Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000495-TA|BGIBMGA000495-PA|undefined
         (70 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   0.82 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   1.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   5.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   5.8  

>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 0.82
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 19  KGDRFARINMEVKHQAI 35
           +G  F  +N E++HQA+
Sbjct: 91  RGQVFTMMNKEMRHQAV 107


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl
          cyclase beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 1.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query: 50 QTYPTKLIPAAPRKA 64
          Q YP  LIP   +KA
Sbjct: 40 QVYPENLIPRLAKKA 54


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.0 bits (37), Expect = 5.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)

Query: 39   INPFTKKTVYTQTY 52
            + P+TK T+  Q Y
Sbjct: 1077 LRPYTKYTLVVQAY 1090


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.0 bits (37), Expect = 5.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)

Query: 39   INPFTKKTVYTQTY 52
            + P+TK T+  Q Y
Sbjct: 1073 LRPYTKYTLVVQAY 1086


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.137    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,842
Number of Sequences: 429
Number of extensions: 621
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 70
length of database: 140,377
effective HSP length: 45
effective length of query: 25
effective length of database: 121,072
effective search space:  3026800
effective search space used:  3026800
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.7 bits)
S2: 36 (18.6 bits)