Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000494-TA|BGIBMGA000494-PA|undefined
(1054 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 36 0.039
SPBC1718.02 |hop1||linear element associated protein Hop1|Schizo... 34 0.091
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 32 0.37
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 32 0.48
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 32 0.48
SPBC3B9.10 |vti1||SNARE Vti1|Schizosaccharomyces pombe|chr 2|||M... 32 0.48
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 31 0.64
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 1.1
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 30 1.5
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 30 1.9
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 30 1.9
SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe... 30 1.9
SPBC1778.07 |||methyltransferase N2227 family|Schizosaccharomyce... 30 1.9
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 29 2.6
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 29 3.4
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 29 3.4
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 29 4.5
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 29 4.5
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 29 4.5
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 29 4.5
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 29 4.5
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 29 4.5
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 29 4.5
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 29 4.5
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 29 4.5
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 29 4.5
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 29 4.5
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 29 4.5
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 28 6.0
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 28 6.0
SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces po... 28 7.9
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 28 7.9
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 28 7.9
SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr... 28 7.9
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 35.5 bits (78), Expect = 0.039
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 28/266 (10%)
Query: 405 MCEQFQREFNFIDSFFESLQYLENCSLSNKCLSTNKVENLIKNPILYDSDFDIKATEYLE 464
+ E++ + + D + LQ LE + K ST+K NL++ + +++ D E
Sbjct: 611 LSERYNDKCHEFDELQKRLQTLEEENNKAKEDSTSKTSNLLEQLKMTEAEVDSLRKE--- 667
Query: 465 LLPKFENGTSLENGQTMATKSLCLL----NLLIRDEQRRARN-LLYVLKMREDALKDFTK 519
+ EN Q +A K L+ N L+ +EQ + N L LK +++ +
Sbjct: 668 ---------NEENKQVIALKESELVKSNDNKLLLNEQIESLNDQLSQLKTEMESVTTSKE 718
Query: 520 SQILWLENKKKHENTDVSTLKKKQR---GALLKLQHECGEMHRMRKALLTLSEKRKDALI 576
S +L N K+ N ++ +L KK R G L E+ +TL E D+L
Sbjct: 719 SLADYLSNLKERHNDELDSLNKKLREFEGILSSNSSLKSEIEERNNQYVTLRE-NFDSLQ 777
Query: 577 KTKKNIELKLKNNVDVEHLIEK-KKLK-RNGSDRNIVPLKCFDLSSSGCEETLTSRSTS- 633
K + V HL+++ +KLK N D++ + CE++L ++ S
Sbjct: 778 NAIMETFDKQVTHCSVNHLVQQIRKLKDENKKDQSGTDKLMKKIYH--CEQSLKEKTNSL 835
Query: 634 -EIAIRNTDIANVTSVSIKSAEKSIQ 658
+ ++ N+ +S +K+IQ
Sbjct: 836 ETLVSEKKELKNLLDAERRS-KKAIQ 860
Score = 34.3 bits (75), Expect = 0.091
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 694 LTLPQIFSNGKQYEVNEEAL---RNIVNSSNQNQLSGNEVVNNLMEQIQKGDIEMTSTPS 750
+T ++ S K+ E N++ + + + SN N+L NE + +L +Q+ + EM S +
Sbjct: 656 MTEAEVDSLRKENEENKQVIALKESELVKSNDNKLLLNEQIESLNDQLSQLKTEMESVTT 715
Query: 751 TARSLVEEFDQYYKSFVEEEIQLNRPEREYK 781
+ SL + + +E LN+ RE++
Sbjct: 716 SKESLADYLSNLKERHNDELDSLNKKLREFE 746
>SPBC1718.02 |hop1||linear element associated protein
Hop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 34.3 bits (75), Expect = 0.091
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
Query: 366 CRNEIKSLHYSHASDTYKLMKPSEIISSIKVNSLAQSDFMCEQFQREFNFIDSFFESLQ- 424
C++E K + + ++L K + + +N++ D M + EF I SF+ES
Sbjct: 159 CKDEEKVVQIITKMERFQLSKGEATKAGVFLNTVETKDCMSWLNRGEFKDIVSFYESNNG 218
Query: 425 -YLENCSLSNKCLSTNKVENLIKNPILYDSD--FDIKATEYLELLPKFENGTSLENGQTM 481
+ +CS + +ST K+ + K L+DS D + ++L+ L E G++ +
Sbjct: 219 IAISHCSHAFVPISTEKI-MINKESSLFDSQEKIDSQLEKFLQPLKYDEIGSTQILDEQS 277
Query: 482 ATKSL 486
KSL
Sbjct: 278 VEKSL 282
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 221 SMQSTDAQTELIKATFDSLEIPNVTLTKEHNKYQQSESLPNMKIPSMKTTSDQDDDSFVR 280
S Q D +L+ + D ++ L NK+ E LPN K+ + SD+ S
Sbjct: 485 SNQVADCMNKLLHTSLDGKKLSPSELC---NKFSDGEGLPNRKVSKLSVESDETAVS--A 539
Query: 281 KTGSYIISRATLTYTTKQKI 300
+G + + +TLT T + +
Sbjct: 540 SSGESVPTDSTLTDTKSKSV 559
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 31.9 bits (69), Expect = 0.48
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 529 KKHENTDVSTLKKKQRGALLKLQHECGEMHRMRKALLTLSEKRKDALIKTKKNIELKLKN 588
K+ +NTD S +KKQ + L + + LS + D + N E+K+KN
Sbjct: 84 KEKQNTD-SQKEKKQNKSKEALADAKDPLDESSNGIKNLSLNKNDEPA-FQTNGEVKMKN 141
Query: 589 NVDVEHLIEKKKLKR-NGSDRNIVP 612
+ + ++ EKKK+K+ N +D VP
Sbjct: 142 SSESDNQPEKKKIKKQNPTDLVSVP 166
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 31.9 bits (69), Expect = 0.48
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
Query: 661 DSILETLMTAPTDAAAENFVVVDGGYLNIIFHNLTLPQIFSNGKQYEVNEEALRNI--VN 718
D +LE + D E ++ I N + SN E RNI
Sbjct: 89 DWVLEQDLKIQKDLVKETHARLEQRLEEIRKRNQSRKNQMSNNSTTYHRETKRRNINAEA 148
Query: 719 SSNQNQLSGNEVVNNLMEQIQKGDIEMTSTPSTARSLVEEFDQYYKSFVEEEIQLNRPER 778
S++ N + N V+ + E + + M PST+ + F+ Y S V E ++ P+
Sbjct: 149 STSDNCNNSNTSVDPMDEYLVTAEYTM---PSTSEQSEDLFNNGYSSKVSELLRKLSPDN 205
Query: 779 EYKPPVVCEI 788
E KPP+V +I
Sbjct: 206 E-KPPIVQKI 214
>SPBC3B9.10 |vti1||SNARE Vti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 214
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 710 EEALRNIVNSSNQNQL-SGNEVVNNLMEQIQKGDIEMTSTPSTARSLVEEFDQYYKSFVE 768
EE L ++ S + + S ++N + E I + +IE+T P++ R LV + Y+S +E
Sbjct: 16 EEKLNDLSKSGENSVIQSCQRLLNEIDEVIGQMEIEITGIPTSERGLVNGRIRSYRSTLE 75
Query: 769 E 769
E
Sbjct: 76 E 76
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 711 EALRN-IVNSSNQNQLSGNEVVN--NLMEQIQKGDIEMTSTPSTARSLVEEFDQYYKSFV 767
EA+R + NS Q QLS + + N N +E +K E+ S + ++ DQ F
Sbjct: 678 EAIRKELENSKYQQQLSTDRLTNANNDVEAFKKEAKELRSINQNLQDIISRQDQRASKFA 737
Query: 768 EEEIQLN 774
EE + +N
Sbjct: 738 EELLHVN 744
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.7 bits (66), Expect = 1.1
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 704 KQYEVNEEALRNIVNSSNQNQLSG--------NEVVNNLMEQIQKGDIEMTSTPSTARSL 755
K +E E+ LR +NSS+ N+L ++ +NNL EQI++ ST S+ +SL
Sbjct: 458 KDFEKIEQDLRACLNSSS-NELKEKSALIDKKDQELNNLREQIKEQKKVSESTQSSLQSL 516
Query: 756 VEEFDQYYKSFVEEEIQLNRPEREYKPPVVCEIED-KYVQVSLPKLAPIEPRSYQSASTM 814
+ K E QLN E K + EI + +++ L LA + + A+
Sbjct: 517 QRDILNEKKKHEVYESQLN----ELKGELQTEISNSEHLSSQLSTLA-----AEKEAAVA 567
Query: 815 TCDSSDDNDDILENLCTYDMVPINKPEYPELEETIPQTGPLPVPIKALEQEQCRL 869
T + ++ + L+ LC + K +L+E L K L + L
Sbjct: 568 TNNELSESKNSLQTLCNAFQEKLAK-SVMQLKENEQNFSSLDTSFKKLNESHQEL 621
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 30.3 bits (65), Expect = 1.5
Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 452 DSDFDIKATEYLEL---LPKFENGTS-LENGQTMATKSLCLLNLLIRDEQRRARNLLYVL 507
D + E +EL L K +N S +E SL + L+ E+ A + +L
Sbjct: 823 DKQLKKRDAEIIELKYELKKQQNSKSEVERDLVETNNSLTAVENLLTTERAIALDKEEIL 882
Query: 508 KMREDALKDFTKSQILWLENKKKHENTDVSTLKKKQRGALLKLQHECGEMHRMRKALLTL 567
+ ++ L + S + E K+++EN + KQ + + E + + K L
Sbjct: 883 RRTQERLANIEDS---FSETKQQNENLQRESASLKQ----INNELESELLEKTSKVETLL 935
Query: 568 SEKRKDALIKTKKNIELKLKNNVDVEHLIEKKKLKRNGSDRNIVPLKC-FDLSSSGCEET 626
SE+ + K+ + L+ K+ +D + +E L+ N + ++ K F+ +ET
Sbjct: 936 SEQNE-----LKEKLSLEEKDLLDTKGELES--LRENNA--TVLSEKAEFNEQCKSLQET 986
Query: 627 LTSRS------TSEIAIRNTDIANVTSVSIKSAEKSIQTGDSILETL 667
+ ++ T I+ T+I + + K EKSIQ S+ E+L
Sbjct: 987 IVTKDAELDKLTKYISDYKTEIQEMRLTNQKMNEKSIQQEGSLSESL 1033
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 29.9 bits (64), Expect = 1.9
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 19/197 (9%)
Query: 431 LSNKCLSTNKVENLIKNPILYDSDFDIKATEYLELLPKFE-NGTSLENGQTMATKSLCLL 489
LS + ST K L+K + S + Y EL+ KF E + KS L
Sbjct: 433 LSKELASTEKAFRLVKQQTVKSSH-----SHYQELITKFSVEKEKAEQKYFLTMKSTDSL 487
Query: 490 NL---LIRDEQRRARNLLYVLKMREDA----LKDFTK--SQILWLENKKKHENTDVSTLK 540
+ L+R + ++ ++ + +D + +F +++ + N ++T K
Sbjct: 488 HAEVKLLRQKYQKTNEIISKMLNSQDTAVHRIIEFEDQLARLSSVRNNSIKQSTTFQVKK 547
Query: 541 KKQRGALLKLQHECGEMHR-MRKALLTLSEKRKDALIKTKKNIELKLKNNVDVEHLIEKK 599
Q+ + L+ + + + M K TL++ +I++ K D EH EK+
Sbjct: 548 SSQKSTIQNLEEKVSYLQQFMDKNNATLTDLEFQCS-DLSSSIDILSKQ--DEEHEKEKR 604
Query: 600 KLKRNGSDRNIVPLKCF 616
KLK G + LK F
Sbjct: 605 KLKDTGVSTSAEELKTF 621
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 688 NIIFHNLTLPQIFSNGKQYEVNEEALRNIVNSSNQNQLSGNEVVNNLMEQI 738
N N T I SN E N+E + N +N+S N+ + N ++ I
Sbjct: 234 NNAMQNRTTSNIKSNASAIEKNKETILNALNNSTLNENGHQDTQNEVLRDI 284
>SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 29.9 bits (64), Expect = 1.9
Identities = 40/197 (20%), Positives = 82/197 (41%), Gaps = 15/197 (7%)
Query: 580 KNIELKLKNNVDVEHLIEKKKLKRNGSDRNIVPLKCFDLSSSGCEETLTSRSTSEIAIRN 639
K E+ LKNN+ +E + E KL R+ + L + + T + E+
Sbjct: 67 KGNEIALKNNITLEKVFETVKLARDAGVTIPIILMGYYNPIFSYGDAKTIQKAKEVGANG 126
Query: 640 TDIANVT-SVSIKSAEKSIQTGDSILETLMTAPTDAAAENFVVVDGGYLNIIFH------ 692
I ++ ++ E+ + G S + + + TD E V ++ ++
Sbjct: 127 FIIVDLPPEEAVGFREECKKQGVSFVPLVAPSTTDRRMELLASVADSFIYVVSRMGSTGS 186
Query: 693 ------NLTLPQIFSNGKQYEVNEE-ALRNIVNSSNQNQLSGNEVVNNLMEQIQKGDIEM 745
N LPQ+ +++ + A+ VN+S G+ V + ++ + D+ +
Sbjct: 187 SATGVINTALPQLCQRVRKFAGDTPLAVGFGVNTSEHFHQVGS-VSDGVVVGSKIIDLIL 245
Query: 746 TSTPSTARSLVEEFDQY 762
+ P TA ++VEE+ +Y
Sbjct: 246 KAEPGTAATVVEEYCKY 262
>SPBC1778.07 |||methyltransferase N2227 family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 530 KHENTDVSTLKKKQRGALLKLQHECGEMHRMRKALLTLSEKRKDALIKTKKNIELKLKNN 589
+++ +V LK+ L Q+ + RK++ LS + KD L++ N LK +
Sbjct: 2 EYDEEEVKVLKEVLSAFFLYRQYAHTITQQKRKSMSRLSFEHKDLLLQDSDNNFLKHLSR 61
Query: 590 VDVEHLIEKKKLKRNGSDRNIVPLKCFDLSSS 621
+D IE+ + +P+ C D +
Sbjct: 62 ID--QCIEQNSVLAEAIANAAIPVFCSDFDQN 91
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 2/120 (1%)
Query: 137 ILKQTQNKPITIIHVPFEEKCETRRNEHKNVAPKRIQKTNTIDCGTDMRDFVYFEDVHIN 196
I K T N P I EE + + ++ P TN+ +++ F D +
Sbjct: 566 ISKVTTNGPSETISEDIEEILPSLESSERSSTP--FLNTNSASLKSEVVQLTTFSDFQLK 623
Query: 197 TEPLPPTVDRMTGMDEFDCSPVYKSMQSTDAQTELIKATFDSLEIPNVTLTKEHNKYQQS 256
+ L +D + + + S +Y S + + +D+L + +T + +QS
Sbjct: 624 LKTLQCVLDILQSLSNWAESGLYLSRRGVSTDEQGFVGDYDALSRSDTPVTNPYYNGKQS 683
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/71 (23%), Positives = 37/71 (52%)
Query: 529 KKHENTDVSTLKKKQRGALLKLQHECGEMHRMRKALLTLSEKRKDALIKTKKNIELKLKN 588
+K N ++ +++RGA + + + EM++ +L + ++ + +K I LK+K
Sbjct: 10 EKGGNPEIIRESQRKRGADVGVVDKVIEMYKEWVSLRFELDNTNKSINRVQKEIGLKMKA 69
Query: 589 NVDVEHLIEKK 599
D L+E+K
Sbjct: 70 KEDASELLEEK 80
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 29.1 bits (62), Expect = 3.4
Identities = 29/139 (20%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 445 IKNPILYDSDFDIKATEYLELLPKFENGTS-LENGQTMATKS--LCLLNLLIRDEQRRAR 501
I+NP+ + ++ Y+ + + +NG + LE T S NLL + ++ AR
Sbjct: 1201 IENPVAQERTLIVQTKRYILFIIRIQNGLNLLEILVKPVTDSDEAAWQNLLAEESEKNAR 1260
Query: 502 NL---------LYVLKMREDALKDFTKSQILWLENKKKHENTDVSTLKKKQRGALLKLQH 552
N + +++ AL + + + L N++ + V+++ R +
Sbjct: 1261 NYDLFDDSIFSMSFAELKYTALSNIVEMEKLGFANRRNNYQDMVNSIALDIRNKSRRRMQ 1320
Query: 553 ECGEMHRMRKALLTLSEKR 571
E+ ++LL L EKR
Sbjct: 1321 RQRELDAGHQSLLNLREKR 1339
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 426 LENCSLSNKCLSTNKVENLIKNPILYD--SDF-DIKATEYLELLPKFENGTSLENGQTMA 482
+E S + NKV N++K P L D +F DI A E LPK G E T
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 483 TKSLCLLNLLIRDEQRRARN 502
L + N + + +A N
Sbjct: 410 NYRLPIRNYPLPPGKMQAMN 429
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 161 RNEHKNVAPKRIQKTNTIDCGTDMRDFVYFEDVHINTEPLPPTVDRMTGMDEFDCSPVYK 220
++ H + + TNT TD+ F + +T P P ++ + S Y+
Sbjct: 191 QSSHTEASQGYMYSTNTAHDATDIPSSFNFYNTQASTAPNPQEIN-------YQWSHEYR 243
Query: 221 SMQSTDAQTELIKATFDSLEIPNVTLTKEHNKYQQSESLPNMKIPSMKTTSDQ 273
T Q L++A ++ N T + +QQ PN +PS T Q
Sbjct: 244 --PHTQYQNNLLRAQ-PNVNCENFPTTVPNYPFQQPSYNPNALVPSYTTLVSQ 293
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 426 LENCSLSNKCLSTNKVENLIKNPILYD--SDF-DIKATEYLELLPKFENGTSLENGQTMA 482
+E S + NKV N++K P L D +F DI A E LPK G E T
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 483 TKSLCLLNLLIRDEQRRARN 502
L + N + + +A N
Sbjct: 410 NYRLPIRNYPLPPGKMQAMN 429
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 426 LENCSLSNKCLSTNKVENLIKNPILYD--SDF-DIKATEYLELLPKFENGTSLENGQTMA 482
+E S + NKV N++K P L D +F DI A E LPK G E T
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 483 TKSLCLLNLLIRDEQRRARN 502
L + N + + +A N
Sbjct: 410 NYRLPIRNYPLPPGKMQAMN 429
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 426 LENCSLSNKCLSTNKVENLIKNPILYD--SDF-DIKATEYLELLPKFENGTSLENGQTMA 482
+E S + NKV N++K P L D +F DI A E LPK G E T
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 483 TKSLCLLNLLIRDEQRRARN 502
L + N + + +A N
Sbjct: 410 NYRLPIRNYPLPPGKMQAMN 429
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 426 LENCSLSNKCLSTNKVENLIKNPILYD--SDF-DIKATEYLELLPKFENGTSLENGQTMA 482
+E S + NKV N++K P L D +F DI A E LPK G E T
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 483 TKSLCLLNLLIRDEQRRARN 502
L + N + + +A N
Sbjct: 410 NYRLPIRNYPLPPGKMQAMN 429
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 426 LENCSLSNKCLSTNKVENLIKNPILYD--SDF-DIKATEYLELLPKFENGTSLENGQTMA 482
+E S + NKV N++K P L D +F DI A E LPK G E T
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 483 TKSLCLLNLLIRDEQRRARN 502
L + N + + +A N
Sbjct: 410 NYRLPIRNYPLPPGKMQAMN 429
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 426 LENCSLSNKCLSTNKVENLIKNPILYD--SDF-DIKATEYLELLPKFENGTSLENGQTMA 482
+E S + NKV N++K P L D +F DI A E LPK G E T
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 483 TKSLCLLNLLIRDEQRRARN 502
L + N + + +A N
Sbjct: 410 NYRLPIRNYPLPPGKMQAMN 429
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 426 LENCSLSNKCLSTNKVENLIKNPILYD--SDF-DIKATEYLELLPKFENGTSLENGQTMA 482
+E S + NKV N++K P L D +F DI A E LPK G E T
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 483 TKSLCLLNLLIRDEQRRARN 502
L + N + + +A N
Sbjct: 410 NYRLPIRNYPLPPGKMQAMN 429
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 426 LENCSLSNKCLSTNKVENLIKNPILYD--SDF-DIKATEYLELLPKFENGTSLENGQTMA 482
+E S + NKV N++K P L D +F DI A E LPK G E T
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 483 TKSLCLLNLLIRDEQRRARN 502
L + N + + +A N
Sbjct: 410 NYRLPIRNYPLPPGKMQAMN 429
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 426 LENCSLSNKCLSTNKVENLIKNPILYD--SDF-DIKATEYLELLPKFENGTSLENGQTMA 482
+E S + NKV N++K P L D +F DI A E LPK G E T
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 483 TKSLCLLNLLIRDEQRRARN 502
L + N + + +A N
Sbjct: 410 NYRLPIRNYPLPPGKMQAMN 429
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 426 LENCSLSNKCLSTNKVENLIKNPILYD--SDF-DIKATEYLELLPKFENGTSLENGQTMA 482
+E S + NKV N++K P L D +F DI A E LPK G E T
Sbjct: 350 IEISSSKHTLSQMNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQE 409
Query: 483 TKSLCLLNLLIRDEQRRARN 502
L + N + + +A N
Sbjct: 410 NYRLPIRNYPLPPGKMQAMN 429
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 40 YNSKKSNTKEKQSFDTTESNIKMRNLKDKDNIYNNRSTYSPVKINLSKNIVDTDENSKEL 99
Y + S++ + +S +T + + K NL DN ST K + SK ++++ +
Sbjct: 190 YGAVISDSDDDES-NTEQDHSKESNLNTADNDLALSSTIEGKKTSTSKEALESESLLSDS 248
Query: 100 DMAKTNI 106
D + TNI
Sbjct: 249 DQSMTNI 255
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 28.3 bits (60), Expect = 6.0
Identities = 31/153 (20%), Positives = 61/153 (39%), Gaps = 2/153 (1%)
Query: 693 NLTLPQIFSNGKQYEVNEEALRNIVNSSNQNQLSGNEVVNNLMEQIQKGDIEMT-STPST 751
NL+ FSNG + EEA N+ N N N N+L ++ D + ++
Sbjct: 371 NLSPVSHFSNGLDLQNLEEAPMNLTRPINANPHLTNHSPNDLTNGEEEMDTTSAFNIENS 430
Query: 752 ARSLVEEFDQYYKSFVEEEIQLNRPEREYKPPVVCEIEDKYVQVSLPKLAPIEPRSYQSA 811
+L+ +S E+ + L +P P ED Q + + +PR +
Sbjct: 431 HLTLLSPIRPSSRSMEEQIMDLTQPISSTNAPTHLN-EDDLNQFTSNISSSSKPRKDNNK 489
Query: 812 STMTCDSSDDNDDILENLCTYDMVPINKPEYPE 844
+ + D++D ++ ++++ +K E
Sbjct: 490 TANSSKPIPDSEDFMDITRPFNILSPSKEALSE 522
>SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 674
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 157 CETRRNEHKNVAPKRIQKTNTIDCGTDMRDFVYFEDVHINTEPLP 201
C+T H +V P + T ++ C T + + E++ +N P+P
Sbjct: 210 CKTLSKLHSHVTPHSLAYTQSVICKTYKVESI--EEIFVNFNPIP 252
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 27.9 bits (59), Expect = 7.9
Identities = 29/149 (19%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 624 EETLTSRSTSEIAIRNTDIANVTSVSIKSAEKSIQTGDSILETLMTAPTDAAAENFVVVD 683
E ++ +T + R + ++ +VS+ + +S+QT +S L T M + ++D
Sbjct: 778 ERSMGFENTIKDLTRKMEATDMLNVSLHESLRSVQTENSELVTEMALLKAELVKKQAIID 837
Query: 684 GGYLNIIFHNLTLPQIFSNGKQYEVNEEALRNIVNSSNQNQLSGNEVVNNLMEQIQKGDI 743
N I+ LT ++ YE + + + L+G+ N ++ I
Sbjct: 838 AN-AN-IYDKLT-----ADHTNYETVSADINQNLKETLDKLLNGSSDFKNNEIELLHDQI 890
Query: 744 EMTSTPSTARSLVEEFDQYYKSFVEEEIQ 772
+T+ R + +Y + + EIQ
Sbjct: 891 RITNAKLEKREKLINASKYIEDTLRSEIQ 919
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 27.9 bits (59), Expect = 7.9
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 507 LKMREDALKDFTKSQILWLENKKKHENTDVSTLKKKQRGALLKLQHECGEMHRMRKALLT 566
L+ +A + K LWL+N EN ++ L ++ + LKL+ ++ R +
Sbjct: 293 LEFENEAHQYEIKGYRLWLQNILNRENCQITKLDFEREFSQLKLK----DLLDSRDSGKR 348
Query: 567 LSEKRKDALIKTKKNIELKLKNNVDVEHLIEKKKLKRNGSDRNIVPLKCFDLSSSGCEET 626
S K+ + + +LKL+ D L ++ +++N ++R+ DL C+ET
Sbjct: 349 KSRKKNAKTLNPFETAQLKLEFTFD--GLCIRRTIEQNATERS------EDLLLKFCKET 400
Query: 627 LTSRSTSE 634
+ +S+
Sbjct: 401 IVPYYSSK 408
>SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr
2|||Manual
Length = 539
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/70 (18%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 556 EMHRMRKAL-LTLSEKRKDALIKTKKNIELKLKNNVDVEHLIEKKKLKRNGSDRNIVPLK 614
E+ R R+ + + +++++ + ++N+ L+N++DVE ++ +++ ++ P
Sbjct: 23 ELRRQREEQQIEIRKQKREESLNKRRNLNAVLQNDIDVEEEADQSQVQMEQQMKDEFPKL 82
Query: 615 CFDLSSSGCE 624
D+ S E
Sbjct: 83 TADVMSDDIE 92
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.129 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,703,133
Number of Sequences: 5004
Number of extensions: 205820
Number of successful extensions: 643
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 623
Number of HSP's gapped (non-prelim): 52
length of query: 1054
length of database: 2,362,478
effective HSP length: 80
effective length of query: 974
effective length of database: 1,962,158
effective search space: 1911141892
effective search space used: 1911141892
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
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