Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000496-TA|BGIBMGA000496-PA|IPR000109|TGF-beta receptor,
type I/II extracellular region
(642 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 27 0.53
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 26 0.92
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 26 0.92
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 26 0.92
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 25 1.2
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 23 6.5
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 23 6.5
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 23 8.6
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 23 8.6
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 23 8.6
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 26.6 bits (56), Expect = 0.53
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 244 ADEKYDKSLIEDIKSLFRVLVLFIPLPVFWALFDQQGSRWTFQADRMEQDIGSWTLKADQ 303
ADE +D + ++ L++P +F + + + F + GSWT +Q
Sbjct: 96 ADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQ 155
Query: 304 MQ-VLN 308
+ VLN
Sbjct: 156 LDLVLN 161
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 25.8 bits (54), Expect = 0.92
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 244 ADEKYDKSLIEDIKSLFRVLVLFIPLPVFWALFDQQGSRWTFQADRMEQDIGSWTLKADQ 303
ADE +D + ++ L++P +F + + + F + GSWT +Q
Sbjct: 96 ADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQ 155
Query: 304 MQ-VLN 308
+ VLN
Sbjct: 156 LDLVLN 161
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 25.8 bits (54), Expect = 0.92
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 244 ADEKYDKSLIEDIKSLFRVLVLFIPLPVFWALFDQQGSRWTFQADRMEQDIGSWTLKADQ 303
ADE +D + ++ L++P +F + + + F + GSWT +Q
Sbjct: 96 ADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQ 155
Query: 304 MQ-VLN 308
+ VLN
Sbjct: 156 LDLVLN 161
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 25.8 bits (54), Expect = 0.92
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 244 ADEKYDKSLIEDIKSLFRVLVLFIPLPVFWALFDQQGSRWTFQADRMEQDIGSWTLKADQ 303
ADE +D + ++ L++P +F + + + F + GSWT +Q
Sbjct: 96 ADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQ 155
Query: 304 MQ-VLN 308
+ VLN
Sbjct: 156 LDLVLN 161
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 25.4 bits (53), Expect = 1.2
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 244 ADEKYDKSLIEDIKSLFRVLVLFIPLPVFWALFDQQGSRWTFQADRMEQDIGSWTLKADQ 303
ADE +D + ++ L++P +F + + + F + GSWT +Q
Sbjct: 96 ADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 155
Query: 304 MQ-VLN 308
+ VLN
Sbjct: 156 LDLVLN 161
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 23.0 bits (47), Expect = 6.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 5 PYPKAVAFIVTNEFCERFS 23
PY +A+ I NE CE +S
Sbjct: 291 PYTRAMGVIGYNEVCELYS 309
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 23.0 bits (47), Expect = 6.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 5 PYPKAVAFIVTNEFCERFS 23
PY +A+ I NE CE +S
Sbjct: 291 PYTRAMGVIGYNEVCELYS 309
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 22.6 bits (46), Expect = 8.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 357 NNIHTIGPLSVYEHLD 372
NNIH + P +Y HL+
Sbjct: 234 NNIHGMAPSVMYPHLN 249
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 22.6 bits (46), Expect = 8.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 357 NNIHTIGPLSVYEHLD 372
NNIH + P +Y HL+
Sbjct: 182 NNIHGMAPSVMYPHLN 197
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 22.6 bits (46), Expect = 8.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 357 NNIHTIGPLSVYEHLD 372
NNIH + P +Y HL+
Sbjct: 365 NNIHGMAPSVMYPHLN 380
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.323 0.140 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,117
Number of Sequences: 317
Number of extensions: 7089
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 13
length of query: 642
length of database: 114,650
effective HSP length: 61
effective length of query: 581
effective length of database: 95,313
effective search space: 55376853
effective search space used: 55376853
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)
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