Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000495-TA|BGIBMGA000495-PA|undefined
(70 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 26 0.53
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 25 0.93
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 25 1.2
SPAC3F10.05c |mug113||DUF1766 family protein|Schizosaccharomyces... 24 2.8
SPAC1610.04 |mug99||meiotically upregulated gene Mug99|Schizosac... 24 2.8
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 23 4.9
SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein glycos... 23 4.9
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 23 6.5
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 22 8.6
SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr ... 22 8.6
SPAC15E1.05c |||ethanolamine-phosphate cytidylyltransferase |Sch... 22 8.6
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.2 bits (55), Expect = 0.53
Identities = 10/40 (25%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 1 MESNDFRPYFILIRKEEEKGDRFARINMEVKHQAIDEQIN 40
M+ +D YF+ +++ + +F+ ++ E+ Q +E+IN
Sbjct: 123 MDEHDTE-YFLKLKQAQPSLSKFSELDFEIVMQTFEEEIN 161
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 25.4 bits (53), Expect = 0.93
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 7 RPYFILIRKEEEKGDRFARINMEVKHQAIDEQINPFTKKTVYTQTYPTKLI 57
R YF++ + E + N++ K+ DE NP+ + +Y + P KL+
Sbjct: 140 RIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPY--QVLYDRLGPLKLM 188
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 25.0 bits (52), Expect = 1.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 11 ILIRKEEEKGDRFARINMEVKHQAIDEQINPFTKKTVYTQTYPTKL 56
I I+ +EE+ R A I E++ + E+ K YT+ + L
Sbjct: 356 ISIKAQEEERKRQAEIEKEIRQSRLQEEERKKKKLAKYTEVIISNL 401
>SPAC3F10.05c |mug113||DUF1766 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 326
Score = 23.8 bits (49), Expect = 2.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 41 PFTKKTVYTQTYPTKL 56
P T +TVY QTY T++
Sbjct: 91 PVTYETVYPQTYETQM 106
>SPAC1610.04 |mug99||meiotically upregulated gene
Mug99|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 23.8 bits (49), Expect = 2.8
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 34 AIDEQINPFTKKTVYTQTY 52
A+D+ + P +KT+YT +
Sbjct: 386 AVDQALQPLRRKTLYTTAF 404
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 23.0 bits (47), Expect = 4.9
Identities = 9/39 (23%), Positives = 22/39 (56%)
Query: 18 EKGDRFARINMEVKHQAIDEQINPFTKKTVYTQTYPTKL 56
++ DR + E + + I +QI P + +++ T+P ++
Sbjct: 276 DEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEV 314
>SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein
glycosyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 23.0 bits (47), Expect = 4.9
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 11 ILIRKEEEKGDRFARINMEVKHQAIDEQINPFTKKTVYTQ 50
+ I++EE+KG ++N V + + P +T+ Q
Sbjct: 74 VSIKEEEKKGTNPIKVNNNVYDIPLQPPVKPGESRTLLIQ 113
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 22.6 bits (46), Expect = 6.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 14 RKEEEKGDRFARINMEVKHQA 34
RK EE+G R A N E+K A
Sbjct: 699 RKAEEEGKREADKNPEIKSSA 719
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 22.2 bits (45), Expect = 8.6
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 26 INMEVKHQAIDEQINPFTKKTV 47
INME+ ++ ++P ++T+
Sbjct: 339 INMEISRAQFEKLVDPLVRRTI 360
>SPCC1450.03 |||ribonucleoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 240
Score = 22.2 bits (45), Expect = 8.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 36 DEQINPFTKKTVYTQTYPTKLIPAAPRK 63
DE ++ ++ V Q P ++P +PRK
Sbjct: 207 DEMLSEEEEQEVEKQILPKFVVPESPRK 234
>SPAC15E1.05c |||ethanolamine-phosphate cytidylyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 365
Score = 22.2 bits (45), Expect = 8.6
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 20 GDRFARINMEVKHQAIDEQINPFTKKTVYTQTYPTKLIPAAPRKACCF 67
G R+N E ID + FT+K + T++ P P A F
Sbjct: 192 GTTLLRLNPEKNIIYIDGDWDLFTEKHISALELCTRMFPGIPIMAGIF 239
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.323 0.137 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,686
Number of Sequences: 5004
Number of extensions: 11731
Number of successful extensions: 26
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 11
length of query: 70
length of database: 2,362,478
effective HSP length: 50
effective length of query: 20
effective length of database: 2,112,278
effective search space: 42245560
effective search space used: 42245560
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 45 (22.2 bits)
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