Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000496-TA|BGIBMGA000496-PA|IPR000109|TGF-beta receptor,
type I/II extracellular region
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40184| Best HMM Match : PTR2 (HMM E-Value=0) 220 2e-57
SB_21872| Best HMM Match : No HMM Matches (HMM E-Value=.) 143 3e-34
SB_1733| Best HMM Match : ATP-synt_C (HMM E-Value=4.5) 110 4e-24
SB_56680| Best HMM Match : PTR2 (HMM E-Value=3e-06) 105 1e-22
SB_15813| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 3e-11
SB_25052| Best HMM Match : Prenyltrans (HMM E-Value=6.5) 51 2e-06
SB_14765| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 6e-06
SB_15812| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 7e-05
SB_37034| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.076
SB_49457| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.40
SB_5552| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.53
SB_29473| Best HMM Match : CASP_C (HMM E-Value=6.5) 33 0.71
SB_16510| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.0
SB_6822| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.0
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
SB_11387| Best HMM Match : MFS_1 (HMM E-Value=4.4e-06) 29 8.7
>SB_40184| Best HMM Match : PTR2 (HMM E-Value=0)
Length = 421
Score = 220 bits (538), Expect = 2e-57
Identities = 109/215 (50%), Positives = 151/215 (70%), Gaps = 7/215 (3%)
Query: 83 LVYATGSVLISLTAMPPIGLPQFELTILALLLIAFGTGGIKPCVSAFGGDQFKLPEQAKY 142
++YA G++++++T++P I L ++ LLLIA GTGGIKPCVSAFGGDQF ++
Sbjct: 1 MIYAFGNIVVAITSIPAI-LAKYWCHD-GLLLIAIGTGGIKPCVSAFGGDQFSAAQE-NL 57
Query: 143 LGYYFSLFYFAINAGSLISTFLTPILRADVHCFGDSDCFSLAFGVPGILMVVSILIFVAG 202
L +FS+FYFAIN GSL+S +TPILR DV+ G + + LAFGVP ILM+ S+ +F G
Sbjct: 58 LQSFFSIFYFAINLGSLLSMIVTPILRGDVNGLG-TIAYPLAFGVPAILMITSVGLFWCG 116
Query: 203 RRLYVIKNPSGNVLGKVSTCVGHAVVKSIKNKQ---KRDHWLDHADEKYDKSLIEDIKSL 259
R+ Y P GNV+ +V+ VG A+ +NK K+DHW+D A+ Y +I DIK+L
Sbjct: 117 RKKYKKIPPEGNVVLQVTCAVGCAIKNRFRNKDPSVKKDHWMDWAENDYGAKMISDIKAL 176
Query: 260 FRVLVLFIPLPVFWALFDQQGSRWTFQADRMEQDI 294
F+VL +F+P+PVFW LFDQQGSRWT QA+ M+ D+
Sbjct: 177 FKVLFMFLPMPVFWTLFDQQGSRWTLQAEEMDGDL 211
>SB_21872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 143 bits (347), Expect = 3e-34
Identities = 100/305 (32%), Positives = 152/305 (49%), Gaps = 30/305 (9%)
Query: 13 IVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVFTMFAYFFPVLGAMIADGWL 72
I+ E CER ++YG+ L + D LGF + + +F YF PV G +AD ++
Sbjct: 49 ILLTELCERLTFYGITANLVPFCEDSLGFKRPMPSTVNLLFQGTCYFIPVFGGWLADTFM 108
Query: 73 GRFRTIFYLSLVYATGSVLISLTAMPP------IGLPQFELT--------ILALLLIAFG 118
GR+ I+ LVY G+VL + A G L+ I+AL++IAFG
Sbjct: 109 GRYNVIYGSCLVYFFGTVLFAAGACTTGDILNIFGKQTKYLSSSLRKASSIVALVVIAFG 168
Query: 119 TGGIKPCVSAFGGDQFKLPEQAKYLGYYFSLFYFAINAGSLISTFLTPILRADVHCFGDS 178
TGGIK VS FG DQ + + + + +F+ FY+ IN GS +S L ++
Sbjct: 169 TGGIKANVSPFGADQVQ-GKGPRAVQKFFNWFYWFINIGSFLSFTLIVWVQ-------QK 220
Query: 179 DCFSLAFGVPGILMVVSILIFVAGRRLYVIKNPSGNVLGKVSTCVGHAVVK---SIKNKQ 235
F + V I M++ ++F+ GR YV++ P G+VL V A+ + S KN Q
Sbjct: 221 YTFFYGYAVTAISMMIGTVVFMTGRNWYVVRPPGGSVLTDTYRVVKLAIKRHWSSDKNLQ 280
Query: 236 KRD-HWLDHADEKYDKSL----IEDIKSLFRVLVLFIPLPVFWALFDQQGSRWTFQADRM 290
HWLD A E Y + +E++KSL R+L +F ++W L+ Q + + QA+ M
Sbjct: 281 SEGIHWLDRAKESYGGAFSYHRVENVKSLIRLLPVFAMFIIYWTLYSQMQTSYLIQAEYM 340
Query: 291 EQDIG 295
D G
Sbjct: 341 MLDYG 345
Score = 64.5 bits (150), Expect = 2e-10
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 518 NSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVAFGNLIVVLI 577
+ + I + +PQ++++ EV S+TGLEF+++QAP ++ ++ ++L+T GN + +
Sbjct: 432 SDMSIFYQVPQFMLIGTSEVFTSITGLEFAYSQAPRCLQGLVMGIFLVTSGLGNYLASAL 491
Query: 578 VE-GNFLDAQW-----------KEFFLFAGLMLLDMFIFTAMAFRYKYVDHKSSTEEDIA 625
+D W FFL A LM+ + I+ +A RYKYV ++ + D+
Sbjct: 492 TNIVTSVDKSWYPTDPNTGHLENYFFLLAILMVANFIIYILVAMRYKYVAPQTE-KGDVR 550
Query: 626 VEEIKMPE 633
+E PE
Sbjct: 551 TQEKAPPE 558
>SB_1733| Best HMM Match : ATP-synt_C (HMM E-Value=4.5)
Length = 168
Score = 110 bits (264), Expect = 4e-24
Identities = 62/119 (52%), Positives = 78/119 (65%), Gaps = 3/119 (2%)
Query: 526 IPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDA 585
IPQYVV+T EVMFSVTGL F+++QAP SMKSVLQS WLLTVAFG+LIVV++ +
Sbjct: 44 IPQYVVITAAEVMFSVTGLGFAYSQAPNSMKSVLQSFWLLTVAFGDLIVVILSSAKPVKG 103
Query: 586 QWKEFFLFAGLMLLDMFIFTAMAFRYKYVDHKSSTEEDIAVEEIKMPEK--PTIQQKDN 642
KE FL+ GLM + IF M++ Y YV K EED EE + E + ++DN
Sbjct: 104 VEKEMFLYGGLMGVICIIFGIMSYFYTYVTPK-DFEEDADEEEKTLGEANGMVLDERDN 161
>SB_56680| Best HMM Match : PTR2 (HMM E-Value=3e-06)
Length = 606
Score = 105 bits (251), Expect = 1e-22
Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 32/325 (9%)
Query: 10 VAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVFTMFAYFFPVLGAMIAD 69
+A ++ E CERF+YYG+ L+L D G++ A V+T A+F LG ++AD
Sbjct: 58 IACLILAEVCERFAYYGITINFVLFL-DNFGWSMFAAAGGVLVYTSVAWFMCALGGLLAD 116
Query: 70 GWLGRFRTIFYLSLVYATGSVLISLTAM----------PPIGLPQFELTILALLLIAFGT 119
G GR TI LVY GSVL+ L A+ +P +L +L +A G
Sbjct: 117 GRFGRHSTIISGLLVYYIGSVLLVLLAVWLDYRHKEPSDQDSIPILPWLVLIMLSVAAGE 176
Query: 120 GGIKPCVSAFGGDQFK-LPEQAKYLGYYFSLFYFAINAGSLISTFLTPILRADVH-CFGD 177
G +K +SAF +QF+ + G + L++F+ +T I + D+ +G
Sbjct: 177 GAVKSNLSAFSAEQFQGESPSGSWKGIFTCLYWFSNVIALFGLAAVTYIQQTDLSWTYG- 235
Query: 178 SDCFSLAFGVPGILMVVSILIFVAGRRLYVIKNPSGNVLGKVSTCVGHAVVK-------- 229
++L FG+P + + ++ F+ + +VI P G L V + A K
Sbjct: 236 ---YTLGFGIPLVSLTITAAAFLCSSKHFVINRPRGTGLRNVRMIIKQAWSKRNDTVETR 292
Query: 230 ---SIKNKQKRDHWLDHADEKYDKSLIE----DIKSLFRVLVLFIPLPVFWALFDQQGSR 282
S+ + + WLD A +Y + + ++KSL + + L +W ++ Q +
Sbjct: 293 EFTSLHKAKSKMTWLDRASVQYGGTFLNSEVCEVKSLGKAFAFSLCLIPYWMIYSQLYTT 352
Query: 283 WTFQADRMEQDIGSWTLKADQMQVL 307
+ Q + D G + A M +L
Sbjct: 353 YILQGLHLHADFGVLVVPAAWMSLL 377
Score = 48.0 bits (109), Expect = 2e-05
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 521 HILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVAFGNLI 573
+ILW +PQY ++ M EV S+TGLE ++ P++ +SV +++ + + G+++
Sbjct: 457 NILWQMPQYALLGMSEVFASMTGLEIVYSLCPSTPQSVTSAIYNIMICIGSIL 509
>SB_15813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 67.7 bits (158), Expect = 3e-11
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 28/234 (11%)
Query: 13 IVTNEFCERFSYYGMRTILSLYLRDKLGFT-----------DNDATVIYHVFTMFAYFFP 61
I+ ER +YYG+ + L ++L ++ F N V +T A+F
Sbjct: 61 IILAVLLERTTYYGILSNLVVFLTTEMDFAFGSLGVGNSTISNGIIVSVFAYTGMAWFMS 120
Query: 62 VLGAMIADGWLGRFRTIFYLSLVYATGS----VLISLTAMPPIGLPQFE-----LTILAL 112
+G I D + G + I+ L+Y GS ++ L L ++ LTI L
Sbjct: 121 TVGGFIGDSYSGHYNAIYGSLLIYILGSGSLFMITVLLKYSSSSLNDYKELSVGLTIGTL 180
Query: 113 LLIAFGTGGIKPCVSAFGGDQFKLPEQAKYLGYYFSLFYFAINAGSLISTFLTPILRADV 172
L+++ G G K +SAFG +Q + +K +F+ +Y+AIN S ++ L ++ +
Sbjct: 181 LVLSIGEGTYKANISAFGAEQLS-SDDSKTYRQFFNWYYWAINVASFLAYMLLAYIQVN- 238
Query: 173 HCFGDSDCFSLAFGVPGILMVVSILIFVAGRRLYVIKNPSGNVLGKVSTCVGHA 226
+G F + + ++++ ++F + Y IK SGN+L KV + A
Sbjct: 239 --WG----FFYGYLISLCCILLACVLFCIPQSHYNIKPASGNILKKVCGVIREA 286
>SB_25052| Best HMM Match : Prenyltrans (HMM E-Value=6.5)
Length = 242
Score = 51.2 bits (117), Expect = 2e-06
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 16 NEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVFTMFAYFFPVLGAMIADGWLGRF 75
+E FS + +L LYL L F + IYH F+M +YF V+GAM+AD +LG++
Sbjct: 140 HENISAFSGFVFVAVLVLYLTKDLMFNKDKGKAIYHAFSMVSYFTGVIGAMMADSFLGKY 199
Query: 76 R 76
+
Sbjct: 200 K 200
>SB_14765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 30
Score = 50.0 bits (114), Expect = 6e-06
Identities = 19/28 (67%), Positives = 25/28 (89%)
Query: 252 LIEDIKSLFRVLVLFIPLPVFWALFDQQ 279
+I DIK+LF+VL +F+P+PVFW LFDQQ
Sbjct: 3 MISDIKALFKVLFMFLPMPVFWTLFDQQ 30
>SB_15812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 46.4 bits (105), Expect = 7e-05
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 520 IHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVAFGNLI 573
+ I++ IPQY ++ + EV SV GLEF++ +AP SM+S + ++ + G+L+
Sbjct: 34 LSIMYQIPQYGLIGVSEVFASVGGLEFAYREAPPSMQSFVMGLFFFVQSIGSLL 87
>SB_37034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 36.3 bits (80), Expect = 0.076
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 589 EFFLFAGLMLLDMFIFTAMAFRYKYVDHKSSTEEDIAVEE 628
EFF FAGL+ + M IF M++ YKY + S D+ E+
Sbjct: 3 EFFFFAGLLAVVMLIFMFMSYYYKYASY--SANGDVKTED 40
>SB_49457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 33.9 bits (74), Expect = 0.40
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 519 SIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLT-VAFGNLIVVLI 577
S H L L V M G++ L + P + + SV +LT V GNL+V I
Sbjct: 608 SDHWLQLSTLMVTMVNGQIAML---LRLPVDEVPPEIDREVDSVGVLTLVLMGNLLVAFI 664
Query: 578 VEGNFLDAQWKEFFLFAGLMLLDMFIFTAMAFRYKYVDHKSSTEEDIAVEE 628
G+ L A W +L FI Y++ D +S+ ED + E
Sbjct: 665 AAGSLLYAVWP--------LLKKAFISLCRNRGYEFSDRQSNDSEDETLVE 707
>SB_5552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 28
Score = 33.5 bits (73), Expect = 0.53
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 199 FVAGRRLYVIKNPSGNVLGKVSTCVG 224
F+ G++LY IK P+GNVL +V +G
Sbjct: 3 FIGGKKLYTIKKPAGNVLIQVFKVIG 28
>SB_29473| Best HMM Match : CASP_C (HMM E-Value=6.5)
Length = 389
Score = 33.1 bits (72), Expect = 0.71
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 386 RGEGNCSNIVYNGNFYLKENTANSFFINREGISNFTDNNDKAIN--GVSVRFLSNVQTSV 443
R +G+ SN+ NGN Y+ E T + + + I + + A G+ + +S+++TS+
Sbjct: 146 RKDGHHSNVDKNGNAYMYEKTRSKIKMKTK-IKRRKERSGNAATDIGMQMDHVSSIETSI 204
Query: 444 TVAIVESKKNKTKLSLQSDDISQVKITKGNG 474
+ A ++N +S + +++ NG
Sbjct: 205 SFASYVKRRNPNFYQFRSKEKNKLAAGMENG 235
>SB_16510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 30.3 bits (65), Expect = 5.0
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 525 LIPQYVVMTMGEVMFSVTGLEFSFTQAPASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLD 584
LIP ++ ++ V GL F+ T P + ++ V+ VA G V+L+V GN +
Sbjct: 122 LIPYSEIVLFASII--VGGLFFNGT-TPLMFELAMECVY--PVAEGITAVLLLVAGNVIY 176
Query: 585 AQWKEFFLFAGLMLLDMFIFTAMA 608
++ F+F G+ + M FT +A
Sbjct: 177 LAFQVAFMFPGVSVKWMNWFTVVA 200
>SB_6822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 30.3 bits (65), Expect = 5.0
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 401 YLKENTANSFFINREGISNFTDNNDKAINGVSVRFLSN--VQTSVTVAIVESKKNKTKLS 458
Y K+ S + ++ + KA+ ++ R LS+ + +S ES+K+ K
Sbjct: 567 YAKKARHASPIQGKSKAASLGEEKAKAMLSLAYRRLSSPRIFSSAADEPHESRKDTLKPG 626
Query: 459 LQSDDISQVKITKGNG 474
L SDDI+ K+ GNG
Sbjct: 627 LDSDDIAVTKVKVGNG 642
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 29.5 bits (63), Expect = 8.7
Identities = 22/89 (24%), Positives = 36/89 (40%)
Query: 344 NFTINTGDFNANNNNIHTIGPLSVYEHLDINADGSIELPYYVRGEGNCSNIVYNGNFYLK 403
N +IN + + NNNN I S + + + + + N +N N N
Sbjct: 1780 NSSINNNNSSINNNNSSIINNNSSINNNNSSINNNNSSIINNNSSNNNNNSSINNNNSSI 1839
Query: 404 ENTANSFFINREGISNFTDNNDKAINGVS 432
N +S N I+N + N+ +IN S
Sbjct: 1840 INNNSSIINNNSSINNRNNTNNNSINNRS 1868
>SB_11387| Best HMM Match : MFS_1 (HMM E-Value=4.4e-06)
Length = 815
Score = 29.5 bits (63), Expect = 8.7
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 590 FFLFAGLMLLDMFIFTAMAFRYKYVDHKSSTE-EDIAVEEIKMPEK 634
F++FAG+MLL + +F A+ F + Y D + + ++ AV +I + K
Sbjct: 347 FYIFAGVMLLAL-LFAAVLFEFTYEDDGNDGKVDECAVWKILLQPK 391
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.323 0.140 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,612,643
Number of Sequences: 59808
Number of extensions: 836679
Number of successful extensions: 1968
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1936
Number of HSP's gapped (non-prelim): 24
length of query: 642
length of database: 16,821,457
effective HSP length: 87
effective length of query: 555
effective length of database: 11,618,161
effective search space: 6448079355
effective search space used: 6448079355
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 63 (29.5 bits)
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