Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000495-TA|BGIBMGA000495-PA|undefined
         (70 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    19   5.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    19   6.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.0 bits (37), Expect = 5.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 30  VKHQAIDEQINPFTKKTVYTQTYPTKLI 57
           V + ++DE  NP T   +Y      KL+
Sbjct: 337 VYYASLDETPNPVTNGKLYNFNTFAKLL 364


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
          protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 6.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)

Query: 54 TKLIPAAPRKACCFYCS 70
          T  I AA  K  C+Y S
Sbjct: 15 TTQIHAATDKVICYYAS 31


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.137    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,350
Number of Sequences: 317
Number of extensions: 560
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 70
length of database: 114,650
effective HSP length: 44
effective length of query: 26
effective length of database: 100,702
effective search space:  2618252
effective search space used:  2618252
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.2 bits)
S2: 35 (18.2 bits)