0 bits (52), Expect = 0.72
Identities = 13/29 (44%), Positives = 23/29 (79%), Gaps = 3/29 (10%)
Query: 159 IQEQLQRKHEEL-QQMILRQQEELRQVKE 186
IQ++ +R+HE L ++MIL + ELR+++E
Sbjct: 45 IQQEREREHERLMKKMIL--EYELRRIRE 71
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 161 EQLQRKHEELQQMILRQQEELRQVKEQL 188
E+ +RKH ++ + R+Q LR+ EQL
Sbjct: 101 EERERKHAVHKEQLSREQRFLRRRLEQL 128
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 38 NVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNSYHRTSQLAHGG 88
N+ ++ +G +KD N L + A + F +Y + + H G
Sbjct: 47 NLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNG 97
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 38 NVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNSYHRTSQLAHGG 88
N+ ++ +G +KD N L + A + F +Y + + H G
Sbjct: 47 NLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDG 97
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 38 NVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNSYHRTSQLAHGG 88
N+ ++ +G +KD N L + A + F +Y + + H G
Sbjct: 47 NLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDG 97
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 38 NVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNSYHRTSQLAHGG 88
N+ ++ +G +KD N L + A + F +Y + + H G
Sbjct: 47 NLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDG 97
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 38 NVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNSYHRTSQLAHGG 88
N+ ++ +G +KD N L + A + F +Y + + H G
Sbjct: 47 NLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDG 97
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 38 NVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNSYHRTSQLAHGG 88
N+ ++ +G +KD N L + A + F +Y + + H G
Sbjct: 47 NLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDG 97
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 38 NVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNSYHRTSQLAHGG 88
N+ ++ +G +KD N L + A + F +Y + H G
Sbjct: 115 NLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNG 165
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 38 NVSEADASHGTIKDAPSEENNLMVMSPSYMSDASDAFTNSYHRTSQLAHGG 88
N+ ++ +G +KD N L + A + F +Y + H G
Sbjct: 115 NLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNG 165
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 21.4 bits (43), Expect = 8.9
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 99 GSMMFPQSYKAGSEPALVPQHGIGAQYLEPDP 130
GS + ++ ++ S VPQ G +PDP
Sbjct: 95 GSQLAMRNDRSPSYSMQVPQQGASIDDSDPDP 126
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 8.9
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 99 GSMMFPQSYKAGSEPALVPQHGIGAQYLEPDP 130
GS + ++ ++ S VPQ G +PDP
Sbjct: 543 GSQLAMRNDRSPSYSMQVPQQGASIDDSDPDP 574
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 8.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 156 QAQIQEQLQRKHEELQQMILRQQE 179
Q Q Q+Q Q++ ++ QQ +QQ+
Sbjct: 439 QPQQQQQQQQQQQQQQQQQQQQQQ 462
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.4 bits (43), Expect = 8.9
Identities = 9/33 (27%), Positives = 21/33 (63%)
Query: 155 DQAQIQEQLQRKHEELQQMILRQQEELRQVKEQ 187
+Q + +E+ QR+H + +QQ++ +Q ++Q
Sbjct: 70 EQMREREREQREHSDRVTSQQQQQQQQQQQQDQ 102
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.310 0.125 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,683
Number of Sequences: 429
Number of extensions: 2813
Number of successful extensions: 44
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of query: 271
length of database: 140,377
effective HSP length: 57
effective length of query: 214
effective length of database: 115,924
effective search space: 24807736
effective search space used: 24807736
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 43 (21.4 bits)
- SilkBase 1999-2023 -