Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000496-TA|BGIBMGA000496-PA|IPR000109|TGF-beta receptor,
type I/II extracellular region
(642 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical pr... 289 4e-78
AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity... 289 4e-78
U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide tr... 288 7e-78
AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity ... 288 7e-78
AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide ... 286 3e-77
AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopepti... 284 1e-76
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 36 0.067
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 36 0.067
Z68227-5|CAA92510.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.62
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z99283-1|CAB16536.2| 414|Caenorhabditis elegans Hypothetical pr... 31 2.5
Z82287-2|CAB05312.1| 502|Caenorhabditis elegans Hypothetical pr... 30 5.8
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 30 5.8
AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical ... 30 5.8
>Z70306-2|CAA94323.2| 785|Caenorhabditis elegans Hypothetical
protein C06G8.2 protein.
Length = 785
Score = 289 bits (709), Expect = 4e-78
Identities = 145/322 (45%), Positives = 210/322 (65%), Gaps = 21/322 (6%)
Query: 6 YPKAVAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVFTMFAYFFPVLGA 65
+PK IV NE CERFS+YGMR +L+LY + L F+ + +TV++H FT+ Y P+LG+
Sbjct: 30 WPKQTFLIVGNELCERFSFYGMRAVLTLYFFNILNFSQSFSTVLFHAFTVICYSSPLLGS 89
Query: 66 MIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPIGLPQFE-LTILALLLIAFGTGGIKP 124
++ADG++G+F TIF++S+ YA G +L++ +++ P G L +L LL++ GTGGIKP
Sbjct: 90 ILADGYIGKFWTIFFISIFYACGQILLAFSSIAPSGSSHHPLLDLLGLLIVGLGTGGIKP 149
Query: 125 CVSAFGGDQFKLPEQAKYLGYYFSLFYFAINAGSLISTFLTPILRADVHCFGDSDCFSLA 184
CVSAFGGDQF + + +FS+FYF+INAGSLIS +LTP R+ + CFG C+ LA
Sbjct: 150 CVSAFGGDQFP-AHYTRMISLFFSMFYFSINAGSLISMWLTPYFRS-MSCFGHDSCYPLA 207
Query: 185 FGVPGILMVVSILIFVAGRRLYVIKNPSGNVLGKVSTCVGHAVVK--SIKNKQKRDHWLD 242
FG+P ILM+V+ L+F+AG Y P N++ KV + A+ K S + +R HWL+
Sbjct: 208 FGIPAILMIVATLVFMAGSFWYKKVPPKENIIFKVIGTITTALRKKASSSSTHQRSHWLE 267
Query: 243 HADEKYDKSL----------------IEDIKSLFRVLVLFIPLPVFWALFDQQGSRWTFQ 286
++ + +D +L IEDIK LFRV+V+ IP+P+FWAL+DQQGS W Q
Sbjct: 268 YSLDGHDCALSTECKNLHGNCAQRRYIEDIKRLFRVIVMMIPVPMFWALYDQQGSTWVLQ 327
Query: 287 ADRMEQDIGSWTLKADQMQVLN 308
A M+ + + + DQM VLN
Sbjct: 328 AVGMDAKVFGFEILPDQMGVLN 349
Score = 113 bits (272), Expect = 4e-25
Identities = 56/142 (39%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 496 TINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASM 555
T++ D A + N + ILW IPQYV++T GEV+FS+TGLEF++T+A +
Sbjct: 644 TVSTRSKNDSEVLATTESLVSYNRVSILWQIPQYVILTAGEVLFSITGLEFAYTEASPQL 703
Query: 556 KSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMA-FRYKYV 614
KSV+Q++WL T A G+LIVV+I N + F+F G+ML +F+F +A F Y+Y
Sbjct: 704 KSVVQALWLFTTAIGDLIVVVIFMLNIFSDVAVQMFVFGGIMLFVIFVFILLAVFYYEYA 763
Query: 615 DHKSSTEEDIAVEEIKMPEKPT 636
D+ S E ++ E++ + + T
Sbjct: 764 DY--SNESEVLTEKMIVDDDHT 783
>AF000417-1|AAC39118.1| 785|Caenorhabditis elegans high-affinity
peptide transporter protein.
Length = 785
Score = 289 bits (709), Expect = 4e-78
Identities = 145/322 (45%), Positives = 210/322 (65%), Gaps = 21/322 (6%)
Query: 6 YPKAVAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVFTMFAYFFPVLGA 65
+PK IV NE CERFS+YGMR +L+LY + L F+ + +TV++H FT+ Y P+LG+
Sbjct: 30 WPKQTFLIVGNELCERFSFYGMRAVLTLYFFNILNFSQSFSTVLFHAFTVICYSSPLLGS 89
Query: 66 MIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPIGLPQFE-LTILALLLIAFGTGGIKP 124
++ADG++G+F TIF++S+ YA G +L++ +++ P G L +L LL++ GTGGIKP
Sbjct: 90 ILADGYIGKFWTIFFISIFYACGQILLAFSSIAPSGSSHHPLLDLLGLLIVGLGTGGIKP 149
Query: 125 CVSAFGGDQFKLPEQAKYLGYYFSLFYFAINAGSLISTFLTPILRADVHCFGDSDCFSLA 184
CVSAFGGDQF + + +FS+FYF+INAGSLIS +LTP R+ + CFG C+ LA
Sbjct: 150 CVSAFGGDQFP-AHYTRMISLFFSMFYFSINAGSLISMWLTPYFRS-MSCFGHDSCYPLA 207
Query: 185 FGVPGILMVVSILIFVAGRRLYVIKNPSGNVLGKVSTCVGHAVVK--SIKNKQKRDHWLD 242
FG+P ILM+V+ L+F+AG Y P N++ KV + A+ K S + +R HWL+
Sbjct: 208 FGIPAILMIVATLVFMAGSFWYKKVPPKENIIFKVIGTITTALRKKASSSSTHQRSHWLE 267
Query: 243 HADEKYDKSL----------------IEDIKSLFRVLVLFIPLPVFWALFDQQGSRWTFQ 286
++ + +D +L IEDIK LFRV+V+ IP+P+FWAL+DQQGS W Q
Sbjct: 268 YSLDGHDCALSTECKNLHGNCAQRRYIEDIKRLFRVIVMMIPVPMFWALYDQQGSTWVLQ 327
Query: 287 ADRMEQDIGSWTLKADQMQVLN 308
A M+ + + + DQM VLN
Sbjct: 328 AVGMDAKVFGFEILPDQMGVLN 349
Score = 113 bits (272), Expect = 4e-25
Identities = 56/142 (39%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 496 TINVYEDTDGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQAPASM 555
T++ D A + N + ILW IPQYV++T GEV+FS+TGLEF++T+A +
Sbjct: 644 TVSTRSKNDSEVLATTESLVSYNRVSILWQIPQYVILTAGEVLFSITGLEFAYTEASPQL 703
Query: 556 KSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMA-FRYKYV 614
KSV+Q++WL T A G+LIVV+I N + F+F G+ML +F+F +A F Y+Y
Sbjct: 704 KSVVQALWLFTTAIGDLIVVVIFMLNIFSDVAVQMFVFGGIMLFVIFVFILLAVFYYEYA 763
Query: 615 DHKSSTEEDIAVEEIKMPEKPT 636
D+ S E ++ E++ + + T
Sbjct: 764 DY--SNESEVLTEKMIVDDDHT 783
>U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide
transporter protein 2 protein.
Length = 835
Score = 288 bits (707), Expect = 7e-78
Identities = 151/328 (46%), Positives = 215/328 (65%), Gaps = 27/328 (8%)
Query: 6 YPKAVAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVFTMFAYFFPVLGA 65
+PK IV+NEFCERFSYYGMRT+L+ YL + L FTD+ +T+ ++ FT+ Y P+LG+
Sbjct: 44 WPKTTLCIVSNEFCERFSYYGMRTVLTFYLLNVLKFTDSQSTIFFNGFTVLCYTTPLLGS 103
Query: 66 MIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPIGLPQFE-LTILALLLIAFGTGGIKP 124
++ADG++G+F TIF +S++YA G V+++L + + + LL+IAFGTGGIKP
Sbjct: 104 IVADGYIGKFWTIFSVSILYAIGQVVLALASTKNFQSSVHPWMDLSGLLIIAFGTGGIKP 163
Query: 125 CVSAFGGDQFKLPEQAKYLGYYFSLFYFAINAGSLISTFLTPILRADVHCFGDSDCFSLA 184
CVSAFGGDQF+L Q + L +FS+FYF+INAGS+ISTF++PI R+ C G C+ +A
Sbjct: 164 CVSAFGGDQFEL-GQERMLSLFFSMFYFSINAGSMISTFISPIFRSQ-PCLGQDSCYPMA 221
Query: 185 FGVPGILMVVSILIFVAGRRLYVIKNPSGNVLGKVSTCVGHAVVKSIKN-KQKRDHWLDH 243
FG+P ILM+V+ L+F+ G Y P NV G+VS + AV +K+ ++HWL H
Sbjct: 222 FGIPAILMIVATLVFMGGSFWYKKNPPKDNVFGEVSRLMFRAVGNKMKSGSTPKEHWLLH 281
Query: 244 ----------------ADEKYDKSL------IEDIKSLFRVLVLFIPLPVFWALFDQQGS 281
EK +K+L I+D++SL RVLV+F+P+P+FWAL+DQQGS
Sbjct: 282 YLTTHDCALDAKCLELQAEKRNKNLCQKKKFIDDVRSLLRVLVMFLPVPMFWALYDQQGS 341
Query: 282 RWTFQADRMEQDIG-SWTLKADQMQVLN 308
W QA +M+ + + L DQMQ LN
Sbjct: 342 VWLIQAIQMDCRLSDTLLLLPDQMQTLN 369
Score = 99.1 bits (236), Expect = 8e-21
Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 9/138 (6%)
Query: 490 KSGAVYTINVYEDTDGAYQANPVI----ITPPNSIHILWLIPQYVVMTMGEVMFSVTGLE 545
K G V+ +Y T G Y+ NP I I NS+ ILW IPQ VV+T E++FS+TG E
Sbjct: 666 KQGGVF---IYALT-GTYE-NPKIHELQIVQSNSVSILWQIPQIVVITAAEILFSITGYE 720
Query: 546 FSFTQAPASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFT 605
F+++Q+ SMK+++Q++WLLT A G+ I+V+I N + EFF++A M + + IF
Sbjct: 721 FAYSQSAPSMKALVQALWLLTTAAGDSIIVVITILNLFENMAVEFFVYAAAMFVVIAIFA 780
Query: 606 AMAFRYKYVDHKSSTEED 623
++ Y ++ ++ EED
Sbjct: 781 LLSIFYYTYNYYTTDEED 798
>AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity
peptide transporter protein.
Length = 796
Score = 288 bits (707), Expect = 7e-78
Identities = 151/328 (46%), Positives = 215/328 (65%), Gaps = 27/328 (8%)
Query: 6 YPKAVAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVFTMFAYFFPVLGA 65
+PK IV+NEFCERFSYYGMRT+L+ YL + L FTD+ +T+ ++ FT+ Y P+LG+
Sbjct: 5 WPKTTLCIVSNEFCERFSYYGMRTVLTFYLLNVLKFTDSQSTIFFNGFTVLCYTTPLLGS 64
Query: 66 MIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPIGLPQFE-LTILALLLIAFGTGGIKP 124
++ADG++G+F TIF +S++YA G V+++L + + + LL+IAFGTGGIKP
Sbjct: 65 IVADGYIGKFWTIFSVSILYAIGQVVLALASTKNFQSSVHPWMDLSGLLIIAFGTGGIKP 124
Query: 125 CVSAFGGDQFKLPEQAKYLGYYFSLFYFAINAGSLISTFLTPILRADVHCFGDSDCFSLA 184
CVSAFGGDQF+L Q + L +FS+FYF+INAGS+ISTF++PI R+ C G C+ +A
Sbjct: 125 CVSAFGGDQFEL-GQERMLSLFFSMFYFSINAGSMISTFISPIFRSQ-PCLGQDSCYPMA 182
Query: 185 FGVPGILMVVSILIFVAGRRLYVIKNPSGNVLGKVSTCVGHAVVKSIKN-KQKRDHWLDH 243
FG+P ILM+V+ L+F+ G Y P NV G+VS + AV +K+ ++HWL H
Sbjct: 183 FGIPAILMIVATLVFMGGSFWYKKNPPKDNVFGEVSRLMFRAVGNKMKSGSTPKEHWLLH 242
Query: 244 ----------------ADEKYDKSL------IEDIKSLFRVLVLFIPLPVFWALFDQQGS 281
EK +K+L I+D++SL RVLV+F+P+P+FWAL+DQQGS
Sbjct: 243 YLTTHDCALDAKCLELQAEKRNKNLCQKKKFIDDVRSLLRVLVMFLPVPMFWALYDQQGS 302
Query: 282 RWTFQADRMEQDIG-SWTLKADQMQVLN 308
W QA +M+ + + L DQMQ LN
Sbjct: 303 VWLIQAIQMDCRLSDTLLLLPDQMQTLN 330
Score = 99.1 bits (236), Expect = 8e-21
Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 9/138 (6%)
Query: 490 KSGAVYTINVYEDTDGAYQANPVI----ITPPNSIHILWLIPQYVVMTMGEVMFSVTGLE 545
K G V+ +Y T G Y+ NP I I NS+ ILW IPQ VV+T E++FS+TG E
Sbjct: 627 KQGGVF---IYALT-GTYE-NPKIHELQIVQSNSVSILWQIPQIVVITAAEILFSITGYE 681
Query: 546 FSFTQAPASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFT 605
F+++Q+ SMK+++Q++WLLT A G+ I+V+I N + EFF++A M + + IF
Sbjct: 682 FAYSQSAPSMKALVQALWLLTTAAGDSIIVVITILNLFENMAVEFFVYAAAMFVVIAIFA 741
Query: 606 AMAFRYKYVDHKSSTEED 623
++ Y ++ ++ EED
Sbjct: 742 LLSIFYYTYNYYTTDEED 759
>AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide
transporter protein 3 protein.
Length = 701
Score = 286 bits (702), Expect = 3e-77
Identities = 139/308 (45%), Positives = 196/308 (63%), Gaps = 6/308 (1%)
Query: 6 YPKAVAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVFTMFAYFFPVLGA 65
YP AV F++ NEFCERFS+YGM+TIL +YL + F+ + AT IYH+FT AY P++G+
Sbjct: 13 YPPAVFFMLGNEFCERFSFYGMKTILFIYLITEHEFSPSKATFIYHLFTCIAYLTPLIGS 72
Query: 66 MIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPIGLP-QFELTILALLLIAFGTGGIKP 124
++AD GRF+ I Y S +Y G VL+SL A+P + P + L L +IAF TG IKP
Sbjct: 73 IMADSVFGRFKVILYGSSIYVVGHVLLSLGAVPFLSYPIRSSLDFSGLFVIAFATGCIKP 132
Query: 125 CVSAFGGDQFKLPEQAKYLGYYFSLFYFAINAGSLISTFLTPILRADVHCFGDSDCFSLA 184
CVSAF DQF +Q +FS FYFAIN GSL + +TPILR V CFG++ CF LA
Sbjct: 133 CVSAFAADQF-TEDQKDLRSQFFSFFYFAINGGSLFAIIITPILRGRVQCFGNAHCFPLA 191
Query: 185 FGVPGILMVVSILIFVAGRRLYVIKNPSGNVLGKVSTCVGHAVVKSIKNKQKRD----HW 240
FGVPG+LM++++++F+ G +Y PS +G V + ++ + RD HW
Sbjct: 192 FGVPGVLMLLALILFLMGWSMYKKHPPSKENVGSKVVAVIYTSLRKMVGGASRDKPVTHW 251
Query: 241 LDHADEKYDKSLIEDIKSLFRVLVLFIPLPVFWALFDQQGSRWTFQADRMEQDIGSWTLK 300
LDHA ++ + +I+ + L V V+F PL FWALFDQQGS W QA R++ +G +++
Sbjct: 252 LDHAAPEHSQKMIDSTRGLLNVAVIFCPLIFFWALFDQQGSTWVLQARRLDGRVGHFSIL 311
Query: 301 ADQMQVLN 308
+Q+ +N
Sbjct: 312 PEQIHAIN 319
Score = 112 bits (269), Expect = 8e-25
Identities = 55/138 (39%), Positives = 92/138 (66%), Gaps = 8/138 (5%)
Query: 492 GAVYTINVYEDT-DGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQ 550
GAV+ ++++ T +G + ++ PNS+ ILW +PQY+++T+GEV+ SVTGLEF+++Q
Sbjct: 548 GAVHVLHIHPSTTEGDFN----LLVRPNSVSILWSLPQYIIITLGEVLLSVTGLEFAYSQ 603
Query: 551 APASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMAFR 610
A +MKSVL ++WLLTV GNLI ++I + EFF ++ LM++ M +F +A +
Sbjct: 604 AAPNMKSVLTAMWLLTVFAGNLIDMMISGTRLIPHPALEFFFYSTLMVIVMGVFILLAMQ 663
Query: 611 YKYVDHKSSTEEDIAVEE 628
Y YV+ +++I + E
Sbjct: 664 YTYVE---DNDDEITITE 678
>AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopeptide
symporter OPT-3 protein.
Length = 701
Score = 284 bits (697), Expect = 1e-76
Identities = 139/308 (45%), Positives = 195/308 (63%), Gaps = 6/308 (1%)
Query: 6 YPKAVAFIVTNEFCERFSYYGMRTILSLYLRDKLGFTDNDATVIYHVFTMFAYFFPVLGA 65
YP AV F++ NEFCERFS+YGM+TIL +YL + F+ + AT IYH+FT AY P++G+
Sbjct: 13 YPPAVFFMLGNEFCERFSFYGMKTILFIYLITEHEFSPSKATFIYHLFTCIAYLTPLIGS 72
Query: 66 MIADGWLGRFRTIFYLSLVYATGSVLISLTAMPPIGLP-QFELTILALLLIAFGTGGIKP 124
++AD GRF+ I Y S +Y G VL+SL A+P + P + L L +IAF TG IKP
Sbjct: 73 IMADSVFGRFKVILYGSSIYVVGHVLLSLGAVPFLSYPIRSSLDFSGLFVIAFATGCIKP 132
Query: 125 CVSAFGGDQFKLPEQAKYLGYYFSLFYFAINAGSLISTFLTPILRADVHCFGDSDCFSLA 184
CVSAF DQF +Q +FS FYFAIN GSL + +TPILR V CFG++ CF LA
Sbjct: 133 CVSAFAADQF-TEDQKDLRSQFFSFFYFAINGGSLFAIIITPILRGRVQCFGNAHCFPLA 191
Query: 185 FGVPGILMVVSILIFVAGRRLYVIKNPSGNVLGKVSTCVGHAVVKSIKNKQKRD----HW 240
FGVPG+LM+++++ F+ G +Y PS +G V + ++ + RD HW
Sbjct: 192 FGVPGVLMLLALIQFLMGWSMYKKHPPSKENVGSKVVAVIYTSLRKMVGGASRDKPVTHW 251
Query: 241 LDHADEKYDKSLIEDIKSLFRVLVLFIPLPVFWALFDQQGSRWTFQADRMEQDIGSWTLK 300
LDHA ++ + +I+ + L V V+F PL FWALFDQQGS W QA R++ +G +++
Sbjct: 252 LDHAAPEHSQKMIDSTRGLLNVAVIFCPLIFFWALFDQQGSTWVLQARRLDGRVGHFSIL 311
Query: 301 ADQMQVLN 308
+Q+ +N
Sbjct: 312 PEQIHAIN 319
Score = 112 bits (269), Expect = 8e-25
Identities = 55/138 (39%), Positives = 92/138 (66%), Gaps = 8/138 (5%)
Query: 492 GAVYTINVYEDT-DGAYQANPVIITPPNSIHILWLIPQYVVMTMGEVMFSVTGLEFSFTQ 550
GAV+ ++++ T +G + ++ PNS+ ILW +PQY+++T+GEV+ SVTGLEF+++Q
Sbjct: 548 GAVHVLHIHPSTTEGDFN----LLVRPNSVSILWSLPQYIIITLGEVLLSVTGLEFAYSQ 603
Query: 551 APASMKSVLQSVWLLTVAFGNLIVVLIVEGNFLDAQWKEFFLFAGLMLLDMFIFTAMAFR 610
A +MKSVL ++WLLTV GNLI ++I + EFF ++ LM++ M +F +A +
Sbjct: 604 AAPNMKSVLTAMWLLTVFAGNLIDMMISGTRLIPHPALEFFFYSTLMVIVMGVFILLAMQ 663
Query: 611 YKYVDHKSSTEEDIAVEE 628
Y YV+ +++I + E
Sbjct: 664 YTYVE---DNDDEITITE 678
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 36.3 bits (80), Expect = 0.067
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 96 AMPPIGLPQFELTILALLLIAFGTGGIKPCVSA 128
A+PP+ LP+FEL L+L + G GG PC +A
Sbjct: 44 ALPPLQLPRFELPRLSLPSLGGGCGGPAPCAAA 76
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 36.3 bits (80), Expect = 0.067
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 96 AMPPIGLPQFELTILALLLIAFGTGGIKPCVSA 128
A+PP+ LP+FEL L+L + G GG PC +A
Sbjct: 44 ALPPLQLPRFELPRLSLPSLGGGCGGPAPCAAA 76
>Z68227-5|CAA92510.1| 330|Caenorhabditis elegans Hypothetical
protein F49C12.6 protein.
Length = 330
Score = 33.1 bits (72), Expect = 0.62
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 214 NVLGKVSTCVGHAV---VKSIKNKQKRDHW-LDHADEKYDKSLIEDIKSLFRVLVLFIPL 269
N+LG V+ CVG A+ +K I + + W L+ + K D +++++ R+L LF+ +
Sbjct: 125 NILGVVTVCVGGAIYAPIKHIPARVRPAPWSLEEDNYKDDPLVVKEVSCTRRILCLFLTI 184
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 32.3 bits (70), Expect = 1.1
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 404 ENTANSFFINR---EGISNFTDNNDKAINGVSVRFLSNVQTSVTVAIVESKKNKTKLSLQ 460
E ++N + + + +GIS+F D + ING R N+ V V+SKK +++
Sbjct: 229 EQSSNKYQVEQTVQDGISDFFDKQELCING--ERTNGNIGPEVVAVNVKSKKGVE--AVK 284
Query: 461 SDDISQVKITK 471
DDI+++K K
Sbjct: 285 QDDITKIKKIK 295
>Z99283-1|CAB16536.2| 414|Caenorhabditis elegans Hypothetical
protein Y70C5C.2 protein.
Length = 414
Score = 31.1 bits (67), Expect = 2.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 126 VSAFGGDQFKLPEQAKYLGYYFSLFYFAINAGSLISTF 163
V+ + GD K P AKY GYY F+ S++ TF
Sbjct: 355 VTLYDGDSTKSPVIAKYSGYYEWPFFNVSTGNSMLVTF 392
>Z82287-2|CAB05312.1| 502|Caenorhabditis elegans Hypothetical
protein ZK550.2 protein.
Length = 502
Score = 29.9 bits (64), Expect = 5.8
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 109 ILALLLIAFGTGGIKPCVSAFGGDQFKLPEQAKYLGYYFSLFYFAINAGSLISTFLTPI 167
++A ++ G G + + A+G ++ K + Y + F F I+ G IS F TP+
Sbjct: 136 LVARVVTGLGVGNLA-ALRAYGATASTPKDRLKAISYGTAGFVFGISFGPAISAFFTPL 193
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 29.9 bits (64), Expect = 5.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 491 SGAVYTINVYEDTDGAYQANPVIITPPNSIH 521
+GA Y + + DT A++ P+ + PP +H
Sbjct: 76 NGAPYPLRPHSDTRNAHRVYPIPVEPPQRVH 106
>AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical
protein Y43F8C.6 protein.
Length = 422
Score = 29.9 bits (64), Expect = 5.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 216 LGKVSTCVGHAVVKSIKNKQKRDHWLDHADE 246
L ++STCV + K IKN KR H + +++
Sbjct: 207 LDQISTCVANRTTKHIKNDIKRRHMMTSSED 237
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.140 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,784,648
Number of Sequences: 27539
Number of extensions: 679985
Number of successful extensions: 1495
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1451
Number of HSP's gapped (non-prelim): 25
length of query: 642
length of database: 12,573,161
effective HSP length: 86
effective length of query: 556
effective length of database: 10,204,807
effective search space: 5673872692
effective search space used: 5673872692
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 63 (29.5 bits)
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